RNA–Protein interactions for RNA: ENST00000495835.1

HLA-C-209, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,073 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-209ENST00000495835 SUMO1P63165 101 aaKnown RBP16.69■□□□□ 0.26
HLA-C-209ENST00000495835 SDF2L1Q9HCN8 221 aa16.69■□□□□ 0.26
HLA-C-209ENST00000495835 NAGKQ9UJ70 344 aa16.69■□□□□ 0.26
HLA-C-209ENST00000495835 EPDR1Q9UM22 224 aa16.69■□□□□ 0.26
HLA-C-209ENST00000495835 TRGV4A0A0C4DH28 118 aa16.68■□□□□ 0.26
HLA-C-209ENST00000495835 IGHV3-16A0A0C4DH30 117 aa16.68■□□□□ 0.26
HLA-C-209ENST00000495835 M0R2P5 195 aa16.68■□□□□ 0.26
HLA-C-209ENST00000495835 TNP2Q05952 138 aa16.68■□□□□ 0.26
HLA-C-209ENST00000495835 TRAV4A0A0B4J268 109 aa16.67■□□□□ 0.26
HLA-C-209ENST00000495835 GNRH2O43555 120 aa16.67■□□□□ 0.26
HLA-C-209ENST00000495835 CYB561D1Q8N8Q1 229 aa16.67■□□□□ 0.26
HLA-C-209ENST00000495835 C8orf49Q96NF6 230 aa16.67■□□□□ 0.26
HLA-C-209ENST00000495835 PSG8Q9UQ74 426 aa16.67■□□□□ 0.26
HLA-C-209ENST00000495835 CTXND1A0A1B0GTU2 59 aa16.66■□□□□ 0.26
HLA-C-209ENST00000495835 F6UZH7 168 aa16.66■□□□□ 0.26
HLA-C-209ENST00000495835 SIVA1O15304 175 aa16.66■□□□□ 0.26
HLA-C-209ENST00000495835 ORM1P02763 201 aa16.66■□□□□ 0.26
HLA-C-209ENST00000495835 TYMSP04818 313 aa16.66■□□□□ 0.26
HLA-C-209ENST00000495835 NEGR1Q7Z3B1 354 aa16.66■□□□□ 0.26
HLA-C-209ENST00000495835 TMEM75Q8N9X5 138 aa16.66■□□□□ 0.26
HLA-C-209ENST00000495835 ZNF479Q96JC4 524 aa16.66■□□□□ 0.26
HLA-C-209ENST00000495835 NKX6-2Q9C056 277 aaPredicted RBP16.66■□□□□ 0.26
HLA-C-209ENST00000495835 GGTLC3B5MD39 225 aa16.65■□□□□ 0.26
HLA-C-209ENST00000495835 FLI1Q01543 452 aaPredicted RBP16.65■□□□□ 0.26
HLA-C-209ENST00000495835 ZFP69Q49AA0 526 aa16.65■□□□□ 0.26
HLA-C-209ENST00000495835 SAPCD1Q5SSQ6 148 aa16.65■□□□□ 0.26
HLA-C-209ENST00000495835 KRTAP1-5Q9BYS1 174 aa16.65■□□□□ 0.26
HLA-C-209ENST00000495835 G3V3Q6 166 aa16.64■□□□□ 0.25
HLA-C-209ENST00000495835 CIDEAO60543 219 aa16.64■□□□□ 0.25
HLA-C-209ENST00000495835 IGLV2-11P01706 119 aa16.64■□□□□ 0.25
HLA-C-209ENST00000495835 SMUG1Q53HV7 270 aa16.64■□□□□ 0.25
HLA-C-209ENST00000495835 LYPD5Q6UWN5 251 aa16.64■□□□□ 0.25
HLA-C-209ENST00000495835 OR4C5Q8NGB2 326 aa16.64■□□□□ 0.25
HLA-C-209ENST00000495835 PFN1P07737 140 aaKnown RBP16.63■□□□□ 0.25
HLA-C-209ENST00000495835 SFTA3P0C7M3 94 aa16.63■□□□□ 0.25
HLA-C-209ENST00000495835 SGK494Q96LW2 274 aa16.63■□□□□ 0.25
HLA-C-209ENST00000495835 K7EQD1 137 aa16.62■□□□□ 0.25
HLA-C-209ENST00000495835 GCGP01275 180 aa16.62■□□□□ 0.25
HLA-C-209ENST00000495835 ZNF726P1Q15940 193 aa16.62■□□□□ 0.25
HLA-C-209ENST00000495835 AKR1C8PQ5T2L2 129 aa16.62■□□□□ 0.25
HLA-C-209ENST00000495835 PCNPQ8WW12 178 aaKnown RBP16.62■□□□□ 0.25
HLA-C-209ENST00000495835 C9JCJ5 164 aa16.61■□□□□ 0.25
HLA-C-209ENST00000495835 K7EP13 123 aa16.61■□□□□ 0.25
HLA-C-209ENST00000495835 NXPH4O95158 308 aa16.61■□□□□ 0.25
HLA-C-209ENST00000495835 SRIP30626 198 aa16.61■□□□□ 0.25
HLA-C-209ENST00000495835 ZNF80P51504 273 aaPredicted RBP16.61■□□□□ 0.25
HLA-C-209ENST00000495835 SH2D6Q7Z4S9 175 aa16.61■□□□□ 0.25
HLA-C-209ENST00000495835 PTH2Q96A98 100 aa16.61■□□□□ 0.25
HLA-C-209ENST00000495835 TXNDC17Q9BRA2 123 aa16.61■□□□□ 0.25
HLA-C-209ENST00000495835 ARPC5O15511 151 aa16.6■□□□□ 0.25
HLA-C-209ENST00000495835 PPT1P50897 306 aa16.6■□□□□ 0.25
HLA-C-209ENST00000495835 PRNTQ86SH4 94 aa16.6■□□□□ 0.25
HLA-C-209ENST00000495835 HIST1H2BAQ96A08 127 aa16.59■□□□□ 0.25
HLA-C-209ENST00000495835 CYTL1Q9NRR1 136 aa16.59■□□□□ 0.25
HLA-C-209ENST00000495835 GYPEP15421 78 aa16.58■□□□□ 0.24
HLA-C-209ENST00000495835 C11orf21Q9P2W6 132 aa16.58■□□□□ 0.24
HLA-C-209ENST00000495835 TRAV9-2A0A087WT02 112 aa16.57■□□□□ 0.24
HLA-C-209ENST00000495835 IFNA7P01567 189 aa16.57■□□□□ 0.24
HLA-C-209ENST00000495835 ZNF345Q14585 488 aa16.57■□□□□ 0.24
HLA-C-209ENST00000495835 ZNF876PQ49A33 203 aa16.57■□□□□ 0.24
HLA-C-209ENST00000495835 ZNF575Q86XF7 245 aa16.57■□□□□ 0.24
HLA-C-209ENST00000495835 FAM74A7A6NL05 159 aa16.56■□□□□ 0.24
HLA-C-209ENST00000495835 GATA1P15976 413 aaPredicted RBP16.56■□□□□ 0.24
HLA-C-209ENST00000495835 C9orf85Q96MD7 179 aa16.56■□□□□ 0.24
HLA-C-209ENST00000495835 RYR1P21817 5038 aa16.55■□□□□ 0.24
HLA-C-209ENST00000495835 FABP5P3A8MUU1 101 aa16.55■□□□□ 0.24
HLA-C-209ENST00000495835 C16orf90A8MZG2 172 aa16.55■□□□□ 0.24
HLA-C-209ENST00000495835 LINC00315P59091 139 aa16.55■□□□□ 0.24
HLA-C-209ENST00000495835 TCEAL7Q9BRU2 100 aa16.55■□□□□ 0.24
HLA-C-209ENST00000495835 BOLA1Q9Y3E2 137 aa16.55■□□□□ 0.24
HLA-C-209ENST00000495835 HMSDA8MTL9 139 aa16.54■□□□□ 0.24
HLA-C-209ENST00000495835 PEX7O00628 323 aa16.54■□□□□ 0.24
HLA-C-209ENST00000495835 RS1O15537 224 aa16.54■□□□□ 0.24
HLA-C-209ENST00000495835 FHITP49789 147 aa16.54■□□□□ 0.24
HLA-C-209ENST00000495835 TIRAPP58753 221 aa16.54■□□□□ 0.24
HLA-C-209ENST00000495835 PIK3CD-AS1Q5SR53 167 aa16.54■□□□□ 0.24
HLA-C-209ENST00000495835 KCNRGQ8N5I3 272 aa16.54■□□□□ 0.24
HLA-C-209ENST00000495835 STOML3Q8TAV4 291 aa16.54■□□□□ 0.24
HLA-C-209ENST00000495835 LINC00479Q96M42 142 aa16.54■□□□□ 0.24
HLA-C-209ENST00000495835 LY96Q9Y6Y9 160 aa16.54■□□□□ 0.24
HLA-C-209ENST00000495835 ARL2-SNX15V9GYD0 113 aa16.54■□□□□ 0.24
HLA-C-209ENST00000495835 MAP1LC3B2A6NCE7 125 aa16.53■□□□□ 0.24
HLA-C-209ENST00000495835 UBE2G2P60604 165 aa16.53■□□□□ 0.24
HLA-C-209ENST00000495835 CFAP126Q5VTH2 177 aa16.53■□□□□ 0.24
HLA-C-209ENST00000495835 COX8CQ7Z4L0 72 aa16.53■□□□□ 0.24
HLA-C-209ENST00000495835 NFE4Q86UQ8 179 aa16.53■□□□□ 0.24
HLA-C-209ENST00000495835 MAP1LC3BQ9GZQ8 125 aa16.53■□□□□ 0.24
HLA-C-209ENST00000495835 ZFP30Q9Y2G7 519 aa16.53■□□□□ 0.24
HLA-C-209ENST00000495835 LRP1BQ9NZR2 4599 aa16.52■□□□□ 0.24
HLA-C-209ENST00000495835 TRBV6-4A0A1B0GX49 114 aa16.52■□□□□ 0.24
HLA-C-209ENST00000495835 FGF8P55075 233 aaPredicted RBP16.52■□□□□ 0.24
HLA-C-209ENST00000495835 TRAV34A0A0B4J273 112 aa16.51■□□□□ 0.23
HLA-C-209ENST00000495835 SEC11BP0C7V7 166 aa16.51■□□□□ 0.23
HLA-C-209ENST00000495835 RNASE3P12724 160 aaKnown RBP16.51■□□□□ 0.23
HLA-C-209ENST00000495835 Q6ZRN7 208 aaPredicted RBP16.51■□□□□ 0.23
HLA-C-209ENST00000495835 PCLOQ9Y6V0 5065 aa16.51■□□□□ 0.23
HLA-C-209ENST00000495835 A0A0D9SG52 128 aa16.5■□□□□ 0.23
HLA-C-209ENST00000495835 UMAD1C9J7I0 102 aa16.5■□□□□ 0.23
HLA-C-209ENST00000495835 CDK2AP2O75956 126 aa16.5■□□□□ 0.23
HLA-C-209ENST00000495835 DNAH10OSP0CZ25 163 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms