RNA–Protein interactions for RNA: ENST00000497722.2

PSPC1-205, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-205ENST00000497722 ZNF56Q15929 161 aa0.27□□□□□ -2.37
PSPC1-205ENST00000497722 GLYATL3Q5SZD4 288 aa0.27□□□□□ -2.37
PSPC1-205ENST00000497722 TMEM35BQ8NCS4 154 aa0.27□□□□□ -2.37
PSPC1-205ENST00000497722 OR4S1Q8NGB4 309 aa0.27□□□□□ -2.37
PSPC1-205ENST00000497722 OTOSQ8NHW6 89 aa0.27□□□□□ -2.37
PSPC1-205ENST00000497722 SMIM7Q9BQ49 75 aa0.27□□□□□ -2.37
PSPC1-205ENST00000497722 ASH1LQ9NR48 2969 aaKnown RBP0.27□□□□□ -2.37
PSPC1-205ENST00000497722 MRPL36Q9P0J6 103 aaKnown RBP0.27□□□□□ -2.37
PSPC1-205ENST00000497722 HSPB11Q9Y547 144 aa0.27□□□□□ -2.37
PSPC1-205ENST00000497722 RREB1Q92766 1687 aa0.27□□□□□ -2.37
PSPC1-205ENST00000497722 CACNA1EQ15878 2313 aa0.26□□□□□ -2.37
PSPC1-205ENST00000497722 NAV2Q8IVL1 2488 aa0.26□□□□□ -2.37
PSPC1-205ENST00000497722 PNMA8CA0A1B0GUJ8 204 aa0.26□□□□□ -2.37
PSPC1-205ENST00000497722 TMEM30CPA0ZSE6 113 aa0.26□□□□□ -2.37
PSPC1-205ENST00000497722 DPM2O94777 84 aa0.26□□□□□ -2.37
PSPC1-205ENST00000497722 SLC25A5P05141 298 aaKnown RBP0.26□□□□□ -2.37
PSPC1-205ENST00000497722 FXYD3Q14802 87 aa0.26□□□□□ -2.37
PSPC1-205ENST00000497722 OR8B8Q15620 311 aa0.26□□□□□ -2.37
PSPC1-205ENST00000497722 C5orf56Q8N8D9 126 aa0.26□□□□□ -2.37
PSPC1-205ENST00000497722 DMAC1Q96GE9 116 aa0.26□□□□□ -2.37
PSPC1-205ENST00000497722 LINC00208Q96KT6 92 aa0.26□□□□□ -2.37
PSPC1-205ENST00000497722 METTL1Q9UBP6 276 aaKnown RBP0.26□□□□□ -2.37
PSPC1-205ENST00000497722 BLMP54132 1417 aaPredicted RBP0.26□□□□□ -2.37
PSPC1-205ENST00000497722 ZNF142P52746 1687 aaPredicted RBP0.26□□□□□ -2.37
PSPC1-205ENST00000497722 HELZP42694 1942 aaKnown RBP0.26□□□□□ -2.37
PSPC1-205ENST00000497722 NINQ8N4C6 2090 aa0.26□□□□□ -2.37
PSPC1-205ENST00000497722 TNCP24821 2201 aa0.26□□□□□ -2.37
PSPC1-205ENST00000497722 VIRMAQ69YN4 1812 aaKnown RBP0.25□□□□□ -2.37
PSPC1-205ENST00000497722 UHRF1BP1LA0JNW5 1464 aa0.25□□□□□ -2.37
PSPC1-205ENST00000497722 ZCCHC6Q5VYS8 1495 aaKnown RBP0.25□□□□□ -2.37
PSPC1-205ENST00000497722 ANKRD30AQ9BXX3 1397 aa0.25□□□□□ -2.37
PSPC1-205ENST00000497722 TMEM189A5PLL7 270 aa0.25□□□□□ -2.37
PSPC1-205ENST00000497722 HIGD1CA8MV81 97 aa0.25□□□□□ -2.37
PSPC1-205ENST00000497722 TPST1O60507 370 aa0.25□□□□□ -2.37
PSPC1-205ENST00000497722 TCRAP04437 139 aa0.25□□□□□ -2.37
PSPC1-205ENST00000497722 IL7P13232 177 aa0.25□□□□□ -2.37
PSPC1-205ENST00000497722 ADCYAP1P18509 176 aa0.25□□□□□ -2.37
PSPC1-205ENST00000497722 RPL37P61927 97 aaKnown RBP0.25□□□□□ -2.37
PSPC1-205ENST00000497722 RHOHQ15669 191 aa0.25□□□□□ -2.37
PSPC1-205ENST00000497722 IQCJQ1A5X6 159 aa0.25□□□□□ -2.37
PSPC1-205ENST00000497722 HSD17B12Q53GQ0 312 aa0.25□□□□□ -2.37
PSPC1-205ENST00000497722 LYPD5Q6UWN5 251 aa0.25□□□□□ -2.37
PSPC1-205ENST00000497722 OR8I2Q8N0Y5 310 aa0.25□□□□□ -2.37
PSPC1-205ENST00000497722 SPANXA1Q9NS26 97 aa0.25□□□□□ -2.37
PSPC1-205ENST00000497722 SPANXCQ9NY87 97 aa0.25□□□□□ -2.37
PSPC1-205ENST00000497722 CPDO75976 1380 aa0.24□□□□□ -2.37
PSPC1-205ENST00000497722 KNTC1P50748 2209 aa0.24□□□□□ -2.37
PSPC1-205ENST00000497722 IGHV1-24A0A0C4DH33 117 aa0.24□□□□□ -2.37
PSPC1-205ENST00000497722 A0A0G2JMM0 328 aa0.24□□□□□ -2.37
PSPC1-205ENST00000497722 CDC42EP2O14613 210 aa0.24□□□□□ -2.37
PSPC1-205ENST00000497722 DEGS1O15121 323 aa0.24□□□□□ -2.37
PSPC1-205ENST00000497722 KRTAP2-3P0C7H8 128 aa0.24□□□□□ -2.37
PSPC1-205ENST00000497722 SCGB1A1P11684 91 aa0.24□□□□□ -2.37
PSPC1-205ENST00000497722 SDC4P31431 198 aa0.24□□□□□ -2.37
PSPC1-205ENST00000497722 CKS2P33552 79 aa0.24□□□□□ -2.37
PSPC1-205ENST00000497722 PSPHP78330 225 aa0.24□□□□□ -2.37
PSPC1-205ENST00000497722 DR1Q01658 176 aa0.24□□□□□ -2.37
PSPC1-205ENST00000497722 MORN2Q502X0 79 aa0.24□□□□□ -2.37
PSPC1-205ENST00000497722 UNQ5815/PRO19632Q6UWF5 114 aa0.24□□□□□ -2.37
PSPC1-205ENST00000497722 TMEM91Q6ZNR0 172 aa0.24□□□□□ -2.37
PSPC1-205ENST00000497722 IDO2Q6ZQW0 420 aa0.24□□□□□ -2.37
PSPC1-205ENST00000497722 KRTAP2-4Q9BYR9 128 aa0.24□□□□□ -2.37
PSPC1-205ENST00000497722 KRTAP2-1Q9BYU5 128 aa0.24□□□□□ -2.37
PSPC1-205ENST00000497722 MRPL40Q9NQ50 206 aaKnown RBP0.24□□□□□ -2.37
PSPC1-205ENST00000497722 COMMD3Q9UBI1 195 aa0.24□□□□□ -2.37
PSPC1-205ENST00000497722 BORCS7-ASMTA0A0B4J1R7 106 aa0.23□□□□□ -2.37
PSPC1-205ENST00000497722 LOC101927531A0A1B0GV80 90 aa0.23□□□□□ -2.37
PSPC1-205ENST00000497722 A0A1B0GW64 132 aa0.23□□□□□ -2.37
PSPC1-205ENST00000497722 C9JAW5 83 aa0.23□□□□□ -2.37
PSPC1-205ENST00000497722 TNFSF15O95150 251 aa0.23□□□□□ -2.37
PSPC1-205ENST00000497722 HIST1H1BP16401 226 aaKnown RBP0.23□□□□□ -2.37
PSPC1-205ENST00000497722 PLGLB1Q02325 96 aa0.23□□□□□ -2.37
PSPC1-205ENST00000497722 HIGD1AQ9Y241 93 aa0.23□□□□□ -2.37
PSPC1-205ENST00000497722 DNAJC15Q9Y5T4 150 aa0.23□□□□□ -2.37
PSPC1-205ENST00000497722 CASZ1Q86V15 1759 aa0.23□□□□□ -2.37
PSPC1-205ENST00000497722 ESPL1Q14674 2120 aa0.23□□□□□ -2.37
PSPC1-205ENST00000497722 A0A096LNT2 108 aa0.22□□□□□ -2.37
PSPC1-205ENST00000497722 TRAV2A0A0B4J234 112 aa0.22□□□□□ -2.37
PSPC1-205ENST00000497722 TRBV10-1A0A0K0K1A3 114 aa0.22□□□□□ -2.37
PSPC1-205ENST00000497722 CXorf51AA0A1B0GTR3 108 aa0.22□□□□□ -2.37
PSPC1-205ENST00000497722 IGKCP01834 107 aa0.22□□□□□ -2.37
PSPC1-205ENST00000497722 MT-ND4LP03901 98 aa0.22□□□□□ -2.37
PSPC1-205ENST00000497722 PAEPP09466 180 aa0.22□□□□□ -2.37
PSPC1-205ENST00000497722 HLA-DRB4P13762 266 aa0.22□□□□□ -2.37
PSPC1-205ENST00000497722 PCBD1P61457 104 aa0.22□□□□□ -2.37
PSPC1-205ENST00000497722 KLKP1Q107X0 134 aa0.22□□□□□ -2.37
PSPC1-205ENST00000497722 CCDC153Q494R4 210 aa0.22□□□□□ -2.37
PSPC1-205ENST00000497722 AKAP14Q86UN6 197 aa0.22□□□□□ -2.37
PSPC1-205ENST00000497722 TCTE3Q8IZS6 198 aa0.22□□□□□ -2.37
PSPC1-205ENST00000497722 PPDPFLQ8WWR9 84 aa0.22□□□□□ -2.37
PSPC1-205ENST00000497722 MAGOHBQ96A72 148 aaKnown RBP0.22□□□□□ -2.37
PSPC1-205ENST00000497722 SLC35B3Q9H1N7 401 aa0.22□□□□□ -2.37
PSPC1-205ENST00000497722 ATG5Q9H1Y0 275 aa0.22□□□□□ -2.37
PSPC1-205ENST00000497722 HLA-DRB4X5D2U9 266 aa0.22□□□□□ -2.37
PSPC1-205ENST00000497722 TANC1Q9C0D5 1861 aa0.22□□□□□ -2.37
PSPC1-205ENST00000497722 PLXNA1Q9UIW2 1896 aa0.22□□□□□ -2.37
PSPC1-205ENST00000497722 KIF13AQ9H1H9 1805 aa0.22□□□□□ -2.37
PSPC1-205ENST00000497722 PTPRMP28827 1452 aa0.22□□□□□ -2.37
PSPC1-205ENST00000497722 CEP152O94986 1710 aa0.21□□□□□ -2.38
PSPC1-205ENST00000497722 CCDC171Q6TFL3 1326 aa0.21□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 640.7 ms