RNA–Protein interactions for RNA: ENST00000496050.1

SSR3-208, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-208ENST00000496050 WDR7Q9Y4E6 1490 aa1.22□□□□□ -2.21
SSR3-208ENST00000496050 PRG4Q92954 1404 aaPredicted RBP1.22□□□□□ -2.21
SSR3-208ENST00000496050 ZGRF1Q86YA3 2104 aa1.21□□□□□ -2.22
SSR3-208ENST00000496050 TRANK1O15050 2925 aa1.21□□□□□ -2.22
SSR3-208ENST00000496050 BBIP1A8MTZ0 92 aa1.21□□□□□ -2.22
SSR3-208ENST00000496050 MIF4GDA9UHW6 222 aaKnown RBP1.21□□□□□ -2.22
SSR3-208ENST00000496050 DLEU1O43261 78 aa1.21□□□□□ -2.22
SSR3-208ENST00000496050 APOC1P02654 83 aa1.21□□□□□ -2.22
SSR3-208ENST00000496050 HLA-DRB4P13762 266 aa1.21□□□□□ -2.22
SSR3-208ENST00000496050 RRAS2P62070 204 aaPredicted RBP1.21□□□□□ -2.22
SSR3-208ENST00000496050 ASB16-AS1Q495Z4 193 aa1.21□□□□□ -2.22
SSR3-208ENST00000496050 CCSMST1Q4G0I0 132 aa1.21□□□□□ -2.22
SSR3-208ENST00000496050 HSD17B12Q53GQ0 312 aa1.21□□□□□ -2.22
SSR3-208ENST00000496050 C5orf17Q8NAS9 161 aa1.21□□□□□ -2.22
SSR3-208ENST00000496050 NABP2Q9BQ15 211 aa1.21□□□□□ -2.22
SSR3-208ENST00000496050 LINC00470Q9BZP3 86 aa1.21□□□□□ -2.22
SSR3-208ENST00000496050 MPC1Q9Y5U8 109 aa1.21□□□□□ -2.22
SSR3-208ENST00000496050 HLA-DRB4X5D2U9 266 aa1.21□□□□□ -2.22
SSR3-208ENST00000496050 KIAA1549LQ6ZVL6 1849 aa1.21□□□□□ -2.22
SSR3-208ENST00000496050 FGD6Q6ZV73 1430 aa1.21□□□□□ -2.22
SSR3-208ENST00000496050 MED12Q93074 2177 aa1.21□□□□□ -2.22
SSR3-208ENST00000496050 SMIM24O75264 130 aa1.2□□□□□ -2.22
SSR3-208ENST00000496050 S100A1P23297 94 aa1.2□□□□□ -2.22
SSR3-208ENST00000496050 ETV6P41212 452 aa1.2□□□□□ -2.22
SSR3-208ENST00000496050 EMX2Q04743 252 aa1.2□□□□□ -2.22
SSR3-208ENST00000496050 Q6ZQY7 126 aa1.2□□□□□ -2.22
SSR3-208ENST00000496050 CTAGE3PQ8IX95 158 aa1.2□□□□□ -2.22
SSR3-208ENST00000496050 TCTEX1D1Q8N7M0 179 aa1.2□□□□□ -2.22
SSR3-208ENST00000496050 DNAJC15Q9Y5T4 150 aa1.2□□□□□ -2.22
SSR3-208ENST00000496050 PTPRDP23468 1912 aa1.2□□□□□ -2.22
SSR3-208ENST00000496050 TRBV30A0A0K0K1B3 111 aa1.19□□□□□ -2.22
SSR3-208ENST00000496050 NPFFO15130 113 aa1.19□□□□□ -2.22
SSR3-208ENST00000496050 SLC25A4P12235 298 aa1.19□□□□□ -2.22
SSR3-208ENST00000496050 COPZ1P61923 177 aa1.19□□□□□ -2.22
SSR3-208ENST00000496050 BLCAPP62952 87 aa1.19□□□□□ -2.22
SSR3-208ENST00000496050 FANCMQ8IYD8 2048 aa1.19□□□□□ -2.22
SSR3-208ENST00000496050 C10orf111Q8N326 155 aa1.19□□□□□ -2.22
SSR3-208ENST00000496050 ARL11Q969Q4 196 aa1.19□□□□□ -2.22
SSR3-208ENST00000496050 SDF2Q99470 211 aa1.19□□□□□ -2.22
SSR3-208ENST00000496050 BANF2Q9H503 90 aa1.19□□□□□ -2.22
SSR3-208ENST00000496050 LOC107984156A0A0G2JMH3 177 aa1.18□□□□□ -2.22
SSR3-208ENST00000496050 IFITM5A6NNB3 132 aa1.18□□□□□ -2.22
SSR3-208ENST00000496050 K7ERU9 68 aa1.18□□□□□ -2.22
SSR3-208ENST00000496050 EDF1O60869 148 aaKnown RBP1.18□□□□□ -2.22
SSR3-208ENST00000496050 HIST1H1BP16401 226 aaKnown RBP1.18□□□□□ -2.22
SSR3-208ENST00000496050 FXYD4P59646 89 aa1.18□□□□□ -2.22
SSR3-208ENST00000496050 WHAMMP3Q1A5X7 153 aa1.18□□□□□ -2.22
SSR3-208ENST00000496050 C3orf62Q6ZUJ4 267 aa1.18□□□□□ -2.22
SSR3-208ENST00000496050 ARL17AQ8IVW1 177 aa1.18□□□□□ -2.22
SSR3-208ENST00000496050 SLC35B3Q9H1N7 401 aa1.18□□□□□ -2.22
SSR3-208ENST00000496050 COMMD3Q9UBI1 195 aa1.18□□□□□ -2.22
SSR3-208ENST00000496050 METTL1Q9UBP6 276 aaKnown RBP1.18□□□□□ -2.22
SSR3-208ENST00000496050 TMEM2Q9UHN6 1383 aa1.18□□□□□ -2.22
SSR3-208ENST00000496050 GPR98Q8WXG9 6306 aa1.18□□□□□ -2.22
SSR3-208ENST00000496050 SIPA1L2Q9P2F8 1722 aaPredicted RBP1.18□□□□□ -2.22
SSR3-208ENST00000496050 KDM5CP41229 1560 aa1.17□□□□□ -2.22
SSR3-208ENST00000496050 VIRMAQ69YN4 1812 aaKnown RBP1.17□□□□□ -2.22
SSR3-208ENST00000496050 PTPRGP23470 1445 aa1.17□□□□□ -2.22
SSR3-208ENST00000496050 FAM236AA0A1B0GUQ0 79 aa1.17□□□□□ -2.22
SSR3-208ENST00000496050 FAM236BA0A1B0GV22 79 aa1.17□□□□□ -2.22
SSR3-208ENST00000496050 FAM92AA1XBS5 289 aa1.17□□□□□ -2.22
SSR3-208ENST00000496050 ZNF670-ZNF695F2Z2N8 137 aa1.17□□□□□ -2.22
SSR3-208ENST00000496050 GNG7O60262 68 aa1.17□□□□□ -2.22
SSR3-208ENST00000496050 IFNGP01579 166 aa1.17□□□□□ -2.22
SSR3-208ENST00000496050 IGHV3-30P01768 117 aa1.17□□□□□ -2.22
SSR3-208ENST00000496050 IGHV3-30-5P0DP03 117 aa1.17□□□□□ -2.22
SSR3-208ENST00000496050 SPTBP11277 2137 aa1.17□□□□□ -2.22
SSR3-208ENST00000496050 SNRPD3P62318 126 aaKnown RBP1.17□□□□□ -2.22
SSR3-208ENST00000496050 TMEM203Q969S6 136 aa1.17□□□□□ -2.22
SSR3-208ENST00000496050 TMEM191AQ9H0A3 160 aa1.17□□□□□ -2.22
SSR3-208ENST00000496050 ROCK2O75116 1388 aaKnown RBP1.17□□□□□ -2.22
SSR3-208ENST00000496050 IBTKQ9P2D0 1353 aaPredicted RBP1.17□□□□□ -2.22
SSR3-208ENST00000496050 MYH1P12882 1939 aa1.17□□□□□ -2.22
SSR3-208ENST00000496050 ARHGAP31Q2M1Z3 1444 aa1.16□□□□□ -2.22
SSR3-208ENST00000496050 SMG6Q86US8 1419 aaKnown RBP1.16□□□□□ -2.22
SSR3-208ENST00000496050 TRBV20-1A0A075B6N2 111 aa1.16□□□□□ -2.22
SSR3-208ENST00000496050 PNMA8CA0A1B0GUJ8 204 aa1.16□□□□□ -2.22
SSR3-208ENST00000496050 NUPR2A6NF83 97 aa1.16□□□□□ -2.22
SSR3-208ENST00000496050 A6NN06 94 aa1.16□□□□□ -2.22
SSR3-208ENST00000496050 CDC42EP2O14613 210 aa1.16□□□□□ -2.22
SSR3-208ENST00000496050 YPEL1O60688 119 aa1.16□□□□□ -2.22
SSR3-208ENST00000496050 IGF2P01344 180 aa1.16□□□□□ -2.22
SSR3-208ENST00000496050 CD3DP04234 171 aa1.16□□□□□ -2.22
SSR3-208ENST00000496050 S100PP25815 95 aa1.16□□□□□ -2.22
SSR3-208ENST00000496050 PLGLB1Q02325 96 aa1.16□□□□□ -2.22
SSR3-208ENST00000496050 ATOH7Q8N100 152 aa1.16□□□□□ -2.22
SSR3-208ENST00000496050 SMIM7Q9BQ49 75 aa1.16□□□□□ -2.22
SSR3-208ENST00000496050 SAR1AQ9NR31 198 aa1.16□□□□□ -2.22
SSR3-208ENST00000496050 NOTCH1P46531 2555 aa1.16□□□□□ -2.22
SSR3-208ENST00000496050 SRCAPQ6ZRS2 3230 aa1.16□□□□□ -2.22
SSR3-208ENST00000496050 CDK5RAP2Q96SN8 1893 aa1.16□□□□□ -2.22
SSR3-208ENST00000496050 CITO14578 2027 aa1.15□□□□□ -2.22
SSR3-208ENST00000496050 A0A1W2PPB8 328 aa1.15□□□□□ -2.23
SSR3-208ENST00000496050 A0A1W2PRS3 328 aa1.15□□□□□ -2.23
SSR3-208ENST00000496050 KIR3DP1A8MWS1 328 aa1.15□□□□□ -2.23
SSR3-208ENST00000496050 M0R2P5 195 aa1.15□□□□□ -2.23
SSR3-208ENST00000496050 APODP05090 189 aa1.15□□□□□ -2.23
SSR3-208ENST00000496050 BTG2P78543 158 aa1.15□□□□□ -2.23
SSR3-208ENST00000496050 SCIMPQ6UWF3 145 aa1.15□□□□□ -2.23
SSR3-208ENST00000496050 ATP11AUNQ6ZP68 121 aa1.15□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms