RNA–Protein interactions for RNA: ENST00000503274.1

NIPBL-203, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 789 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-203ENST00000503274 LGI3Q8N145 548 aa3.05□□□□□ -1.92
NIPBL-203ENST00000503274 DTD1Q8TEA8 209 aa3.05□□□□□ -1.92
NIPBL-203ENST00000503274 RAB2BQ8WUD1 216 aa3.05□□□□□ -1.92
NIPBL-203ENST00000503274 SMIM4Q8WVI0 70 aa3.05□□□□□ -1.92
NIPBL-203ENST00000503274 PPP1R14BQ96C90 147 aa3.05□□□□□ -1.92
NIPBL-203ENST00000503274 GPR146Q96CH1 333 aa3.05□□□□□ -1.92
NIPBL-203ENST00000503274 ACY3Q96HD9 319 aa3.05□□□□□ -1.92
NIPBL-203ENST00000503274 BCL7BQ9BQE9 202 aa3.05□□□□□ -1.92
NIPBL-203ENST00000503274 MRPS26Q9BYN8 205 aaKnown RBP3.05□□□□□ -1.92
NIPBL-203ENST00000503274 MCUBQ9NWR8 336 aa3.05□□□□□ -1.92
NIPBL-203ENST00000503274 TMEM56-RWDD3S4R434 201 aa3.05□□□□□ -1.92
NIPBL-203ENST00000503274 DUXBA0A1W2PPF3 345 aa3.04□□□□□ -1.92
NIPBL-203ENST00000503274 ANKRD20A5PA0PJZ0 165 aa3.04□□□□□ -1.92
NIPBL-203ENST00000503274 FABP12A6NFH5 140 aa3.04□□□□□ -1.92
NIPBL-203ENST00000503274 SMIM9A6NGZ8 99 aa3.04□□□□□ -1.92
NIPBL-203ENST00000503274 KNCNA6PVL3 124 aa3.04□□□□□ -1.92
NIPBL-203ENST00000503274 SPART-AS1P0CW21 52 aa3.04□□□□□ -1.92
NIPBL-203ENST00000503274 P0DMU3 169 aa3.04□□□□□ -1.92
NIPBL-203ENST00000503274 FAM231AP0DMU4 169 aa3.04□□□□□ -1.92
NIPBL-203ENST00000503274 FAM231CP0DMU5 169 aa3.04□□□□□ -1.92
NIPBL-203ENST00000503274 HLA-DMBP28068 263 aa3.04□□□□□ -1.92
NIPBL-203ENST00000503274 ZNF138P52744 262 aa3.04□□□□□ -1.92
NIPBL-203ENST00000503274 TMBIM6P55061 237 aa3.04□□□□□ -1.92
NIPBL-203ENST00000503274 PLP1P60201 277 aa3.04□□□□□ -1.92
NIPBL-203ENST00000503274 SMCO1Q147U7 214 aa3.04□□□□□ -1.92
NIPBL-203ENST00000503274 NMSQ5H8A3 153 aa3.04□□□□□ -1.92
NIPBL-203ENST00000503274 EBLN2Q6P2I7 272 aa3.04□□□□□ -1.92
NIPBL-203ENST00000503274 LINC00336Q6ZUF6 198 aa3.04□□□□□ -1.92
NIPBL-203ENST00000503274 OR8I2Q8N0Y5 310 aa3.04□□□□□ -1.92
NIPBL-203ENST00000503274 RPP25LQ8N5L8 163 aaKnown RBP3.04□□□□□ -1.92
NIPBL-203ENST00000503274 FAM24BQ8N5W8 94 aa3.04□□□□□ -1.92
NIPBL-203ENST00000503274 Q8NAQ8 132 aa3.04□□□□□ -1.92
NIPBL-203ENST00000503274 OR4C16Q8NGL9 310 aa3.04□□□□□ -1.92
NIPBL-203ENST00000503274 OR10J6PQ8NGY7 276 aa3.04□□□□□ -1.92
NIPBL-203ENST00000503274 OR1S1Q8NH92 325 aa3.04□□□□□ -1.92
NIPBL-203ENST00000503274 COQ8AQ8NI60 647 aa3.04□□□□□ -1.92
NIPBL-203ENST00000503274 DCANP1Q8TF63 244 aa3.04□□□□□ -1.92
NIPBL-203ENST00000503274 LINC00052Q96N35 136 aa3.04□□□□□ -1.92
NIPBL-203ENST00000503274 CIB3Q96Q77 187 aaPredicted RBP3.04□□□□□ -1.92
NIPBL-203ENST00000503274 PBDC1Q9BVG4 233 aa3.04□□□□□ -1.92
NIPBL-203ENST00000503274 SAV1Q9H4B6 383 aaPredicted RBP3.04□□□□□ -1.92
NIPBL-203ENST00000503274 PAIP2BQ9ULR5 123 aaKnown RBP3.04□□□□□ -1.92
NIPBL-203ENST00000503274 DNAH17Q9UFH2 4485 aa3.04□□□□□ -1.92
NIPBL-203ENST00000503274 DNAH2Q9P225 4427 aa3.04□□□□□ -1.92
NIPBL-203ENST00000503274 DEFB131BA0A096LNP1 70 aa3.03□□□□□ -1.92
NIPBL-203ENST00000503274 H3BMM0 161 aa3.03□□□□□ -1.92
NIPBL-203ENST00000503274 ISLRO14498 428 aa3.03□□□□□ -1.92
NIPBL-203ENST00000503274 MRPS12O15235 138 aaKnown RBP3.03□□□□□ -1.92
NIPBL-203ENST00000503274 DEDDO75618 318 aa3.03□□□□□ -1.92
NIPBL-203ENST00000503274 IFNA21P01568 189 aa3.03□□□□□ -1.92
NIPBL-203ENST00000503274 SLC25A6P12236 298 aa3.03□□□□□ -1.92
NIPBL-203ENST00000503274 HLA-DRB4P13762 266 aa3.03□□□□□ -1.92
NIPBL-203ENST00000503274 S100A5P33763 92 aa3.03□□□□□ -1.92
NIPBL-203ENST00000503274 GALR1P47211 349 aa3.03□□□□□ -1.92
NIPBL-203ENST00000503274 PSMB3P49720 205 aa3.03□□□□□ -1.92
NIPBL-203ENST00000503274 SUPT4H1P63272 117 aaKnown RBP3.03□□□□□ -1.92
NIPBL-203ENST00000503274 RBMY1FQ15415 496 aaKnown RBP3.03□□□□□ -1.92
NIPBL-203ENST00000503274 USF2Q15853 346 aaPredicted RBP3.03□□□□□ -1.92
NIPBL-203ENST00000503274 TMEM128Q5BJH2 165 aa3.03□□□□□ -1.92
NIPBL-203ENST00000503274 SOHLH1Q5JUK2 328 aa3.03□□□□□ -1.92
NIPBL-203ENST00000503274 FOXI2Q6ZQN5 318 aa3.03□□□□□ -1.92
NIPBL-203ENST00000503274 TOMM5Q8N4H5 51 aa3.03□□□□□ -1.92
NIPBL-203ENST00000503274 ARL6IP6Q8N6S5 226 aa3.03□□□□□ -1.92
NIPBL-203ENST00000503274 BPIFCQ8NFQ6 507 aa3.03□□□□□ -1.92
NIPBL-203ENST00000503274 LHFPL5Q8TAF8 219 aa3.03□□□□□ -1.92
NIPBL-203ENST00000503274 GPR82Q96P67 336 aa3.03□□□□□ -1.92
NIPBL-203ENST00000503274 SLC25A21Q9BQT8 299 aaPredicted RBP3.03□□□□□ -1.92
NIPBL-203ENST00000503274 C7orf50Q9BRJ6 194 aaKnown RBP3.03□□□□□ -1.92
NIPBL-203ENST00000503274 TMEM208Q9BTX3 173 aa3.03□□□□□ -1.92
NIPBL-203ENST00000503274 NAA50Q9GZZ1 169 aaKnown RBP3.03□□□□□ -1.92
NIPBL-203ENST00000503274 MIXL1Q9H2W2 232 aa3.03□□□□□ -1.92
NIPBL-203ENST00000503274 RPRMQ9NS64 109 aa3.03□□□□□ -1.92
NIPBL-203ENST00000503274 CCDC59Q9P031 241 aaKnown RBP3.03□□□□□ -1.92
NIPBL-203ENST00000503274 MRPL36Q9P0J6 103 aaKnown RBP3.03□□□□□ -1.92
NIPBL-203ENST00000503274 APLNQ9ULZ1 77 aa3.03□□□□□ -1.92
NIPBL-203ENST00000503274 GOLT1BQ9Y3E0 138 aa3.03□□□□□ -1.92
NIPBL-203ENST00000503274 HLA-DRB4X5D2U9 266 aa3.03□□□□□ -1.92
NIPBL-203ENST00000503274 WRBO00258 174 aa3.02□□□□□ -1.93
NIPBL-203ENST00000503274 HBE1P02100 147 aa3.02□□□□□ -1.93
NIPBL-203ENST00000503274 INPP1P49441 399 aa3.02□□□□□ -1.93
NIPBL-203ENST00000503274 EMP1P54849 157 aa3.02□□□□□ -1.93
NIPBL-203ENST00000503274 B2MP61769 119 aa3.02□□□□□ -1.93
NIPBL-203ENST00000503274 PSG9Q00887 426 aa3.02□□□□□ -1.93
NIPBL-203ENST00000503274 SPCS2Q15005 226 aa3.02□□□□□ -1.93
NIPBL-203ENST00000503274 PYDC2Q56P42 97 aa3.02□□□□□ -1.93
NIPBL-203ENST00000503274 LYZL2Q7Z4W2 148 aa3.02□□□□□ -1.93
NIPBL-203ENST00000503274 TMED4Q7Z7H5 227 aa3.02□□□□□ -1.93
NIPBL-203ENST00000503274 UBE2DNLQ8IWF7 75 aa3.02□□□□□ -1.93
NIPBL-203ENST00000503274 OR4B1Q8NGF8 309 aa3.02□□□□□ -1.93
NIPBL-203ENST00000503274 MCFD2Q8NI22 146 aa3.02□□□□□ -1.93
NIPBL-203ENST00000503274 DYNC2LI1Q8TCX1 351 aa3.02□□□□□ -1.93
NIPBL-203ENST00000503274 TRGV9Q99603 122 aa3.02□□□□□ -1.93
NIPBL-203ENST00000503274 TMEM147Q9BVK8 224 aa3.02□□□□□ -1.93
NIPBL-203ENST00000503274 PKHD1P08F94 4074 aa3.02□□□□□ -1.93
NIPBL-203ENST00000503274 CCDC160A6NGH7 325 aa3.01□□□□□ -1.93
NIPBL-203ENST00000503274 CENPXA8MT69 81 aa3.01□□□□□ -1.93
NIPBL-203ENST00000503274 ZNF705FA8MVS1 300 aaPredicted RBP3.01□□□□□ -1.93
NIPBL-203ENST00000503274 SYNGR2O43760 224 aa3.01□□□□□ -1.93
NIPBL-203ENST00000503274 ZNF705DP0CH99 300 aaPredicted RBP3.01□□□□□ -1.93
NIPBL-203ENST00000503274 ZNF705BP0CI00 300 aaPredicted RBP3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms