RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 CTAGE3PQ8IX95 158 aa3.66□□□□□ -1.82
BRCA1-224ENST00000497488 ZNF471Q9BX82 626 aaPredicted RBP3.66□□□□□ -1.82
BRCA1-224ENST00000497488 TNFSF18Q9UNG2 199 aa3.66□□□□□ -1.82
BRCA1-224ENST00000497488 PTPRQQ9UMZ3 2332 aa3.66□□□□□ -1.82
BRCA1-224ENST00000497488 CHD6Q8TD26 2715 aa3.65□□□□□ -1.82
BRCA1-224ENST00000497488 SNRNP200O75643 2136 aaKnown RBP3.65□□□□□ -1.82
BRCA1-224ENST00000497488 ZFYVE26Q68DK2 2539 aa3.65□□□□□ -1.83
BRCA1-224ENST00000497488 IGLC6P0CF74 106 aa3.65□□□□□ -1.83
BRCA1-224ENST00000497488 LINC00694P0DN24 101 aa3.65□□□□□ -1.83
BRCA1-224ENST00000497488 NFYAP23511 347 aaPredicted RBP3.65□□□□□ -1.83
BRCA1-224ENST00000497488 DCDP81605 110 aaKnown RBP3.65□□□□□ -1.83
BRCA1-224ENST00000497488 EIF5AL1Q6IS14 154 aaKnown RBP3.65□□□□□ -1.83
BRCA1-224ENST00000497488 HAGHLQ6PII5 290 aaPredicted RBP3.65□□□□□ -1.83
BRCA1-224ENST00000497488 OR8B2Q96RD0 313 aa3.65□□□□□ -1.83
BRCA1-224ENST00000497488 SCRT1Q9BWW7 348 aa3.65□□□□□ -1.83
BRCA1-224ENST00000497488 PRR34Q9NV39 138 aa3.65□□□□□ -1.83
BRCA1-224ENST00000497488 IGSF10Q6WRI0 2623 aa3.65□□□□□ -1.83
BRCA1-224ENST00000497488 KALRNO60229 2985 aa3.65□□□□□ -1.83
BRCA1-224ENST00000497488 AHCTF1Q8WYP5 2266 aa3.64□□□□□ -1.83
BRCA1-224ENST00000497488 TRAV7A0A075B6U4 112 aa3.64□□□□□ -1.83
BRCA1-224ENST00000497488 TRGV5A0A0B4J1U4 118 aa3.64□□□□□ -1.83
BRCA1-224ENST00000497488 TRBV27A0A0K0K1C4 114 aa3.64□□□□□ -1.83
BRCA1-224ENST00000497488 C11orf86A6NJI1 115 aa3.64□□□□□ -1.83
BRCA1-224ENST00000497488 FAM25AB3EWG3 89 aa3.64□□□□□ -1.83
BRCA1-224ENST00000497488 FAM25CB3EWG5 89 aa3.64□□□□□ -1.83
BRCA1-224ENST00000497488 FAM25GB3EWG6 89 aa3.64□□□□□ -1.83
BRCA1-224ENST00000497488 TP53I11O14683 189 aa3.64□□□□□ -1.83
BRCA1-224ENST00000497488 ZNF25P17030 456 aaPredicted RBP3.64□□□□□ -1.83
BRCA1-224ENST00000497488 RAB5CP51148 216 aa3.64□□□□□ -1.83
BRCA1-224ENST00000497488 KHDC3LQ587J8 217 aa3.64□□□□□ -1.83
BRCA1-224ENST00000497488 SPINT4Q6UDR6 99 aa3.64□□□□□ -1.83
BRCA1-224ENST00000497488 SOSTDC1Q6X4U4 206 aa3.64□□□□□ -1.83
BRCA1-224ENST00000497488 TMEM136Q6ZRR5 245 aa3.64□□□□□ -1.83
BRCA1-224ENST00000497488 FDCSPQ8NFU4 85 aa3.64□□□□□ -1.83
BRCA1-224ENST00000497488 TP53TG3Q9ULZ0 132 aa3.64□□□□□ -1.83
BRCA1-224ENST00000497488 TIMM9Q9Y5J7 89 aa3.64□□□□□ -1.83
BRCA1-224ENST00000497488 PCM1Q15154 2024 aa3.64□□□□□ -1.83
BRCA1-224ENST00000497488 ZNF407Q9C0G0 2248 aa3.64□□□□□ -1.83
BRCA1-224ENST00000497488 C7orf71A4D174 169 aa3.63□□□□□ -1.83
BRCA1-224ENST00000497488 GNRH2O43555 120 aa3.63□□□□□ -1.83
BRCA1-224ENST00000497488 GPX1P07203 203 aa3.63□□□□□ -1.83
BRCA1-224ENST00000497488 ZNF14P17017 642 aaPredicted RBP3.63□□□□□ -1.83
BRCA1-224ENST00000497488 RELAQ04206 551 aa3.63□□□□□ -1.83
BRCA1-224ENST00000497488 RPS27LQ71UM5 84 aaKnown RBP3.63□□□□□ -1.83
BRCA1-224ENST00000497488 OR5A2Q8NGI9 324 aa3.63□□□□□ -1.83
BRCA1-224ENST00000497488 ZNF714Q96N38 554 aa3.63□□□□□ -1.83
BRCA1-224ENST00000497488 MINOS1-NBL1R4GNA1 71 aa3.63□□□□□ -1.83
BRCA1-224ENST00000497488 CACNA1GO43497 2377 aa3.63□□□□□ -1.83
BRCA1-224ENST00000497488 DSPPQ9NZW4 1301 aa3.63□□□□□ -1.83
BRCA1-224ENST00000497488 SPTBP11277 2137 aa3.62□□□□□ -1.83
BRCA1-224ENST00000497488 A0A0D9SG52 128 aa3.62□□□□□ -1.83
BRCA1-224ENST00000497488 SHBGP04278 402 aa3.62□□□□□ -1.83
BRCA1-224ENST00000497488 COX6A1P12074 109 aa3.62□□□□□ -1.83
BRCA1-224ENST00000497488 COPZ1P61923 177 aa3.62□□□□□ -1.83
BRCA1-224ENST00000497488 DEFB134Q4QY38 66 aa3.62□□□□□ -1.83
BRCA1-224ENST00000497488 LYZL1Q6UWQ5 148 aa3.62□□□□□ -1.83
BRCA1-224ENST00000497488 DPPA3Q6W0C5 159 aa3.62□□□□□ -1.83
BRCA1-224ENST00000497488 Q8N9L7 120 aa3.62□□□□□ -1.83
BRCA1-224ENST00000497488 OR5D16Q8NGK9 328 aa3.62□□□□□ -1.83
BRCA1-224ENST00000497488 TSLPQ969D9 159 aa3.62□□□□□ -1.83
BRCA1-224ENST00000497488 TCEAL7Q9BRU2 100 aa3.62□□□□□ -1.83
BRCA1-224ENST00000497488 TAF9BQ9HBM6 251 aa3.62□□□□□ -1.83
BRCA1-224ENST00000497488 MARCOQ9UEW3 520 aaPredicted RBP3.62□□□□□ -1.83
BRCA1-224ENST00000497488 FAM208BQ5VWN6 2430 aa3.62□□□□□ -1.83
BRCA1-224ENST00000497488 TNRC6AQ8NDV7 1962 aaKnown RBP3.62□□□□□ -1.83
BRCA1-224ENST00000497488 ATRXP46100 2492 aa3.61□□□□□ -1.83
BRCA1-224ENST00000497488 NUP210LQ5VU65 1888 aa3.61□□□□□ -1.83
BRCA1-224ENST00000497488 RELNP78509 3460 aa3.61□□□□□ -1.83
BRCA1-224ENST00000497488 IGLV3-9A0A075B6K5 115 aa3.61□□□□□ -1.83
BRCA1-224ENST00000497488 C9orf170A2RU37 121 aa3.61□□□□□ -1.83
BRCA1-224ENST00000497488 H7C2G1 150 aa3.61□□□□□ -1.83
BRCA1-224ENST00000497488 J3QKU1 62 aa3.61□□□□□ -1.83
BRCA1-224ENST00000497488 IFNA4P05014 189 aa3.61□□□□□ -1.83
BRCA1-224ENST00000497488 DEFA4P12838 97 aa3.61□□□□□ -1.83
BRCA1-224ENST00000497488 FXYD2P54710 66 aa3.61□□□□□ -1.83
BRCA1-224ENST00000497488 AQP4P55087 323 aa3.61□□□□□ -1.83
BRCA1-224ENST00000497488 BTG2P78543 158 aa3.61□□□□□ -1.83
BRCA1-224ENST00000497488 IGFBP7Q16270 282 aa3.61□□□□□ -1.83
BRCA1-224ENST00000497488 Q6P435 159 aa3.61□□□□□ -1.83
BRCA1-224ENST00000497488 PATE2Q6UY27 113 aa3.61□□□□□ -1.83
BRCA1-224ENST00000497488 OR5H6Q8NGV6 325 aa3.61□□□□□ -1.83
BRCA1-224ENST00000497488 PSMF1Q92530 271 aa3.61□□□□□ -1.83
BRCA1-224ENST00000497488 DUSP21Q9H596 190 aa3.61□□□□□ -1.83
BRCA1-224ENST00000497488 GNG8Q9UK08 70 aa3.61□□□□□ -1.83
BRCA1-224ENST00000497488 CFAP46Q8IYW2 2715 aa3.61□□□□□ -1.83
BRCA1-224ENST00000497488 IGKV3D-11A0A0A0MRZ8 115 aa3.6□□□□□ -1.83
BRCA1-224ENST00000497488 TRAV40A0A0B4J280 105 aa3.6□□□□□ -1.83
BRCA1-224ENST00000497488 TRBV10-2A0A0K0K1G8 114 aa3.6□□□□□ -1.83
BRCA1-224ENST00000497488 ZNF727A8MUV8 499 aa3.6□□□□□ -1.83
BRCA1-224ENST00000497488 RPL36A-HNRNPH2H7BZ11 118 aa3.6□□□□□ -1.83
BRCA1-224ENST00000497488 NPFFO15130 113 aa3.6□□□□□ -1.83
BRCA1-224ENST00000497488 RER1O15258 196 aa3.6□□□□□ -1.83
BRCA1-224ENST00000497488 PLXNB1O43157 2135 aa3.6□□□□□ -1.83
BRCA1-224ENST00000497488 NCR2O95944 276 aa3.6□□□□□ -1.83
BRCA1-224ENST00000497488 CRYGSP22914 178 aa3.6□□□□□ -1.83
BRCA1-224ENST00000497488 FUSP35637 526 aaKnown RBP eCLIP3.6□□□□□ -1.83
BRCA1-224ENST00000497488 FOXA3P55318 350 aaPredicted RBP3.6□□□□□ -1.83
BRCA1-224ENST00000497488 QRFPP83859 136 aa3.6□□□□□ -1.83
BRCA1-224ENST00000497488 EBI3Q14213 229 aa3.6□□□□□ -1.83
BRCA1-224ENST00000497488 HSD17B12Q53GQ0 312 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 119.7 ms