RNA–Protein interactions for RNA: ENST00000496205.1

CLK1-214, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 480 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-214ENST00000496205 LOC107984156A0A0G2JMH3 177 aa1.6□□□□□ -2.15
CLK1-214ENST00000496205 CCDC179H3BU77 68 aa1.6□□□□□ -2.15
CLK1-214ENST00000496205 CCL16O15467 120 aa1.6□□□□□ -2.15
CLK1-214ENST00000496205 CD2P06729 351 aa1.6□□□□□ -2.15
CLK1-214ENST00000496205 ADCYAP1P18509 176 aa1.6□□□□□ -2.15
CLK1-214ENST00000496205 KRTAP12-3P60328 96 aa1.6□□□□□ -2.15
CLK1-214ENST00000496205 PPP3R1P63098 170 aa1.6□□□□□ -2.15
CLK1-214ENST00000496205 LINC00299Q6ZSB3 139 aa1.6□□□□□ -2.15
CLK1-214ENST00000496205 SLC25A26Q70HW3 274 aa1.6□□□□□ -2.15
CLK1-214ENST00000496205 SNX29P2Q8IUI4 249 aa1.6□□□□□ -2.15
CLK1-214ENST00000496205 ARL17AQ8IVW1 177 aa1.6□□□□□ -2.15
CLK1-214ENST00000496205 PLPP5Q8NEB5 264 aa1.6□□□□□ -2.15
CLK1-214ENST00000496205 Q8TAT8 98 aa1.6□□□□□ -2.15
CLK1-214ENST00000496205 DYNLRB2Q8TF09 96 aa1.6□□□□□ -2.15
CLK1-214ENST00000496205 PPDPFLQ8WWR9 84 aa1.6□□□□□ -2.15
CLK1-214ENST00000496205 LINC00052Q96N35 136 aa1.6□□□□□ -2.15
CLK1-214ENST00000496205 NAA38Q9BRA0 125 aaKnown RBP1.6□□□□□ -2.15
CLK1-214ENST00000496205 AGPAT4-IT1Q9H0P7 198 aa1.6□□□□□ -2.15
CLK1-214ENST00000496205 CECR2Q9BXF3 1484 aa1.6□□□□□ -2.15
CLK1-214ENST00000496205 KIAA1549LQ6ZVL6 1849 aa1.59□□□□□ -2.15
CLK1-214ENST00000496205 MGAMO43451 1857 aa1.59□□□□□ -2.15
CLK1-214ENST00000496205 TRBV6-8A0A0A6YYG3 113 aa1.59□□□□□ -2.15
CLK1-214ENST00000496205 PIGBOS1A0A0B4J2F0 54 aa1.59□□□□□ -2.15
CLK1-214ENST00000496205 LOC100130705A0A1B0GUX0 176 aa1.59□□□□□ -2.15
CLK1-214ENST00000496205 F8W1H4 67 aa1.59□□□□□ -2.15
CLK1-214ENST00000496205 GEMIN2O14893 280 aaKnown RBP1.59□□□□□ -2.15
CLK1-214ENST00000496205 TPPP2P59282 170 aa1.59□□□□□ -2.15
CLK1-214ENST00000496205 Q56UQ5 140 aa1.59□□□□□ -2.15
CLK1-214ENST00000496205 C12orf73Q69YU5 71 aa1.59□□□□□ -2.15
CLK1-214ENST00000496205 OR2T2Q6IF00 324 aa1.59□□□□□ -2.15
CLK1-214ENST00000496205 TEX261Q6UWH6 196 aa1.59□□□□□ -2.15
CLK1-214ENST00000496205 C3orf62Q6ZUJ4 267 aa1.59□□□□□ -2.15
CLK1-214ENST00000496205 COA5Q86WW8 74 aa1.59□□□□□ -2.15
CLK1-214ENST00000496205 C5orf17Q8NAS9 161 aa1.59□□□□□ -2.15
CLK1-214ENST00000496205 RPRMQ9NS64 109 aa1.59□□□□□ -2.15
CLK1-214ENST00000496205 TMEM106BQ9NUM4 274 aa1.59□□□□□ -2.15
CLK1-214ENST00000496205 MED9Q9NWA0 146 aa1.59□□□□□ -2.15
CLK1-214ENST00000496205 COA4Q9NYJ1 87 aa1.59□□□□□ -2.15
CLK1-214ENST00000496205 KLK9Q9UKQ9 250 aa1.59□□□□□ -2.15
CLK1-214ENST00000496205 ZFP30Q9Y2G7 519 aa1.59□□□□□ -2.15
CLK1-214ENST00000496205 SERP1Q9Y6X1 66 aa1.59□□□□□ -2.15
CLK1-214ENST00000496205 ATG2AQ2TAZ0 1938 aa1.59□□□□□ -2.15
CLK1-214ENST00000496205 SIPA1L2Q9P2F8 1722 aaPredicted RBP1.59□□□□□ -2.16
CLK1-214ENST00000496205 LAMB4A4D0S4 1761 aa1.59□□□□□ -2.16
CLK1-214ENST00000496205 KIDINS220Q9ULH0 1771 aa1.59□□□□□ -2.16
CLK1-214ENST00000496205 THOC2Q8NI27 1593 aaKnown RBP1.59□□□□□ -2.16
CLK1-214ENST00000496205 KTN1Q86UP2 1357 aaKnown RBP1.59□□□□□ -2.16
CLK1-214ENST00000496205 MPDZO75970 2070 aa1.59□□□□□ -2.16
CLK1-214ENST00000496205 STRCP1A6NGW2 1772 aa1.58□□□□□ -2.16
CLK1-214ENST00000496205 TRBV6-5A0A0K0K1A5 114 aa1.58□□□□□ -2.16
CLK1-214ENST00000496205 A0A1W2PRS3 328 aa1.58□□□□□ -2.16
CLK1-214ENST00000496205 H3BRM9 83 aa1.58□□□□□ -2.16
CLK1-214ENST00000496205 J3QRE1 110 aa1.58□□□□□ -2.16
CLK1-214ENST00000496205 NUPR1O60356 82 aa1.58□□□□□ -2.16
CLK1-214ENST00000496205 MRPS14O60783 128 aaKnown RBP1.58□□□□□ -2.16
CLK1-214ENST00000496205 PITX3O75364 302 aa1.58□□□□□ -2.16
CLK1-214ENST00000496205 PIPP12273 146 aaPredicted RBP1.58□□□□□ -2.16
CLK1-214ENST00000496205 RNASE3P12724 160 aaKnown RBP1.58□□□□□ -2.16
CLK1-214ENST00000496205 RHOHQ15669 191 aa1.58□□□□□ -2.16
CLK1-214ENST00000496205 SPANXN1Q5VSR9 72 aa1.58□□□□□ -2.16
CLK1-214ENST00000496205 MIC13Q5XKP0 118 aa1.58□□□□□ -2.16
CLK1-214ENST00000496205 ZCCHC23Q6ZST2 131 aa1.58□□□□□ -2.16
CLK1-214ENST00000496205 C8orf59Q8N0T1 100 aaPredicted RBP1.58□□□□□ -2.16
CLK1-214ENST00000496205 ACBD7Q8N6N7 88 aa1.58□□□□□ -2.16
CLK1-214ENST00000496205 HEATR5BQ9P2D3 2071 aa1.58□□□□□ -2.16
CLK1-214ENST00000496205 ABCC8Q09428 1581 aa1.58□□□□□ -2.16
CLK1-214ENST00000496205 NUMA1Q14980 2115 aa1.58□□□□□ -2.16
CLK1-214ENST00000496205 PLXNA4Q9HCM2 1894 aa1.58□□□□□ -2.16
CLK1-214ENST00000496205 TOP2BQ02880 1626 aa1.58□□□□□ -2.16
CLK1-214ENST00000496205 HELZP42694 1942 aaKnown RBP1.58□□□□□ -2.16
CLK1-214ENST00000496205 KIF21AQ7Z4S6 1674 aa1.58□□□□□ -2.16
CLK1-214ENST00000496205 CUL9Q8IWT3 2517 aa1.58□□□□□ -2.16
CLK1-214ENST00000496205 FREM3P0C091 2139 aa1.57□□□□□ -2.16
CLK1-214ENST00000496205 IGLV3-32A0A0A0MS00 114 aa1.57□□□□□ -2.16
CLK1-214ENST00000496205 A0A0J9YY99 117 aa1.57□□□□□ -2.16
CLK1-214ENST00000496205 TRBV6-4A0A1B0GX49 114 aa1.57□□□□□ -2.16
CLK1-214ENST00000496205 APOC4-APOC2K7ER74 178 aa1.57□□□□□ -2.16
CLK1-214ENST00000496205 M0R129 80 aa1.57□□□□□ -2.16
CLK1-214ENST00000496205 SNAPC5O75971 98 aa1.57□□□□□ -2.16
CLK1-214ENST00000496205 NDUFB6O95139 128 aa1.57□□□□□ -2.16
CLK1-214ENST00000496205 APOC2P02655 101 aa1.57□□□□□ -2.16
CLK1-214ENST00000496205 Q6AWC8 147 aa1.57□□□□□ -2.16
CLK1-214ENST00000496205 GTF2H5Q6ZYL4 71 aa1.57□□□□□ -2.16
CLK1-214ENST00000496205 NDUFA11Q86Y39 141 aa1.57□□□□□ -2.16
CLK1-214ENST00000496205 SEC11CQ9BY50 192 aa1.57□□□□□ -2.16
CLK1-214ENST00000496205 TARBP1Q13395 1621 aaKnown RBP1.57□□□□□ -2.16
CLK1-214ENST00000496205 MDC1Q14676 2089 aaKnown RBP1.57□□□□□ -2.16
CLK1-214ENST00000496205 DAPK1P53355 1430 aa1.57□□□□□ -2.16
CLK1-214ENST00000496205 KIF13AQ9H1H9 1805 aa1.56□□□□□ -2.16
CLK1-214ENST00000496205 FCGBPQ9Y6R7 5405 aaPredicted RBP1.56□□□□□ -2.16
CLK1-214ENST00000496205 KIAA1549Q9HCM3 1950 aa1.56□□□□□ -2.16
CLK1-214ENST00000496205 MICAL3Q7RTP6 2002 aa1.56□□□□□ -2.16
CLK1-214ENST00000496205 MCRIP1C9JLW8 97 aa1.56□□□□□ -2.16
CLK1-214ENST00000496205 POLR2JP52435 117 aaKnown RBP1.56□□□□□ -2.16
CLK1-214ENST00000496205 SPTSSAQ969W0 71 aa1.56□□□□□ -2.16
CLK1-214ENST00000496205 AKAP11Q9UKA4 1901 aa1.56□□□□□ -2.16
CLK1-214ENST00000496205 CCDC88BA6NC98 1476 aa1.56□□□□□ -2.16
CLK1-214ENST00000496205 DNMBPQ6XZF7 1577 aa1.55□□□□□ -2.16
CLK1-214ENST00000496205 ABCA5Q8WWZ7 1642 aa1.55□□□□□ -2.16
CLK1-214ENST00000496205 CUL7Q14999 1698 aa1.55□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 143.6 ms