RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 CBY3A6NI87 242 aa10.83□□□□□ -0.68
NUP50-219ENST00000497960 F5H768 121 aa10.83□□□□□ -0.68
NUP50-219ENST00000497960 RGS13O14921 159 aa10.83□□□□□ -0.68
NUP50-219ENST00000497960 ATP5G1P05496 136 aa10.83□□□□□ -0.68
NUP50-219ENST00000497960 RPL35P42766 123 aaKnown RBP10.83□□□□□ -0.68
NUP50-219ENST00000497960 IFITM2Q01629 132 aa10.83□□□□□ -0.68
NUP50-219ENST00000497960 Q6AWC8 147 aa10.83□□□□□ -0.68
NUP50-219ENST00000497960 C15orf53Q8NAA6 179 aa10.83□□□□□ -0.68
NUP50-219ENST00000497960 DERL1Q9BUN8 251 aa10.83□□□□□ -0.68
NUP50-219ENST00000497960 MED9Q9NWA0 146 aa10.83□□□□□ -0.68
NUP50-219ENST00000497960 KLF12Q9Y4X4 402 aa10.83□□□□□ -0.68
NUP50-219ENST00000497960 EPPK1P58107 5090 aaKnown RBP10.83□□□□□ -0.68
NUP50-219ENST00000497960 KMT2AQ03164 3969 aa10.82□□□□□ -0.68
NUP50-219ENST00000497960 TRAV21A0A0B4J279 112 aa10.82□□□□□ -0.68
NUP50-219ENST00000497960 TRBV6-1A0A0K0K1D8 114 aa10.82□□□□□ -0.68
NUP50-219ENST00000497960 SNURFLB1AK76 121 aa10.82□□□□□ -0.68
NUP50-219ENST00000497960 GCGP01275 180 aa10.82□□□□□ -0.68
NUP50-219ENST00000497960 LTAP01374 205 aa10.82□□□□□ -0.68
NUP50-219ENST00000497960 CEBPGP53567 150 aa10.82□□□□□ -0.68
NUP50-219ENST00000497960 NAGKQ9UJ70 344 aa10.82□□□□□ -0.68
NUP50-219ENST00000497960 ZFP30Q9Y2G7 519 aa10.82□□□□□ -0.68
NUP50-219ENST00000497960 NHLRC2Q8NBF2 726 aa10.81□□□□□ -0.68
NUP50-219ENST00000497960 IGHV1OR15-1A0A075B7D0 117 aa10.8□□□□□ -0.68
NUP50-219ENST00000497960 TMEM250H0YL14 139 aa10.8□□□□□ -0.68
NUP50-219ENST00000497960 ZNF324O75467 553 aaPredicted RBP10.8□□□□□ -0.68
NUP50-219ENST00000497960 PFN1P07737 140 aaKnown RBP10.8□□□□□ -0.68
NUP50-219ENST00000497960 ZNF674Q2M3X9 581 aa10.8□□□□□ -0.68
NUP50-219ENST00000497960 CENPWQ5EE01 88 aa10.8□□□□□ -0.68
NUP50-219ENST00000497960 MUC21Q5SSG8 566 aa10.8□□□□□ -0.68
NUP50-219ENST00000497960 Q6ZQT7 251 aa10.8□□□□□ -0.68
NUP50-219ENST00000497960 BAGE2Q86Y30 109 aa10.8□□□□□ -0.68
NUP50-219ENST00000497960 EIF4E3Q8N5X7 224 aaKnown RBP10.8□□□□□ -0.68
NUP50-219ENST00000497960 ZC2HC1AQ96GY0 325 aa10.8□□□□□ -0.68
NUP50-219ENST00000497960 BIRC6Q9NR09 4857 aa10.8□□□□□ -0.68
NUP50-219ENST00000497960 VPS13DQ5THJ4 4388 aa10.79□□□□□ -0.68
NUP50-219ENST00000497960 GNG4P50150 75 aa10.79□□□□□ -0.68
NUP50-219ENST00000497960 ZNF80P51504 273 aaPredicted RBP10.79□□□□□ -0.68
NUP50-219ENST00000497960 RNF212Q495C1 297 aa10.79□□□□□ -0.68
NUP50-219ENST00000497960 CLLU1Q5K131 121 aa10.79□□□□□ -0.68
NUP50-219ENST00000497960 FAM159AQ6UWV7 190 aa10.79□□□□□ -0.68
NUP50-219ENST00000497960 TMEM183AQ8IXX5 376 aa10.79□□□□□ -0.68
NUP50-219ENST00000497960 PARLQ9H300 379 aa10.79□□□□□ -0.68
NUP50-219ENST00000497960 LINC00467Q9BRT7 94 aa10.78□□□□□ -0.68
NUP50-219ENST00000497960 TRGV11A0A075B6L2 103 aa10.77□□□□□ -0.69
NUP50-219ENST00000497960 GAGE12BA1L429 117 aa10.77□□□□□ -0.69
NUP50-219ENST00000497960 RAB19A4D1S5 217 aa10.77□□□□□ -0.69
NUP50-219ENST00000497960 NDUFS6O75380 124 aaKnown RBP10.77□□□□□ -0.69
NUP50-219ENST00000497960 GAGE7O76087 117 aa10.77□□□□□ -0.69
NUP50-219ENST00000497960 NUDT3O95989 172 aa10.77□□□□□ -0.69
NUP50-219ENST00000497960 GAGE12FP0CL80 117 aa10.77□□□□□ -0.69
NUP50-219ENST00000497960 GAGE12GP0CL81 117 aa10.77□□□□□ -0.69
NUP50-219ENST00000497960 GAGE12IP0CL82 117 aa10.77□□□□□ -0.69
NUP50-219ENST00000497960 MGST1P10620 155 aaKnown RBP10.77□□□□□ -0.69
NUP50-219ENST00000497960 DAZ2Q13117 558 aaKnown RBP10.77□□□□□ -0.69
NUP50-219ENST00000497960 PEA15Q15121 130 aa10.77□□□□□ -0.69
NUP50-219ENST00000497960 ANXA2RQ3ZCQ2 193 aa10.77□□□□□ -0.69
NUP50-219ENST00000497960 FAM162BQ5T6X4 162 aa10.77□□□□□ -0.69
NUP50-219ENST00000497960 PRR27Q6MZM9 219 aa10.77□□□□□ -0.69
NUP50-219ENST00000497960 LINC00612Q8N6U2 182 aa10.77□□□□□ -0.69
NUP50-219ENST00000497960 SDF2L1Q9HCN8 221 aa10.77□□□□□ -0.69
NUP50-219ENST00000497960 M0R2N4 97 aa10.76□□□□□ -0.69
NUP50-219ENST00000497960 SH2D1AO60880 128 aa10.76□□□□□ -0.69
NUP50-219ENST00000497960 SRP19P09132 144 aaKnown RBP10.76□□□□□ -0.69
NUP50-219ENST00000497960 ZNF415Q09FC8 603 aa10.76□□□□□ -0.69
NUP50-219ENST00000497960 OR5I1Q13606 314 aa10.76□□□□□ -0.69
NUP50-219ENST00000497960 COX8CQ7Z4L0 72 aa10.76□□□□□ -0.69
NUP50-219ENST00000497960 KCNS1Q96KK3 526 aa10.76□□□□□ -0.69
NUP50-219ENST00000497960 GSN-AS1Q9NRJ2 163 aa10.76□□□□□ -0.69
NUP50-219ENST00000497960 FABP5P3A8MUU1 101 aa10.75□□□□□ -0.69
NUP50-219ENST00000497960 FAM3BP58499 235 aaPredicted RBP10.75□□□□□ -0.69
NUP50-219ENST00000497960 LGALS9BQ3B8N2 356 aa10.75□□□□□ -0.69
NUP50-219ENST00000497960 SMIM12Q96EX1 92 aa10.75□□□□□ -0.69
NUP50-219ENST00000497960 SMIM7Q9BQ49 75 aa10.75□□□□□ -0.69
NUP50-219ENST00000497960 TP53TG3Q9ULZ0 132 aa10.75□□□□□ -0.69
NUP50-219ENST00000497960 TRBV20OR9-2A0A075B6H5 130 aa10.74□□□□□ -0.69
NUP50-219ENST00000497960 IGLV2-18A0A075B6J9 118 aa10.74□□□□□ -0.69
NUP50-219ENST00000497960 TRGV2A0A075B6R0 118 aa10.74□□□□□ -0.69
NUP50-219ENST00000497960 PGPEP1LA6NFU8 196 aa10.74□□□□□ -0.69
NUP50-219ENST00000497960 C9JCJ5 164 aa10.74□□□□□ -0.69
NUP50-219ENST00000497960 TYMSP04818 313 aa10.74□□□□□ -0.69
NUP50-219ENST00000497960 SRSF3P84103 164 aaKnown RBP10.74□□□□□ -0.69
NUP50-219ENST00000497960 IBA57Q5T440 356 aaKnown RBP10.74□□□□□ -0.69
NUP50-219ENST00000497960 Q6ZTI0 123 aa10.74□□□□□ -0.69
NUP50-219ENST00000497960 LINC00336Q6ZUF6 198 aa10.74□□□□□ -0.69
NUP50-219ENST00000497960 C11orf72Q8NBR9 251 aa10.74□□□□□ -0.69
NUP50-219ENST00000497960 MLST8Q9BVC4 326 aa10.74□□□□□ -0.69
NUP50-219ENST00000497960 C11orf21Q9P2W6 132 aa10.74□□□□□ -0.69
NUP50-219ENST00000497960 TRGV1A0A0A0MS02 117 aa10.73□□□□□ -0.69
NUP50-219ENST00000497960 B4DEV8 164 aa10.73□□□□□ -0.69
NUP50-219ENST00000497960 M0R036 132 aa10.73□□□□□ -0.69
NUP50-219ENST00000497960 ORM1P02763 201 aa10.73□□□□□ -0.69
NUP50-219ENST00000497960 CCL18P55774 89 aa10.73□□□□□ -0.69
NUP50-219ENST00000497960 TCL1AP56279 114 aa10.73□□□□□ -0.69
NUP50-219ENST00000497960 TDRG1Q3Y452 100 aa10.73□□□□□ -0.69
NUP50-219ENST00000497960 SMDT1Q9H4I9 107 aa10.73□□□□□ -0.69
NUP50-219ENST00000497960 BIN3Q9NQY0 253 aa10.73□□□□□ -0.69
NUP50-219ENST00000497960 TRAV26-1A0A087WT03 109 aa10.72□□□□□ -0.69
NUP50-219ENST00000497960 ZNF727A8MUV8 499 aa10.72□□□□□ -0.69
NUP50-219ENST00000497960 IGLV2-8P01709 118 aa10.72□□□□□ -0.69
NUP50-219ENST00000497960 CRIP1P50238 77 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms