RNA–Protein interactions for RNA: ENST00000496071.5

COMMD3-214, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 1,150 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-214ENST00000496071 GNRH2O43555 120 aa11.84□□□□□ -0.51
COMMD3-214ENST00000496071 IFNA7P01567 189 aa11.84□□□□□ -0.51
COMMD3-214ENST00000496071 IGLV2-11P01706 119 aa11.84□□□□□ -0.51
COMMD3-214ENST00000496071 SEC11BP0C7V7 166 aa11.84□□□□□ -0.51
COMMD3-214ENST00000496071 PPT1P50897 306 aa11.84□□□□□ -0.51
COMMD3-214ENST00000496071 SMUG1Q53HV7 270 aa11.84□□□□□ -0.51
COMMD3-214ENST00000496071 PRNTQ86SH4 94 aa11.84□□□□□ -0.51
COMMD3-214ENST00000496071 OR11H4Q8NGC9 324 aa11.84□□□□□ -0.51
COMMD3-214ENST00000496071 MAP1LC3BQ9GZQ8 125 aa11.84□□□□□ -0.51
COMMD3-214ENST00000496071 IGHV3-16A0A0C4DH30 117 aa11.83□□□□□ -0.52
COMMD3-214ENST00000496071 KANTRA0A1W2PQU2 76 aa11.83□□□□□ -0.52
COMMD3-214ENST00000496071 RTL8CO15255 209 aa11.83□□□□□ -0.52
COMMD3-214ENST00000496071 IGHV3-53P01767 116 aa11.83□□□□□ -0.52
COMMD3-214ENST00000496071 TYMSP04818 313 aa11.83□□□□□ -0.52
COMMD3-214ENST00000496071 FGF8P55075 233 aaPredicted RBP11.83□□□□□ -0.52
COMMD3-214ENST00000496071 UBE2G2P60604 165 aa11.83□□□□□ -0.52
COMMD3-214ENST00000496071 EIF5AP63241 154 aaKnown RBP11.83□□□□□ -0.52
COMMD3-214ENST00000496071 C1orf134Q5TEV5 83 aa11.83□□□□□ -0.52
COMMD3-214ENST00000496071 HIST1H2BAQ96A08 127 aa11.83□□□□□ -0.52
COMMD3-214ENST00000496071 C8orf49Q96NF6 230 aa11.83□□□□□ -0.52
COMMD3-214ENST00000496071 HHLA3Q9XRX5 114 aa11.83□□□□□ -0.52
COMMD3-214ENST00000496071 A0A096LPF7 62 aa11.82□□□□□ -0.52
COMMD3-214ENST00000496071 TRGV4A0A0C4DH28 118 aa11.82□□□□□ -0.52
COMMD3-214ENST00000496071 NBDYA0A0U1RRE5 68 aa11.82□□□□□ -0.52
COMMD3-214ENST00000496071 PRSS29PA6NIE9 313 aa11.82□□□□□ -0.52
COMMD3-214ENST00000496071 FAM74A7A6NL05 159 aa11.82□□□□□ -0.52
COMMD3-214ENST00000496071 UMAD1C9J7I0 102 aa11.82□□□□□ -0.52
COMMD3-214ENST00000496071 M0R2P5 195 aa11.82□□□□□ -0.52
COMMD3-214ENST00000496071 GCGP01275 180 aa11.82□□□□□ -0.52
COMMD3-214ENST00000496071 PFN1P07737 140 aaKnown RBP11.82□□□□□ -0.52
COMMD3-214ENST00000496071 FHL2Q14192 279 aa11.82□□□□□ -0.52
COMMD3-214ENST00000496071 ESRGQ1W209 222 aa11.82□□□□□ -0.52
COMMD3-214ENST00000496071 UPK3BQ9BT76 320 aa11.82□□□□□ -0.52
COMMD3-214ENST00000496071 Q9H8V8 135 aa11.82□□□□□ -0.52
COMMD3-214ENST00000496071 ICOSQ9Y6W8 199 aa11.82□□□□□ -0.52
COMMD3-214ENST00000496071 BCL2L11O43521 198 aa11.81□□□□□ -0.52
COMMD3-214ENST00000496071 ZNF80P51504 273 aaPredicted RBP11.81□□□□□ -0.52
COMMD3-214ENST00000496071 CRYBA4P53673 196 aa11.81□□□□□ -0.52
COMMD3-214ENST00000496071 ZNF471Q9BX82 626 aaPredicted RBP11.81□□□□□ -0.52
COMMD3-214ENST00000496071 MRPS16Q9Y3D3 137 aaKnown RBP11.81□□□□□ -0.52
COMMD3-214ENST00000496071 DNAH10Q8IVF4 4471 aa11.81□□□□□ -0.52
COMMD3-214ENST00000496071 TRAV4A0A0B4J268 109 aa11.8□□□□□ -0.52
COMMD3-214ENST00000496071 PEX7O00628 323 aa11.8□□□□□ -0.52
COMMD3-214ENST00000496071 FHITP49789 147 aa11.8□□□□□ -0.52
COMMD3-214ENST00000496071 TCEAL7Q9BRU2 100 aa11.8□□□□□ -0.52
COMMD3-214ENST00000496071 ARL2-SNX15V9GYD0 113 aa11.8□□□□□ -0.52
COMMD3-214ENST00000496071 FRAS1Q86XX4 4008 aa11.79□□□□□ -0.52
COMMD3-214ENST00000496071 TRAV34A0A0B4J273 112 aa11.79□□□□□ -0.52
COMMD3-214ENST00000496071 MRPL23Q16540 153 aaKnown RBP11.79□□□□□ -0.52
COMMD3-214ENST00000496071 DPPA3Q6W0C5 159 aa11.79□□□□□ -0.52
COMMD3-214ENST00000496071 ZNF479Q96JC4 524 aa11.79□□□□□ -0.52
COMMD3-214ENST00000496071 LINC00479Q96M42 142 aa11.79□□□□□ -0.52
COMMD3-214ENST00000496071 FABP5P3A8MUU1 101 aa11.78□□□□□ -0.52
COMMD3-214ENST00000496071 PFDN1O60925 122 aa11.78□□□□□ -0.52
COMMD3-214ENST00000496071 SFTA3P0C7M3 94 aa11.78□□□□□ -0.52
COMMD3-214ENST00000496071 TTC32Q5I0X7 151 aa11.78□□□□□ -0.52
COMMD3-214ENST00000496071 TMUB2Q71RG4 321 aa11.78□□□□□ -0.52
COMMD3-214ENST00000496071 OR4C5Q8NGB2 326 aa11.78□□□□□ -0.52
COMMD3-214ENST00000496071 MBD3L1Q8WWY6 194 aa11.78□□□□□ -0.52
COMMD3-214ENST00000496071 C11orf21Q9P2W6 132 aa11.78□□□□□ -0.52
COMMD3-214ENST00000496071 ZFP30Q9Y2G7 519 aa11.78□□□□□ -0.52
COMMD3-214ENST00000496071 A0A1B0GVY2 172 aa11.77□□□□□ -0.53
COMMD3-214ENST00000496071 CIDEAO60543 219 aa11.77□□□□□ -0.53
COMMD3-214ENST00000496071 ORM1P02763 201 aa11.77□□□□□ -0.53
COMMD3-214ENST00000496071 TPT1P13693 172 aaKnown RBP11.77□□□□□ -0.53
COMMD3-214ENST00000496071 CST9LP1Q5W188 147 aa11.77□□□□□ -0.53
COMMD3-214ENST00000496071 C6orf223Q8N319 242 aa11.77□□□□□ -0.53
COMMD3-214ENST00000496071 FAM213BQ8TBF2 198 aa11.77□□□□□ -0.53
COMMD3-214ENST00000496071 SFT2D1Q8WV19 159 aa11.77□□□□□ -0.53
COMMD3-214ENST00000496071 FMC1Q96HJ9 113 aa11.77□□□□□ -0.53
COMMD3-214ENST00000496071 A0A1W2PPQ1 181 aa11.76□□□□□ -0.53
COMMD3-214ENST00000496071 UBE2G1P62253 170 aa11.76□□□□□ -0.53
COMMD3-214ENST00000496071 LGALSLQ3ZCW2 172 aaPredicted RBP11.76□□□□□ -0.53
COMMD3-214ENST00000496071 ZNF876PQ49A33 203 aa11.76□□□□□ -0.53
COMMD3-214ENST00000496071 NEGR1Q7Z3B1 354 aa11.76□□□□□ -0.53
COMMD3-214ENST00000496071 Q86TA4 180 aa11.76□□□□□ -0.53
COMMD3-214ENST00000496071 PCNPQ8WW12 178 aaKnown RBP11.76□□□□□ -0.53
COMMD3-214ENST00000496071 PTH2Q96A98 100 aa11.76□□□□□ -0.53
COMMD3-214ENST00000496071 TRBV6-1A0A0K0K1D8 114 aa11.75□□□□□ -0.53
COMMD3-214ENST00000496071 C9JCJ5 164 aa11.75□□□□□ -0.53
COMMD3-214ENST00000496071 COX8CQ7Z4L0 72 aa11.75□□□□□ -0.53
COMMD3-214ENST00000496071 C9orf85Q96MD7 179 aa11.75□□□□□ -0.53
COMMD3-214ENST00000496071 PAGE4O60829 102 aa11.74□□□□□ -0.53
COMMD3-214ENST00000496071 H2AFB1P0C5Y9 115 aa11.74□□□□□ -0.53
COMMD3-214ENST00000496071 SRIP30626 198 aa11.74□□□□□ -0.53
COMMD3-214ENST00000496071 LYPD5Q6UWN5 251 aa11.74□□□□□ -0.53
COMMD3-214ENST00000496071 TCTE3Q8IZS6 198 aa11.74□□□□□ -0.53
COMMD3-214ENST00000496071 K7EQD1 137 aa11.73□□□□□ -0.53
COMMD3-214ENST00000496071 SIVA1O15304 175 aa11.73□□□□□ -0.53
COMMD3-214ENST00000496071 GYPEP15421 78 aa11.73□□□□□ -0.53
COMMD3-214ENST00000496071 BTF3P20290 206 aaKnown RBP11.73□□□□□ -0.53
COMMD3-214ENST00000496071 S100A4P26447 101 aaKnown RBP11.73□□□□□ -0.53
COMMD3-214ENST00000496071 EIF5AL1Q6IS14 154 aaKnown RBP11.73□□□□□ -0.53
COMMD3-214ENST00000496071 TXNDC17Q9BRA2 123 aa11.73□□□□□ -0.53
COMMD3-214ENST00000496071 IGKV3D-20A0A0C4DH25 116 aa11.72□□□□□ -0.53
COMMD3-214ENST00000496071 RS1O15537 224 aa11.72□□□□□ -0.53
COMMD3-214ENST00000496071 S100A9P06702 114 aaKnown RBP11.72□□□□□ -0.53
COMMD3-214ENST00000496071 RNASE3P12724 160 aaKnown RBP11.72□□□□□ -0.53
COMMD3-214ENST00000496071 AKR1C3P42330 323 aa11.72□□□□□ -0.53
COMMD3-214ENST00000496071 RAB5CP51148 216 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms