RNA–Protein interactions for RNA: ENST00000498212.1

HMGXB4-207, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-207ENST00000498212 TDRG1Q3Y452 100 aa5.84□□□□□ -1.47
HMGXB4-207ENST00000498212 ZNF575Q86XF7 245 aa5.84□□□□□ -1.47
HMGXB4-207ENST00000498212 C5orf17Q8NAS9 161 aa5.84□□□□□ -1.47
HMGXB4-207ENST00000498212 INO80EQ8NBZ0 244 aaPredicted RBP5.84□□□□□ -1.47
HMGXB4-207ENST00000498212 SUN5Q8TC36 379 aa5.84□□□□□ -1.47
HMGXB4-207ENST00000498212 RASL10AQ92737 203 aa5.84□□□□□ -1.47
HMGXB4-207ENST00000498212 TVP23CQ96ET8 276 aa5.84□□□□□ -1.47
HMGXB4-207ENST00000498212 C8orf49Q96NF6 230 aa5.84□□□□□ -1.47
HMGXB4-207ENST00000498212 NDFIP1Q9BT67 221 aa5.84□□□□□ -1.47
HMGXB4-207ENST00000498212 KRTAP1-5Q9BYS1 174 aa5.84□□□□□ -1.47
HMGXB4-207ENST00000498212 ACTR3CQ9C0K3 210 aaPredicted RBP5.84□□□□□ -1.47
HMGXB4-207ENST00000498212 SH3BGRL3Q9H299 93 aa5.84□□□□□ -1.47
HMGXB4-207ENST00000498212 TNFSF18Q9UNG2 199 aa5.84□□□□□ -1.47
HMGXB4-207ENST00000498212 KIAA1109Q2LD37 5005 aa5.84□□□□□ -1.48
HMGXB4-207ENST00000498212 BORCS7-ASMTA0A0B4J1R7 106 aa5.83□□□□□ -1.48
HMGXB4-207ENST00000498212 RNF222A6NCQ9 220 aa5.83□□□□□ -1.48
HMGXB4-207ENST00000498212 M0R2P5 195 aa5.83□□□□□ -1.48
HMGXB4-207ENST00000498212 GNRH2O43555 120 aa5.83□□□□□ -1.48
HMGXB4-207ENST00000498212 TCRAP04437 139 aa5.83□□□□□ -1.48
HMGXB4-207ENST00000498212 TYMSP04818 313 aa5.83□□□□□ -1.48
HMGXB4-207ENST00000498212 MRPL23Q16540 153 aaKnown RBP5.83□□□□□ -1.48
HMGXB4-207ENST00000498212 RPL7L1Q6DKI1 246 aaKnown RBP5.83□□□□□ -1.48
HMGXB4-207ENST00000498212 IQCF2Q8IXL9 164 aa5.83□□□□□ -1.48
HMGXB4-207ENST00000498212 ZNF479Q96JC4 524 aa5.83□□□□□ -1.48
HMGXB4-207ENST00000498212 KCNS1Q96KK3 526 aa5.83□□□□□ -1.48
HMGXB4-207ENST00000498212 SGK494Q96LW2 274 aa5.83□□□□□ -1.48
HMGXB4-207ENST00000498212 SDF2L1Q9HCN8 221 aa5.83□□□□□ -1.48
HMGXB4-207ENST00000498212 TMEM167BQ9NRX6 74 aa5.83□□□□□ -1.48
HMGXB4-207ENST00000498212 HERC2O95714 4834 aa5.82□□□□□ -1.48
HMGXB4-207ENST00000498212 TRAV4A0A0B4J268 109 aa5.82□□□□□ -1.48
HMGXB4-207ENST00000498212 IGHV3-16A0A0C4DH30 117 aa5.82□□□□□ -1.48
HMGXB4-207ENST00000498212 SCO2A0A1W2PP80 73 aa5.82□□□□□ -1.48
HMGXB4-207ENST00000498212 GGTLC3B5MD39 225 aa5.82□□□□□ -1.48
HMGXB4-207ENST00000498212 SIVA1O15304 175 aa5.82□□□□□ -1.48
HMGXB4-207ENST00000498212 BTF3P20290 206 aaKnown RBP5.82□□□□□ -1.48
HMGXB4-207ENST00000498212 SUMO1P63165 101 aaKnown RBP5.82□□□□□ -1.48
HMGXB4-207ENST00000498212 RGS21Q2M5E4 152 aa5.82□□□□□ -1.48
HMGXB4-207ENST00000498212 ZFP69Q49AA0 526 aa5.82□□□□□ -1.48
HMGXB4-207ENST00000498212 NEGR1Q7Z3B1 354 aa5.82□□□□□ -1.48
HMGXB4-207ENST00000498212 OR4C5Q8NGB2 326 aa5.82□□□□□ -1.48
HMGXB4-207ENST00000498212 OR2T35Q8NGX2 323 aa5.82□□□□□ -1.48
HMGXB4-207ENST00000498212 PSG8Q9UQ74 426 aa5.82□□□□□ -1.48
HMGXB4-207ENST00000498212 PKD1P98161 4303 aa5.82□□□□□ -1.48
HMGXB4-207ENST00000498212 C16orf90A8MZG2 172 aa5.81□□□□□ -1.48
HMGXB4-207ENST00000498212 K7EQD1 137 aa5.81□□□□□ -1.48
HMGXB4-207ENST00000498212 NXPH4O95158 308 aa5.81□□□□□ -1.48
HMGXB4-207ENST00000498212 GCGP01275 180 aa5.81□□□□□ -1.48
HMGXB4-207ENST00000498212 ORM1P02763 201 aa5.81□□□□□ -1.48
HMGXB4-207ENST00000498212 SRIP30626 198 aa5.81□□□□□ -1.48
HMGXB4-207ENST00000498212 FLI1Q01543 452 aaPredicted RBP5.81□□□□□ -1.48
HMGXB4-207ENST00000498212 LYPD5Q6UWN5 251 aa5.81□□□□□ -1.48
HMGXB4-207ENST00000498212 PRNTQ86SH4 94 aa5.81□□□□□ -1.48
HMGXB4-207ENST00000498212 CYB561D1Q8N8Q1 229 aa5.81□□□□□ -1.48
HMGXB4-207ENST00000498212 TMEM75Q8N9X5 138 aa5.81□□□□□ -1.48
HMGXB4-207ENST00000498212 PCNPQ8WW12 178 aaKnown RBP5.81□□□□□ -1.48
HMGXB4-207ENST00000498212 KRTAP9-9Q9BYP9 154 aa5.81□□□□□ -1.48
HMGXB4-207ENST00000498212 KRTAP9-4Q9BYQ2 154 aa5.81□□□□□ -1.48
HMGXB4-207ENST00000498212 EPDR1Q9UM22 224 aa5.81□□□□□ -1.48
HMGXB4-207ENST00000498212 CTXND1A0A1B0GTU2 59 aa5.8□□□□□ -1.48
HMGXB4-207ENST00000498212 A0A1W2PRE2 83 aa5.8□□□□□ -1.48
HMGXB4-207ENST00000498212 FBLL1A6NHQ2 334 aaKnown RBP5.8□□□□□ -1.48
HMGXB4-207ENST00000498212 A6NJY4 79 aa5.8□□□□□ -1.48
HMGXB4-207ENST00000498212 C9JCJ5 164 aa5.8□□□□□ -1.48
HMGXB4-207ENST00000498212 TAAR5O14804 337 aa5.8□□□□□ -1.48
HMGXB4-207ENST00000498212 IGLV2-11P01706 119 aa5.8□□□□□ -1.48
HMGXB4-207ENST00000498212 PFN1P07737 140 aaKnown RBP5.8□□□□□ -1.48
HMGXB4-207ENST00000498212 GYPEP15421 78 aa5.8□□□□□ -1.48
HMGXB4-207ENST00000498212 ZNF80P51504 273 aaPredicted RBP5.8□□□□□ -1.48
HMGXB4-207ENST00000498212 LINC00315P59091 139 aa5.8□□□□□ -1.48
HMGXB4-207ENST00000498212 ZNF726P1Q15940 193 aa5.8□□□□□ -1.48
HMGXB4-207ENST00000498212 SMUG1Q53HV7 270 aa5.8□□□□□ -1.48
HMGXB4-207ENST00000498212 AKR1C8PQ5T2L2 129 aa5.8□□□□□ -1.48
HMGXB4-207ENST00000498212 KRTAP17-1Q9BYP8 105 aa5.8□□□□□ -1.48
HMGXB4-207ENST00000498212 PKHD1P08F94 4074 aa5.79□□□□□ -1.48
HMGXB4-207ENST00000498212 G3V3Q6 166 aa5.79□□□□□ -1.48
HMGXB4-207ENST00000498212 ARPC5O15511 151 aa5.79□□□□□ -1.48
HMGXB4-207ENST00000498212 IFNA7P01567 189 aa5.79□□□□□ -1.48
HMGXB4-207ENST00000498212 FGF8P55075 233 aaPredicted RBP5.79□□□□□ -1.48
HMGXB4-207ENST00000498212 UBE2G2P60604 165 aa5.79□□□□□ -1.48
HMGXB4-207ENST00000498212 ZNF876PQ49A33 203 aa5.79□□□□□ -1.48
HMGXB4-207ENST00000498212 SAPCD1Q5SSQ6 148 aa5.79□□□□□ -1.48
HMGXB4-207ENST00000498212 SPATA12Q7Z6I5 190 aa5.79□□□□□ -1.48
HMGXB4-207ENST00000498212 TXNDC17Q9BRA2 123 aa5.79□□□□□ -1.48
HMGXB4-207ENST00000498212 C11orf21Q9P2W6 132 aa5.79□□□□□ -1.48
HMGXB4-207ENST00000498212 LY96Q9Y6Y9 160 aa5.79□□□□□ -1.48
HMGXB4-207ENST00000498212 TRAV9-2A0A087WT02 112 aa5.78□□□□□ -1.48
HMGXB4-207ENST00000498212 TRAV34A0A0B4J273 112 aa5.78□□□□□ -1.48
HMGXB4-207ENST00000498212 LOC100131303A0A0U1RQF7 123 aa5.78□□□□□ -1.48
HMGXB4-207ENST00000498212 PEX7O00628 323 aa5.78□□□□□ -1.48
HMGXB4-207ENST00000498212 CIDEAO60543 219 aa5.78□□□□□ -1.48
HMGXB4-207ENST00000498212 GATA1P15976 413 aaPredicted RBP5.78□□□□□ -1.48
HMGXB4-207ENST00000498212 PPT1P50897 306 aa5.78□□□□□ -1.48
HMGXB4-207ENST00000498212 SH2D6Q7Z4S9 175 aa5.78□□□□□ -1.48
HMGXB4-207ENST00000498212 WFDC10BQ8IUB3 73 aa5.78□□□□□ -1.48
HMGXB4-207ENST00000498212 KRTAP19-1Q8IUB9 90 aa5.78□□□□□ -1.48
HMGXB4-207ENST00000498212 LINC00479Q96M42 142 aa5.78□□□□□ -1.48
HMGXB4-207ENST00000498212 C9orf85Q96MD7 179 aa5.78□□□□□ -1.48
HMGXB4-207ENST00000498212 NKX6-2Q9C056 277 aaPredicted RBP5.78□□□□□ -1.48
HMGXB4-207ENST00000498212 ARL2-SNX15V9GYD0 113 aa5.78□□□□□ -1.48
HMGXB4-207ENST00000498212 MAP1LC3B2A6NCE7 125 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms