RNA–Protein interactions for RNA: ENST00000498967.3

AC055713.1-201, humanhuman

TSL 2 BASIC

Gene AC055713.1, Length 8,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055713.1-201ENST00000498967 PAX9P55771 341 aa9.02□□□□□ -0.97
AC055713.1-201ENST00000498967 SPINK13Q1W4C9 94 aa9.02□□□□□ -0.97
AC055713.1-201ENST00000498967 IGKV3D-7A0A0C4DH55 119 aa9.02□□□□□ -0.97
AC055713.1-201ENST00000498967 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.02□□□□□ -0.97
AC055713.1-201ENST00000498967 LINC01619G3V211 115 aa9.02□□□□□ -0.97
AC055713.1-201ENST00000498967 TEX36Q5VZQ5 186 aa9.02□□□□□ -0.97
AC055713.1-201ENST00000498967 LINC00527Q9UJ94 153 aa9.02□□□□□ -0.97
AC055713.1-201ENST00000498967 TRBV19A0A075B6N1 114 aa9.02□□□□□ -0.97
AC055713.1-201ENST00000498967 TRAV4A0A0B4J268 109 aa9.02□□□□□ -0.97
AC055713.1-201ENST00000498967 PRB1P04280 392 aa9.02□□□□□ -0.97
AC055713.1-201ENST00000498967 ICOSQ9Y6W8 199 aa9.02□□□□□ -0.97
AC055713.1-201ENST00000498967 IGKV1D-13A0A0B4J2D9 117 aa9.01□□□□□ -0.97
AC055713.1-201ENST00000498967 IGKV1-13P0DP09 117 aa9.01□□□□□ -0.97
AC055713.1-201ENST00000498967 POLR3KQ9Y2Y1 108 aaPredicted RBP9.01□□□□□ -0.97
AC055713.1-201ENST00000498967 FAM236DA0A1B0GTK5 79 aa9.01□□□□□ -0.97
AC055713.1-201ENST00000498967 C5orf63A6NC05 138 aa9.01□□□□□ -0.97
AC055713.1-201ENST00000498967 FAM236CP0DP71 79 aa9.01□□□□□ -0.97
AC055713.1-201ENST00000498967 MRPL53Q96EL3 112 aaKnown RBP9.01□□□□□ -0.97
AC055713.1-201ENST00000498967 LENEPQ9Y5L5 61 aa9.01□□□□□ -0.97
AC055713.1-201ENST00000498967 THSD7AQ9UPZ6 1657 aa9.01□□□□□ -0.97
AC055713.1-201ENST00000498967 LINC00643Q86TS7 51 aa9.01□□□□□ -0.97
AC055713.1-201ENST00000498967 CHCHD2Q9Y6H1 151 aaPredicted RBP9.01□□□□□ -0.97
AC055713.1-201ENST00000498967 NOTCH4Q99466 2003 aa9.01□□□□□ -0.97
AC055713.1-201ENST00000498967 TLN1Q9Y490 2541 aaKnown RBP9.01□□□□□ -0.97
AC055713.1-201ENST00000498967 MRPL23Q16540 153 aaKnown RBP9.01□□□□□ -0.97
AC055713.1-201ENST00000498967 TFF2Q03403 129 aa9□□□□□ -0.97
AC055713.1-201ENST00000498967 FAM231DQ6ZW35 169 aa9□□□□□ -0.97
AC055713.1-201ENST00000498967 SAP25Q8TEE9 199 aa9□□□□□ -0.97
AC055713.1-201ENST00000498967 NYNRINQ9P2P1 1898 aaKnown RBP9□□□□□ -0.97
AC055713.1-201ENST00000498967 H0YJW9 148 aa9□□□□□ -0.97
AC055713.1-201ENST00000498967 MRPL51Q4U2R6 128 aaKnown RBP9□□□□□ -0.97
AC055713.1-201ENST00000498967 DIRC1Q969H9 104 aa9□□□□□ -0.97
AC055713.1-201ENST00000498967 IGKV1OR2-108A0A075B7D4 117 aa9□□□□□ -0.97
AC055713.1-201ENST00000498967 IGLV3-21P80748 117 aaPredicted RBP9□□□□□ -0.97
AC055713.1-201ENST00000498967 NDUFA1O15239 70 aa9□□□□□ -0.97
AC055713.1-201ENST00000498967 SMIM10L1P0DMW3 83 aa9□□□□□ -0.97
AC055713.1-201ENST00000498967 MPLKIPQ8TAP9 179 aa9□□□□□ -0.97
AC055713.1-201ENST00000498967 SMIM10Q96HG1 83 aa9□□□□□ -0.97
AC055713.1-201ENST00000498967 FAM201AQ5SY85 155 aa9□□□□□ -0.97
AC055713.1-201ENST00000498967 ATG2AQ2TAZ0 1938 aa9□□□□□ -0.97
AC055713.1-201ENST00000498967 SLC22A18ASQ8N1D0 253 aa9□□□□□ -0.97
AC055713.1-201ENST00000498967 FAM110AQ9BQ89 295 aa9□□□□□ -0.97
AC055713.1-201ENST00000498967 ATP6V0E2Q8NHE4 81 aa8.99□□□□□ -0.97
AC055713.1-201ENST00000498967 COL5A3P25940 1745 aaPredicted RBP8.99□□□□□ -0.97
AC055713.1-201ENST00000498967 ZNF672Q499Z4 452 aaPredicted RBP8.99□□□□□ -0.97
AC055713.1-201ENST00000498967 TMEM200BQ69YZ2 307 aa8.99□□□□□ -0.97
AC055713.1-201ENST00000498967 SRSF3P84103 164 aaKnown RBP8.99□□□□□ -0.97
AC055713.1-201ENST00000498967 ZNF831Q5JPB2 1677 aa8.99□□□□□ -0.97
AC055713.1-201ENST00000498967 PATE3B3GLJ2 98 aa8.99□□□□□ -0.97
AC055713.1-201ENST00000498967 VWA8A3KMH1 1905 aa8.98□□□□□ -0.97
AC055713.1-201ENST00000498967 NDUFS6O75380 124 aaKnown RBP8.98□□□□□ -0.97
AC055713.1-201ENST00000498967 TMEM61Q8N0U2 210 aa8.98□□□□□ -0.97
AC055713.1-201ENST00000498967 RNF185Q96GF1 192 aa8.98□□□□□ -0.97
AC055713.1-201ENST00000498967 IGHV3-16A0A0C4DH30 117 aa8.98□□□□□ -0.97
AC055713.1-201ENST00000498967 A4D1N5 150 aa8.98□□□□□ -0.97
AC055713.1-201ENST00000498967 NPSP0C0P6 89 aa8.98□□□□□ -0.97
AC055713.1-201ENST00000498967 GATA4P43694 442 aa8.98□□□□□ -0.97
AC055713.1-201ENST00000498967 LCTP09848 1927 aa8.98□□□□□ -0.97
AC055713.1-201ENST00000498967 A0A0U1RQV1 116 aa8.98□□□□□ -0.97
AC055713.1-201ENST00000498967 IGLC7A0M8Q6 106 aa8.98□□□□□ -0.97
AC055713.1-201ENST00000498967 OVOL3O00110 214 aa8.98□□□□□ -0.97
AC055713.1-201ENST00000498967 IGKV1-39P01597 117 aa8.98□□□□□ -0.97
AC055713.1-201ENST00000498967 IGKV1D-39P04432 117 aa8.98□□□□□ -0.97
AC055713.1-201ENST00000498967 LY6G6FQ5SQ64 297 aa8.98□□□□□ -0.97
AC055713.1-201ENST00000498967 TRBV6-6A0A0A6YYG2 114 aa8.98□□□□□ -0.97
AC055713.1-201ENST00000498967 PRSS57Q6UWY2 283 aa8.97□□□□□ -0.97
AC055713.1-201ENST00000498967 AMTNQ6UX39 209 aa8.97□□□□□ -0.97
AC055713.1-201ENST00000498967 CFHR3Q02985 330 aa8.97□□□□□ -0.97
AC055713.1-201ENST00000498967 TMEM14CQ9P0S9 112 aa8.97□□□□□ -0.97
AC055713.1-201ENST00000498967 DEFB104AQ8WTQ1 72 aa8.97□□□□□ -0.97
AC055713.1-201ENST00000498967 CRYGSP22914 178 aa8.97□□□□□ -0.97
AC055713.1-201ENST00000498967 FANCD2OSQ96PS1 177 aa8.96□□□□□ -0.97
AC055713.1-201ENST00000498967 LY75O60449 1722 aa8.96□□□□□ -0.97
AC055713.1-201ENST00000498967 FRMPD3Q5JV73 1810 aa8.96□□□□□ -0.97
AC055713.1-201ENST00000498967 K7ERJ3 54 aa8.96□□□□□ -0.97
AC055713.1-201ENST00000498967 CSRP3P50461 194 aa8.96□□□□□ -0.97
AC055713.1-201ENST00000498967 C8orf86Q6ZUL3 223 aa8.96□□□□□ -0.97
AC055713.1-201ENST00000498967 IL17DQ8TAD2 202 aa8.96□□□□□ -0.98
AC055713.1-201ENST00000498967 FGF23Q9GZV9 251 aaPredicted RBP8.96□□□□□ -0.98
AC055713.1-201ENST00000498967 DKK2Q9UBU2 259 aa8.96□□□□□ -0.98
AC055713.1-201ENST00000498967 IGLL1P15814 213 aa8.96□□□□□ -0.98
AC055713.1-201ENST00000498967 SERP2Q8N6R1 65 aa8.96□□□□□ -0.98
AC055713.1-201ENST00000498967 PRR25Q96S07 402 aa8.96□□□□□ -0.98
AC055713.1-201ENST00000498967 CYTL1Q9NRR1 136 aa8.96□□□□□ -0.98
AC055713.1-201ENST00000498967 IGHV4-4A0A075B6R2 117 aa8.96□□□□□ -0.98
AC055713.1-201ENST00000498967 Q8N9L7 120 aa8.96□□□□□ -0.98
AC055713.1-201ENST00000498967 Q9HAA7 133 aa8.96□□□□□ -0.98
AC055713.1-201ENST00000498967 SHANK3Q9BYB0 1731 aa8.95□□□□□ -0.98
AC055713.1-201ENST00000498967 LGALS9O00182 355 aa8.95□□□□□ -0.98
AC055713.1-201ENST00000498967 SAA4P35542 130 aa8.95□□□□□ -0.98
AC055713.1-201ENST00000498967 IGHV4OR15-8A0A075B7B6 117 aa8.95□□□□□ -0.98
AC055713.1-201ENST00000498967 A0A087WW49 117 aa8.95□□□□□ -0.98
AC055713.1-201ENST00000498967 IGHV1-46P01743 117 aa8.95□□□□□ -0.98
AC055713.1-201ENST00000498967 GFI1Q99684 422 aa8.95□□□□□ -0.98
AC055713.1-201ENST00000498967 NAV2Q8IVL1 2488 aa8.95□□□□□ -0.98
AC055713.1-201ENST00000498967 CELA3BP08861 270 aa8.95□□□□□ -0.98
AC055713.1-201ENST00000498967 C1orf195Q5TG92 126 aa8.95□□□□□ -0.98
AC055713.1-201ENST00000498967 IGHV2-70DA0A0C4DH43 119 aa8.95□□□□□ -0.98
AC055713.1-201ENST00000498967 LOC101059948A0A1B0GTJ6 334 aa8.95□□□□□ -0.98
AC055713.1-201ENST00000498967 CSRP2Q16527 193 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms