RNA–Protein interactions for RNA: ENST00000497440.5

SHROOM3-210, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 611 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-210ENST00000497440 MUC21Q5SSG8 566 aa7.52□□□□□ -1.21
SHROOM3-210ENST00000497440 FAM159AQ6UWV7 190 aa7.52□□□□□ -1.21
SHROOM3-210ENST00000497440 CYB561D1Q8N8Q1 229 aa7.52□□□□□ -1.21
SHROOM3-210ENST00000497440 MBD3L1Q8WWY6 194 aa7.52□□□□□ -1.21
SHROOM3-210ENST00000497440 ATG101Q9BSB4 218 aa7.52□□□□□ -1.21
SHROOM3-210ENST00000497440 NKX6-2Q9C056 277 aaPredicted RBP7.52□□□□□ -1.21
SHROOM3-210ENST00000497440 PRO0255Q9UI72 69 aa7.52□□□□□ -1.21
SHROOM3-210ENST00000497440 PSG8Q9UQ74 426 aa7.52□□□□□ -1.21
SHROOM3-210ENST00000497440 TRGV2A0A075B6R0 118 aa7.51□□□□□ -1.21
SHROOM3-210ENST00000497440 SMLR1H3BR10 107 aa7.51□□□□□ -1.21
SHROOM3-210ENST00000497440 M0R2N4 97 aa7.51□□□□□ -1.21
SHROOM3-210ENST00000497440 BTF3P20290 206 aaKnown RBP7.51□□□□□ -1.21
SHROOM3-210ENST00000497440 FHITP49789 147 aa7.51□□□□□ -1.21
SHROOM3-210ENST00000497440 FLI1Q01543 452 aaPredicted RBP7.51□□□□□ -1.21
SHROOM3-210ENST00000497440 UBE2DNLQ8IWF7 75 aa7.51□□□□□ -1.21
SHROOM3-210ENST00000497440 KCNS1Q96KK3 526 aa7.51□□□□□ -1.21
SHROOM3-210ENST00000497440 ARPC5LQ9BPX5 153 aa7.51□□□□□ -1.21
SHROOM3-210ENST00000497440 Q9H8V8 135 aa7.51□□□□□ -1.21
SHROOM3-210ENST00000497440 MRPS16Q9Y3D3 137 aaKnown RBP7.51□□□□□ -1.21
SHROOM3-210ENST00000497440 ARL2-SNX15V9GYD0 113 aa7.51□□□□□ -1.21
SHROOM3-210ENST00000497440 IGLV2-18A0A075B6J9 118 aa7.5□□□□□ -1.21
SHROOM3-210ENST00000497440 A0A0D9SG52 128 aa7.5□□□□□ -1.21
SHROOM3-210ENST00000497440 A0A0J9YY99 117 aa7.5□□□□□ -1.21
SHROOM3-210ENST00000497440 TRBV6-1A0A0K0K1D8 114 aa7.5□□□□□ -1.21
SHROOM3-210ENST00000497440 TYMSP04818 313 aa7.5□□□□□ -1.21
SHROOM3-210ENST00000497440 PFN1P07737 140 aaKnown RBP7.5□□□□□ -1.21
SHROOM3-210ENST00000497440 TMEM183BQ1AE95 376 aa7.5□□□□□ -1.21
SHROOM3-210ENST00000497440 SAPCD1Q5SSQ6 148 aa7.5□□□□□ -1.21
SHROOM3-210ENST00000497440 TMEM183AQ8IXX5 376 aa7.5□□□□□ -1.21
SHROOM3-210ENST00000497440 HIST1H2BAQ96A08 127 aa7.5□□□□□ -1.21
SHROOM3-210ENST00000497440 LINC00479Q96M42 142 aa7.5□□□□□ -1.21
SHROOM3-210ENST00000497440 KRTAP1-5Q9BYS1 174 aa7.5□□□□□ -1.21
SHROOM3-210ENST00000497440 MRPL16Q9NX20 251 aaKnown RBP7.5□□□□□ -1.21
SHROOM3-210ENST00000497440 HHLA3Q9XRX5 114 aa7.5□□□□□ -1.21
SHROOM3-210ENST00000497440 DNAH8Q96JB1 4490 aa7.5□□□□□ -1.21
SHROOM3-210ENST00000497440 PCLOQ9Y6V0 5065 aa7.49□□□□□ -1.21
SHROOM3-210ENST00000497440 A0A1W2PPQ1 181 aa7.49□□□□□ -1.21
SHROOM3-210ENST00000497440 PRSS29PA6NIE9 313 aa7.49□□□□□ -1.21
SHROOM3-210ENST00000497440 UMAD1C9J7I0 102 aa7.49□□□□□ -1.21
SHROOM3-210ENST00000497440 K7EQM0 130 aa7.49□□□□□ -1.21
SHROOM3-210ENST00000497440 M0R2P5 195 aa7.49□□□□□ -1.21
SHROOM3-210ENST00000497440 RNASE3P12724 160 aaKnown RBP7.49□□□□□ -1.21
SHROOM3-210ENST00000497440 CRIP1P50238 77 aa7.49□□□□□ -1.21
SHROOM3-210ENST00000497440 PIK3CD-AS1Q5SR53 167 aa7.49□□□□□ -1.21
SHROOM3-210ENST00000497440 DNLZQ5SXM8 178 aa7.49□□□□□ -1.21
SHROOM3-210ENST00000497440 AKR1C8PQ5T2L2 129 aa7.49□□□□□ -1.21
SHROOM3-210ENST00000497440 ZNF479Q96JC4 524 aa7.49□□□□□ -1.21
SHROOM3-210ENST00000497440 SGK494Q96LW2 274 aa7.49□□□□□ -1.21
SHROOM3-210ENST00000497440 C9orf85Q96MD7 179 aa7.49□□□□□ -1.21
SHROOM3-210ENST00000497440 C8orf49Q96NF6 230 aa7.49□□□□□ -1.21
SHROOM3-210ENST00000497440 TCEAL7Q9BRU2 100 aa7.49□□□□□ -1.21
SHROOM3-210ENST00000497440 TRAV4A0A0B4J268 109 aa7.48□□□□□ -1.21
SHROOM3-210ENST00000497440 IGKV3D-20A0A0C4DH25 116 aa7.48□□□□□ -1.21
SHROOM3-210ENST00000497440 MAP1LC3B2A6NCE7 125 aa7.48□□□□□ -1.21
SHROOM3-210ENST00000497440 F6UZH7 168 aa7.48□□□□□ -1.21
SHROOM3-210ENST00000497440 CIDEAO60543 219 aa7.48□□□□□ -1.21
SHROOM3-210ENST00000497440 GCGP01275 180 aa7.48□□□□□ -1.21
SHROOM3-210ENST00000497440 SMUG1Q53HV7 270 aa7.48□□□□□ -1.21
SHROOM3-210ENST00000497440 C1orf134Q5TEV5 83 aa7.48□□□□□ -1.21
SHROOM3-210ENST00000497440 STOML3Q8TAV4 291 aa7.48□□□□□ -1.21
SHROOM3-210ENST00000497440 MAP1LC3BQ9GZQ8 125 aa7.48□□□□□ -1.21
SHROOM3-210ENST00000497440 PEX7O00628 323 aa7.47□□□□□ -1.21
SHROOM3-210ENST00000497440 PAX4O43316 350 aa7.47□□□□□ -1.21
SHROOM3-210ENST00000497440 BCL2L11O43521 198 aa7.47□□□□□ -1.21
SHROOM3-210ENST00000497440 FGF8P55075 233 aaPredicted RBP7.47□□□□□ -1.21
SHROOM3-210ENST00000497440 MRPL23Q16540 153 aaKnown RBP7.47□□□□□ -1.21
SHROOM3-210ENST00000497440 LYPD5Q6UWN5 251 aa7.47□□□□□ -1.21
SHROOM3-210ENST00000497440 DPPA3Q6W0C5 159 aa7.47□□□□□ -1.21
SHROOM3-210ENST00000497440 Q6ZNX1 250 aa7.47□□□□□ -1.21
SHROOM3-210ENST00000497440 TCTE3Q8IZS6 198 aa7.47□□□□□ -1.21
SHROOM3-210ENST00000497440 NDFIP1Q9BT67 221 aa7.47□□□□□ -1.21
SHROOM3-210ENST00000497440 SDF2L1Q9HCN8 221 aa7.47□□□□□ -1.21
SHROOM3-210ENST00000497440 RPH3ALQ9UNE2 315 aa7.47□□□□□ -1.21
SHROOM3-210ENST00000497440 ZFP30Q9Y2G7 519 aa7.47□□□□□ -1.21
SHROOM3-210ENST00000497440 FAT1Q14517 4588 aa7.46□□□□□ -1.21
SHROOM3-210ENST00000497440 TRAV1-1A0A0B4J248 108 aa7.46□□□□□ -1.22
SHROOM3-210ENST00000497440 TRAV34A0A0B4J273 112 aa7.46□□□□□ -1.22
SHROOM3-210ENST00000497440 FABP5P3A8MUU1 101 aa7.46□□□□□ -1.22
SHROOM3-210ENST00000497440 K7EQD1 137 aa7.46□□□□□ -1.22
SHROOM3-210ENST00000497440 RS1O15537 224 aa7.46□□□□□ -1.22
SHROOM3-210ENST00000497440 SFTA3P0C7M3 94 aa7.46□□□□□ -1.22
SHROOM3-210ENST00000497440 GATA1P15976 413 aaPredicted RBP7.46□□□□□ -1.22
SHROOM3-210ENST00000497440 TIRAPP58753 221 aa7.46□□□□□ -1.22
SHROOM3-210ENST00000497440 LGALSLQ3ZCW2 172 aaPredicted RBP7.46□□□□□ -1.22
SHROOM3-210ENST00000497440 SOHLH1Q5JUK2 328 aa7.46□□□□□ -1.22
SHROOM3-210ENST00000497440 PRNTQ86SH4 94 aa7.46□□□□□ -1.22
SHROOM3-210ENST00000497440 C6orf223Q8N319 242 aa7.46□□□□□ -1.22
SHROOM3-210ENST00000497440 MLST8Q9BVC4 326 aa7.46□□□□□ -1.22
SHROOM3-210ENST00000497440 ICOSQ9Y6W8 199 aa7.46□□□□□ -1.22
SHROOM3-210ENST00000497440 ABCA13Q86UQ4 5058 aa7.45□□□□□ -1.22
SHROOM3-210ENST00000497440 LTAP01374 205 aa7.45□□□□□ -1.22
SHROOM3-210ENST00000497440 IGHV3-53P01767 116 aa7.45□□□□□ -1.22
SHROOM3-210ENST00000497440 ZNF674Q2M3X9 581 aa7.45□□□□□ -1.22
SHROOM3-210ENST00000497440 CFAP126Q5VTH2 177 aa7.45□□□□□ -1.22
SHROOM3-210ENST00000497440 Q6ZRN7 208 aaPredicted RBP7.45□□□□□ -1.22
SHROOM3-210ENST00000497440 TMUB2Q71RG4 321 aa7.45□□□□□ -1.22
SHROOM3-210ENST00000497440 Q86TA4 180 aa7.45□□□□□ -1.22
SHROOM3-210ENST00000497440 SCRT2Q9NQ03 307 aa7.45□□□□□ -1.22
SHROOM3-210ENST00000497440 IL36BQ9NZH7 164 aa7.45□□□□□ -1.22
SHROOM3-210ENST00000497440 TRBV6-4A0A1B0GX49 114 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms