RNA–Protein interactions for RNA: ENST00000498725.5

CCDC171-209, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-209ENST00000498725 ASIPP42127 132 aa5.96□□□□□ -1.46
CCDC171-209ENST00000498725 RPL29P47914 159 aaKnown RBP5.96□□□□□ -1.46
CCDC171-209ENST00000498725 ZNF266Q14584 549 aa5.96□□□□□ -1.46
CCDC171-209ENST00000498725 LAGE3Q14657 143 aa5.96□□□□□ -1.46
CCDC171-209ENST00000498725 ACOT6Q3I5F7 207 aaPredicted RBP5.96□□□□□ -1.46
CCDC171-209ENST00000498725 MIR17HGQ75NE6 70 aa5.96□□□□□ -1.46
CCDC171-209ENST00000498725 ATP6V0E2Q8NHE4 81 aa5.96□□□□□ -1.46
CCDC171-209ENST00000498725 PHYHIPLQ96FC7 376 aa5.96□□□□□ -1.46
CCDC171-209ENST00000498725 PRADC1Q9BSG0 188 aa5.96□□□□□ -1.46
CCDC171-209ENST00000498725 SLC25A2Q9BXI2 301 aa5.96□□□□□ -1.46
CCDC171-209ENST00000498725 C20orf85Q9H1P6 137 aa5.96□□□□□ -1.46
CCDC171-209ENST00000498725 RPH3ALQ9UNE2 315 aa5.96□□□□□ -1.46
CCDC171-209ENST00000498725 WDR83OSQ9Y284 106 aa5.96□□□□□ -1.46
CCDC171-209ENST00000498725 FAM25EA8MYX2 175 aa5.95□□□□□ -1.46
CCDC171-209ENST00000498725 GGTLC3B5MD39 225 aa5.95□□□□□ -1.46
CCDC171-209ENST00000498725 MT1HL1P0DM35 61 aa5.95□□□□□ -1.46
CCDC171-209ENST00000498725 CSN1S1P47710 185 aa5.95□□□□□ -1.46
CCDC171-209ENST00000498725 VWC2Q2TAL6 325 aa5.95□□□□□ -1.46
CCDC171-209ENST00000498725 TDRG1Q3Y452 100 aa5.95□□□□□ -1.46
CCDC171-209ENST00000498725 Q8N976 141 aa5.95□□□□□ -1.46
CCDC171-209ENST00000498725 GTSF1LQ9H1H1 148 aa5.95□□□□□ -1.46
CCDC171-209ENST00000498725 GAGE12JA6NER3 117 aa5.94□□□□□ -1.46
CCDC171-209ENST00000498725 F6UZH7 168 aa5.94□□□□□ -1.46
CCDC171-209ENST00000498725 TYMSP04818 313 aa5.94□□□□□ -1.46
CCDC171-209ENST00000498725 RANP62826 216 aaKnown RBP5.94□□□□□ -1.46
CCDC171-209ENST00000498725 GAGE1Q13065 139 aa5.94□□□□□ -1.46
CCDC171-209ENST00000498725 GAGE4Q13068 117 aa5.94□□□□□ -1.46
CCDC171-209ENST00000498725 GAGE5Q13069 117 aa5.94□□□□□ -1.46
CCDC171-209ENST00000498725 RHOHQ15669 191 aa5.94□□□□□ -1.46
CCDC171-209ENST00000498725 GAGE13Q4V321 117 aa5.94□□□□□ -1.46
CCDC171-209ENST00000498725 Q6AWC8 147 aa5.94□□□□□ -1.46
CCDC171-209ENST00000498725 HYLS1Q96M11 299 aa5.94□□□□□ -1.46
CCDC171-209ENST00000498725 PAXXQ9BUH6 204 aa5.94□□□□□ -1.46
CCDC171-209ENST00000498725 OR51M1Q9H341 326 aa5.94□□□□□ -1.46
CCDC171-209ENST00000498725 RNF222A6NCQ9 220 aa5.93□□□□□ -1.46
CCDC171-209ENST00000498725 OR7C2O60412 319 aa5.93□□□□□ -1.46
CCDC171-209ENST00000498725 INPP1P49441 399 aa5.93□□□□□ -1.46
CCDC171-209ENST00000498725 S100A10P60903 97 aa5.93□□□□□ -1.46
CCDC171-209ENST00000498725 ASAH1Q13510 395 aa5.93□□□□□ -1.46
CCDC171-209ENST00000498725 ZNF876PQ49A33 203 aa5.93□□□□□ -1.46
CCDC171-209ENST00000498725 CFAP126Q5VTH2 177 aa5.93□□□□□ -1.46
CCDC171-209ENST00000498725 DPPA3Q6W0C5 159 aa5.93□□□□□ -1.46
CCDC171-209ENST00000498725 FAM167A-AS1Q96KT0 104 aa5.93□□□□□ -1.46
CCDC171-209ENST00000498725 SLIRPQ9GZT3 109 aaKnown RBP5.93□□□□□ -1.46
CCDC171-209ENST00000498725 V9GYH0 126 aa5.93□□□□□ -1.46
CCDC171-209ENST00000498725 TRBV7-9A0A0J9YWB2 115 aa5.92□□□□□ -1.46
CCDC171-209ENST00000498725 TRBV6-4A0A1B0GX49 114 aa5.92□□□□□ -1.46
CCDC171-209ENST00000498725 IGSF23A1L1A6 192 aa5.92□□□□□ -1.46
CCDC171-209ENST00000498725 NDUFB6O95139 128 aa5.92□□□□□ -1.46
CCDC171-209ENST00000498725 ODF1Q14990 250 aa5.92□□□□□ -1.46
CCDC171-209ENST00000498725 TOR2AQ5JU69 321 aa5.92□□□□□ -1.46
CCDC171-209ENST00000498725 THAP6Q8TBB0 222 aa5.92□□□□□ -1.46
CCDC171-209ENST00000498725 FXYD5Q96DB9 178 aa5.92□□□□□ -1.46
CCDC171-209ENST00000498725 RMI2Q96E14 147 aa5.92□□□□□ -1.46
CCDC171-209ENST00000498725 ATP5SQ99766 215 aa5.92□□□□□ -1.46
CCDC171-209ENST00000498725 MRPS26Q9BYN8 205 aaKnown RBP5.92□□□□□ -1.46
CCDC171-209ENST00000498725 SDF2L1Q9HCN8 221 aa5.92□□□□□ -1.46
CCDC171-209ENST00000498725 KLK12Q9UKR0 248 aa5.92□□□□□ -1.46
CCDC171-209ENST00000498725 URGCP-MRPS24S4R325 110 aa5.92□□□□□ -1.46
CCDC171-209ENST00000498725 RBAKDNA6NC62 111 aa5.91□□□□□ -1.46
CCDC171-209ENST00000498725 DIRC3C9JPN6 131 aa5.91□□□□□ -1.46
CCDC171-209ENST00000498725 EIF3GO75821 320 aaKnown RBP eCLIP5.91□□□□□ -1.46
CCDC171-209ENST00000498725 S100A11P31949 105 aa5.91□□□□□ -1.46
CCDC171-209ENST00000498725 ASB13Q8WXK3 278 aa5.91□□□□□ -1.46
CCDC171-209ENST00000498725 UBE2WQ96B02 151 aa5.91□□□□□ -1.46
CCDC171-209ENST00000498725 BCL7BQ9BQE9 202 aa5.91□□□□□ -1.46
CCDC171-209ENST00000498725 NPCDR1Q9BY65 106 aa5.91□□□□□ -1.46
CCDC171-209ENST00000498725 COX11Q9Y6N1 276 aa5.91□□□□□ -1.46
CCDC171-209ENST00000498725 TRAV8-1A0A0A6YYK1 113 aa5.9□□□□□ -1.46
CCDC171-209ENST00000498725 TRAV21A0A0B4J279 112 aa5.9□□□□□ -1.46
CCDC171-209ENST00000498725 PGPEP1LA6NFU8 196 aa5.9□□□□□ -1.46
CCDC171-209ENST00000498725 NOL3O60936 208 aaKnown RBP5.9□□□□□ -1.46
CCDC171-209ENST00000498725 PVALBP20472 110 aaPredicted RBP5.9□□□□□ -1.46
CCDC171-209ENST00000498725 SULT1A1P50225 295 aa5.9□□□□□ -1.46
CCDC171-209ENST00000498725 UBE2L3P68036 154 aaKnown RBP5.9□□□□□ -1.46
CCDC171-209ENST00000498725 HBG1P69891 147 aa5.9□□□□□ -1.46
CCDC171-209ENST00000498725 HBG2P69892 147 aa5.9□□□□□ -1.46
CCDC171-209ENST00000498725 SPANXN2Q5MJ10 180 aa5.9□□□□□ -1.46
CCDC171-209ENST00000498725 STX12Q86Y82 276 aa5.9□□□□□ -1.46
CCDC171-209ENST00000498725 OR2T35Q8NGX2 323 aa5.9□□□□□ -1.46
CCDC171-209ENST00000498725 SGK494Q96LW2 274 aa5.9□□□□□ -1.46
CCDC171-209ENST00000498725 NMES1Q9C002 83 aa5.9□□□□□ -1.46
CCDC171-209ENST00000498725 C11orf1Q9H5F2 150 aa5.9□□□□□ -1.46
CCDC171-209ENST00000498725 Q9UF83 564 aa5.9□□□□□ -1.46
CCDC171-209ENST00000498725 RNF213Q63HN8 5207 aa5.89□□□□□ -1.47
CCDC171-209ENST00000498725 H3BMQ9 156 aa5.89□□□□□ -1.47
CCDC171-209ENST00000498725 MGST1P10620 155 aaKnown RBP5.89□□□□□ -1.47
CCDC171-209ENST00000498725 S100A5P33763 92 aa5.89□□□□□ -1.47
CCDC171-209ENST00000498725 TMBIM6P55061 237 aa5.89□□□□□ -1.47
CCDC171-209ENST00000498725 ZNF506Q5JVG8 444 aa5.89□□□□□ -1.47
CCDC171-209ENST00000498725 GOLT1AQ6ZVE7 132 aa5.89□□□□□ -1.47
CCDC171-209ENST00000498725 TMEM252Q8N6L7 170 aa5.89□□□□□ -1.47
CCDC171-209ENST00000498725 TMEM75Q8N9X5 138 aa5.89□□□□□ -1.47
CCDC171-209ENST00000498725 MITD1Q8WV92 249 aa5.89□□□□□ -1.47
CCDC171-209ENST00000498725 TVP23CQ96ET8 276 aa5.89□□□□□ -1.47
CCDC171-209ENST00000498725 KCNS1Q96KK3 526 aa5.89□□□□□ -1.47
CCDC171-209ENST00000498725 SAMD10Q9BYL1 202 aa5.89□□□□□ -1.47
CCDC171-209ENST00000498725 DPH3P1Q9H4G8 78 aa5.89□□□□□ -1.47
CCDC171-209ENST00000498725 TREM1Q9NP99 234 aa5.89□□□□□ -1.47
CCDC171-209ENST00000498725 LENEPQ9Y5L5 61 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms