RNA–Protein interactions for RNA: ENST00000498689.5

CSTF1-207, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 1 (best)

Gene CSTF1, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-207ENST00000498689 NAGKQ9UJ70 344 aa2.33□□□□□ -2.04
CSTF1-207ENST00000498689 RRP15Q9Y3B9 282 aaKnown RBP2.33□□□□□ -2.04
CSTF1-207ENST00000498689 IGKV2-40A0A087WW87 121 aaPredicted RBP2.32□□□□□ -2.04
CSTF1-207ENST00000498689 IGKV2D-26A0A0A0MRZ7 120 aa2.32□□□□□ -2.04
CSTF1-207ENST00000498689 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.32□□□□□ -2.04
CSTF1-207ENST00000498689 H3BQ15 152 aa2.32□□□□□ -2.04
CSTF1-207ENST00000498689 EDF1O60869 148 aaKnown RBP2.32□□□□□ -2.04
CSTF1-207ENST00000498689 PTTG1O95997 202 aa2.32□□□□□ -2.04
CSTF1-207ENST00000498689 IGKV2D-40P01614 121 aaPredicted RBP2.32□□□□□ -2.04
CSTF1-207ENST00000498689 GADD45AP24522 165 aa2.32□□□□□ -2.04
CSTF1-207ENST00000498689 MT3P25713 68 aa2.32□□□□□ -2.04
CSTF1-207ENST00000498689 KRTAP10-5P60370 271 aa2.32□□□□□ -2.04
CSTF1-207ENST00000498689 TRIM16LQ309B1 348 aa2.32□□□□□ -2.04
CSTF1-207ENST00000498689 CDNFQ49AH0 187 aa2.32□□□□□ -2.04
CSTF1-207ENST00000498689 NMSQ5H8A3 153 aa2.32□□□□□ -2.04
CSTF1-207ENST00000498689 CFAP161Q6P656 301 aa2.32□□□□□ -2.04
CSTF1-207ENST00000498689 C20orf203Q8NBC4 194 aa2.32□□□□□ -2.04
CSTF1-207ENST00000498689 CIB1Q99828 191 aa2.32□□□□□ -2.04
CSTF1-207ENST00000498689 PDCD10Q9BUL8 212 aa2.32□□□□□ -2.04
CSTF1-207ENST00000498689 FXYD6Q9H0Q3 95 aa2.32□□□□□ -2.04
CSTF1-207ENST00000498689 PARLQ9H300 379 aa2.32□□□□□ -2.04
CSTF1-207ENST00000498689 AK6Q9Y3D8 172 aaKnown RBP2.32□□□□□ -2.04
CSTF1-207ENST00000498689 IGLV4-60A0A075B6I1 120 aa2.31□□□□□ -2.04
CSTF1-207ENST00000498689 TRAV8-4A0A0B4J246 113 aa2.31□□□□□ -2.04
CSTF1-207ENST00000498689 P01737 135 aa2.31□□□□□ -2.04
CSTF1-207ENST00000498689 GZMBP10144 247 aa2.31□□□□□ -2.04
CSTF1-207ENST00000498689 FGF6P10767 208 aa2.31□□□□□ -2.04
CSTF1-207ENST00000498689 CXCL2P19875 107 aa2.31□□□□□ -2.04
CSTF1-207ENST00000498689 ANXA7P20073 488 aaKnown RBP2.31□□□□□ -2.04
CSTF1-207ENST00000498689 FGF8P55075 233 aaPredicted RBP2.31□□□□□ -2.04
CSTF1-207ENST00000498689 UBE2D3P61077 147 aa2.31□□□□□ -2.04
CSTF1-207ENST00000498689 UBE2D2P62837 147 aa2.31□□□□□ -2.04
CSTF1-207ENST00000498689 RPS25P62851 125 aaKnown RBP2.31□□□□□ -2.04
CSTF1-207ENST00000498689 UBE2BP63146 152 aa2.31□□□□□ -2.04
CSTF1-207ENST00000498689 MEF2BQ02080 365 aaPredicted RBP2.31□□□□□ -2.04
CSTF1-207ENST00000498689 ZFP69Q49AA0 526 aa2.31□□□□□ -2.04
CSTF1-207ENST00000498689 FAM229BQ4G0N7 80 aa2.31□□□□□ -2.04
CSTF1-207ENST00000498689 UFSP1Q6NVU6 142 aa2.31□□□□□ -2.04
CSTF1-207ENST00000498689 FAM159AQ6UWV7 190 aa2.31□□□□□ -2.04
CSTF1-207ENST00000498689 PATE2Q6UY27 113 aa2.31□□□□□ -2.04
CSTF1-207ENST00000498689 NTM-AS1Q6ZSK4 140 aa2.31□□□□□ -2.04
CSTF1-207ENST00000498689 ZNF485Q8NCK3 441 aa2.31□□□□□ -2.04
CSTF1-207ENST00000498689 CANT1Q8WVQ1 401 aa2.31□□□□□ -2.04
CSTF1-207ENST00000498689 AUNIPQ9H7T9 357 aa2.31□□□□□ -2.04
CSTF1-207ENST00000498689 TMBIM4Q9HC24 238 aa2.31□□□□□ -2.04
CSTF1-207ENST00000498689 NPVFQ9HCQ7 196 aa2.31□□□□□ -2.04
CSTF1-207ENST00000498689 RAB22AQ9UL26 194 aa2.31□□□□□ -2.04
CSTF1-207ENST00000498689 HIGD1AQ9Y241 93 aa2.31□□□□□ -2.04
CSTF1-207ENST00000498689 IFITM10A6NMD0 228 aa2.3□□□□□ -2.04
CSTF1-207ENST00000498689 GABARAPH6UMI1 98 aa2.3□□□□□ -2.04
CSTF1-207ENST00000498689 CIDEAO60543 219 aa2.3□□□□□ -2.04
CSTF1-207ENST00000498689 GABARAPO95166 117 aa2.3□□□□□ -2.04
CSTF1-207ENST00000498689 FABP1P07148 127 aa2.3□□□□□ -2.04
CSTF1-207ENST00000498689 MALP21145 153 aa2.3□□□□□ -2.04
CSTF1-207ENST00000498689 MT4P47944 62 aa2.3□□□□□ -2.04
CSTF1-207ENST00000498689 SPCS3P61009 180 aa2.3□□□□□ -2.04
CSTF1-207ENST00000498689 HERV-K104P61576 105 aa2.3□□□□□ -2.04
CSTF1-207ENST00000498689 SYCNQ0VAF6 134 aa2.3□□□□□ -2.04
CSTF1-207ENST00000498689 GGNBP1Q5YKI7 109 aa2.3□□□□□ -2.04
CSTF1-207ENST00000498689 CCDC197Q8NCU1 140 aa2.3□□□□□ -2.04
CSTF1-207ENST00000498689 BEST4Q8NFU0 473 aa2.3□□□□□ -2.04
CSTF1-207ENST00000498689 RNASE11Q8TAA1 199 aaKnown RBP2.3□□□□□ -2.04
CSTF1-207ENST00000498689 RAB2BQ8WUD1 216 aa2.3□□□□□ -2.04
CSTF1-207ENST00000498689 AAMDCQ9H7C9 122 aa2.3□□□□□ -2.04
CSTF1-207ENST00000498689 NDUFB4O95168 129 aa2.29□□□□□ -2.04
CSTF1-207ENST00000498689 NMBP08949 121 aa2.29□□□□□ -2.04
CSTF1-207ENST00000498689 OR5G3P0C626 314 aa2.29□□□□□ -2.04
CSTF1-207ENST00000498689 IGLC2P0DOY2 106 aa2.29□□□□□ -2.04
CSTF1-207ENST00000498689 AKR1C2P52895 323 aa2.29□□□□□ -2.04
CSTF1-207ENST00000498689 PIK3CD-AS1Q5SR53 167 aa2.29□□□□□ -2.04
CSTF1-207ENST00000498689 Q6AWC8 147 aa2.29□□□□□ -2.04
CSTF1-207ENST00000498689 LAIR2Q6ISS4 152 aa2.29□□□□□ -2.04
CSTF1-207ENST00000498689 LPCAT3Q6P1A2 487 aa2.29□□□□□ -2.04
CSTF1-207ENST00000498689 LHFPL1Q86WI0 220 aa2.29□□□□□ -2.04
CSTF1-207ENST00000498689 Q8N377 158 aa2.29□□□□□ -2.04
CSTF1-207ENST00000498689 ZFAND1Q8TCF1 268 aa2.29□□□□□ -2.04
CSTF1-207ENST00000498689 DTD1Q8TEA8 209 aa2.29□□□□□ -2.04
CSTF1-207ENST00000498689 PHYHIPQ92561 330 aa2.29□□□□□ -2.04
CSTF1-207ENST00000498689 TVP23CQ96ET8 276 aa2.29□□□□□ -2.04
CSTF1-207ENST00000498689 MYCBPQ99417 103 aaPredicted RBP2.29□□□□□ -2.04
CSTF1-207ENST00000498689 SIKE1Q9BRV8 207 aa2.29□□□□□ -2.04
CSTF1-207ENST00000498689 GABARAPL3Q9BY60 117 aa2.29□□□□□ -2.04
CSTF1-207ENST00000498689 CTDSP1Q9GZU7 261 aa2.29□□□□□ -2.04
CSTF1-207ENST00000498689 ZNF492Q9P255 531 aa2.29□□□□□ -2.04
CSTF1-207ENST00000498689 HSPB7Q9UBY9 170 aa2.29□□□□□ -2.04
CSTF1-207ENST00000498689 PKIGQ9Y2B9 76 aa2.29□□□□□ -2.04
CSTF1-207ENST00000498689 PHLDA3Q9Y5J5 127 aa2.29□□□□□ -2.04
CSTF1-207ENST00000498689 PXMP4Q9Y6I8 212 aa2.29□□□□□ -2.04
CSTF1-207ENST00000498689 IGKV3OR2-268A0A0C4DH90 116 aa2.28□□□□□ -2.04
CSTF1-207ENST00000498689 CEBPZOSA8MTT3 80 aa2.28□□□□□ -2.04
CSTF1-207ENST00000498689 M0QXV9 152 aa2.28□□□□□ -2.04
CSTF1-207ENST00000498689 PTMSP20962 102 aa2.28□□□□□ -2.04
CSTF1-207ENST00000498689 GPX4P36969 197 aaPredicted RBP2.28□□□□□ -2.04
CSTF1-207ENST00000498689 CAV2P51636 162 aa2.28□□□□□ -2.04
CSTF1-207ENST00000498689 ZNF266Q14584 549 aa2.28□□□□□ -2.04
CSTF1-207ENST00000498689 AARDQ4LEZ3 155 aa2.28□□□□□ -2.04
CSTF1-207ENST00000498689 SPAG11AQ6PDA7 123 aa2.28□□□□□ -2.04
CSTF1-207ENST00000498689 TMPRSS11AQ6ZMR5 421 aa2.28□□□□□ -2.04
CSTF1-207ENST00000498689 HYPMO75409 117 aa2.27□□□□□ -2.05
CSTF1-207ENST00000498689 CFDP00746 253 aaPredicted RBP2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms