RNA–Protein interactions for RNA: ENST00000495630.1

TMEM53-209, Transcript of transmembrane protein 53, human

TSL 2

Gene TMEM53, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMEM53-209	ENST00000495630	NAGK	Q9UJ70	344 aa		11.65	□□□□□ -0.54
TMEM53-209	ENST00000495630	OR7C2	O60412	319 aa		11.64	□□□□□ -0.55
TMEM53-209	ENST00000495630	IGHV3-30	P01768	117 aa		11.64	□□□□□ -0.55
TMEM53-209	ENST00000495630	IGHV3-33	P01772	117 aa		11.64	□□□□□ -0.55
TMEM53-209	ENST00000495630	IGHV3-30-3	P0DP02	117 aa		11.64	□□□□□ -0.55
TMEM53-209	ENST00000495630	IGHV3-30-5	P0DP03	117 aa		11.64	□□□□□ -0.55
TMEM53-209	ENST00000495630	SLC25A29	Q8N8R3	303 aa		11.64	□□□□□ -0.55
TMEM53-209	ENST00000495630	SYT8	Q8NBV8	401 aa		11.64	□□□□□ -0.55
TMEM53-209	ENST00000495630	KCNIP2	Q9NS61	270 aa		11.64	□□□□□ -0.55
TMEM53-209	ENST00000495630	TRAV6	A0A075B6T7	132 aa		11.63	□□□□□ -0.55
TMEM53-209	ENST00000495630	TRAV21	A0A0B4J279	112 aa		11.63	□□□□□ -0.55
TMEM53-209	ENST00000495630	TRBV6-4	A0A1B0GX49	114 aa		11.63	□□□□□ -0.55
TMEM53-209	ENST00000495630	FBLL1	A6NHQ2	334 aa	Known RBP	11.63	□□□□□ -0.55
TMEM53-209	ENST00000495630	LYRM1	O43325	122 aa		11.63	□□□□□ -0.55
TMEM53-209	ENST00000495630	OR5C1	Q8NGR4	320 aa		11.63	□□□□□ -0.55
TMEM53-209	ENST00000495630	ATP5S	Q99766	215 aa		11.63	□□□□□ -0.55
TMEM53-209	ENST00000495630	KCNS1	Q96KK3	526 aa		11.62	□□□□□ -0.55
TMEM53-209	ENST00000495630	RBM38	Q9H0Z9	239 aa	Known RBP	11.62	□□□□□ -0.55
TMEM53-209	ENST00000495630	RHOH	Q15669	191 aa		11.61	□□□□□ -0.55
TMEM53-209	ENST00000495630	WDR61	Q9GZS3	305 aa	Known RBP	11.61	□□□□□ -0.55
TMEM53-209	ENST00000495630	GTSF1L	Q9H1H1	148 aa		11.61	□□□□□ -0.55
TMEM53-209	ENST00000495630	SDF2L1	Q9HCN8	221 aa		11.61	□□□□□ -0.55
TMEM53-209	ENST00000495630	NUDT15	Q9NV35	164 aa		11.61	□□□□□ -0.55
TMEM53-209	ENST00000495630	TRAV8-3	A0A0A6YYJ7	113 aa		11.6	□□□□□ -0.55
TMEM53-209	ENST00000495630	C17orf112	F2Z3M2	114 aa		11.6	□□□□□ -0.55
TMEM53-209	ENST00000495630	RS1	O15537	224 aa		11.6	□□□□□ -0.55
TMEM53-209	ENST00000495630	TYMS	P04818	313 aa		11.6	□□□□□ -0.55
TMEM53-209	ENST00000495630	UBE2L3	P68036	154 aa	Known RBP	11.6	□□□□□ -0.55
TMEM53-209	ENST00000495630	WFDC2	Q14508	124 aa		11.6	□□□□□ -0.55
TMEM53-209	ENST00000495630	ZNF876P	Q49A33	203 aa		11.6	□□□□□ -0.55
TMEM53-209	ENST00000495630	ARL6IP6	Q8N6S5	226 aa		11.6	□□□□□ -0.55
TMEM53-209	ENST00000495630	ATP6V0E2	Q8NHE4	81 aa		11.6	□□□□□ -0.55
TMEM53-209	ENST00000495630	HYLS1	Q96M11	299 aa		11.6	□□□□□ -0.55
TMEM53-209	ENST00000495630	OTOR	Q9NRC9	128 aa		11.6	□□□□□ -0.55
TMEM53-209	ENST00000495630	DNAH8	Q96JB1	4490 aa		11.6	□□□□□ -0.55
TMEM53-209	ENST00000495630	PGP	A6NDG6	321 aa		11.59	□□□□□ -0.55
TMEM53-209	ENST00000495630	OXT	P01178	125 aa		11.59	□□□□□ -0.55
TMEM53-209	ENST00000495630	H2AFB2	P0C5Z0	115 aa		11.59	□□□□□ -0.55
TMEM53-209	ENST00000495630	CFAP126	Q5VTH2	177 aa		11.59	□□□□□ -0.55
TMEM53-209	ENST00000495630	CMTM2	Q8TAZ6	248 aa		11.59	□□□□□ -0.55
TMEM53-209	ENST00000495630	SH3BGRL3	Q9H299	93 aa		11.59	□□□□□ -0.55
TMEM53-209	ENST00000495630	TAS2R45	P59539	299 aa		11.58	□□□□□ -0.56
TMEM53-209	ENST00000495630	KHDC3L	Q587J8	217 aa		11.58	□□□□□ -0.56
TMEM53-209	ENST00000495630	FAM74A1	Q5RGS3	127 aa		11.58	□□□□□ -0.56
TMEM53-209	ENST00000495630	ASB13	Q8WXK3	278 aa		11.58	□□□□□ -0.56
TMEM53-209	ENST00000495630	TVP23C	Q96ET8	276 aa		11.58	□□□□□ -0.56
TMEM53-209	ENST00000495630	NMES1	Q9C002	83 aa		11.58	□□□□□ -0.56
TMEM53-209	ENST00000495630	TREM1	Q9NP99	234 aa		11.58	□□□□□ -0.56
TMEM53-209	ENST00000495630	ASAH1	Q13510	395 aa		11.57	□□□□□ -0.56
TMEM53-209	ENST00000495630	TOR2A	Q5JU69	321 aa		11.57	□□□□□ -0.56
TMEM53-209	ENST00000495630	COX11	Q9Y6N1	276 aa		11.57	□□□□□ -0.56
TMEM53-209	ENST00000495630	LECT2	O14960	151 aa		11.56	□□□□□ -0.56
TMEM53-209	ENST00000495630	MGST1	P10620	155 aa	Known RBP	11.56	□□□□□ -0.56
TMEM53-209	ENST00000495630	DPPA3	Q6W0C5	159 aa		11.56	□□□□□ -0.56
TMEM53-209	ENST00000495630	GOLT1A	Q6ZVE7	132 aa		11.56	□□□□□ -0.56
TMEM53-209	ENST00000495630	SCX	Q7RTU7	201 aa		11.56	□□□□□ -0.56
TMEM53-209	ENST00000495630	PTH2	Q96A98	100 aa		11.56	□□□□□ -0.56
TMEM53-209	ENST00000495630	MBD2	Q9UBB5	411 aa		11.56	□□□□□ -0.56
TMEM53-209	ENST00000495630	IGLV2-33	A0A075B6J2	118 aa	Predicted RBP	11.55	□□□□□ -0.56
TMEM53-209	ENST00000495630	IGHV3-73	A0A0B4J1V6	119 aa		11.55	□□□□□ -0.56
TMEM53-209	ENST00000495630		F6UZH7	168 aa		11.55	□□□□□ -0.56
TMEM53-209	ENST00000495630	FFAR4	Q5NUL3	377 aa		11.55	□□□□□ -0.56
TMEM53-209	ENST00000495630	CHAC1	Q9BUX1	264 aa		11.55	□□□□□ -0.56
TMEM53-209	ENST00000495630	RPH3AL	Q9UNE2	315 aa		11.55	□□□□□ -0.56
TMEM53-209	ENST00000495630	KRTAP10-4	P60372	401 aa	Predicted RBP	11.54	□□□□□ -0.56
TMEM53-209	ENST00000495630		Q8N976	141 aa		11.54	□□□□□ -0.56
TMEM53-209	ENST00000495630	BAALC	Q8WXS3	180 aa		11.54	□□□□□ -0.56
TMEM53-209	ENST00000495630	OR5AC2	Q9NZP5	309 aa		11.54	□□□□□ -0.56
TMEM53-209	ENST00000495630	RNF222	A6NCQ9	220 aa		11.53	□□□□□ -0.56
TMEM53-209	ENST00000495630	RBFOX3	A6NFN3	312 aa		11.53	□□□□□ -0.56
TMEM53-209	ENST00000495630	GGTLC3	B5MD39	225 aa		11.53	□□□□□ -0.56
TMEM53-209	ENST00000495630	TAAR5	O14804	337 aa		11.53	□□□□□ -0.56
TMEM53-209	ENST00000495630	DAZ4	Q86SG3	579 aa	Known RBP	11.53	□□□□□ -0.56
TMEM53-209	ENST00000495630		Q8N3U1	123 aa		11.53	□□□□□ -0.56
TMEM53-209	ENST00000495630	DAZ3	Q9NR90	486 aa	Known RBP	11.53	□□□□□ -0.56
TMEM53-209	ENST00000495630	TRAV8-1	A0A0A6YYK1	113 aa		11.52	□□□□□ -0.57
TMEM53-209	ENST00000495630	FAM240B	A0A1B0GVZ2	78 aa		11.52	□□□□□ -0.57
TMEM53-209	ENST00000495630	PGPEP1L	A6NFU8	196 aa		11.52	□□□□□ -0.57
TMEM53-209	ENST00000495630		H0YIZ8	118 aa		11.52	□□□□□ -0.57
TMEM53-209	ENST00000495630	ACOT6	Q3I5F7	207 aa	Predicted RBP	11.52	□□□□□ -0.57
TMEM53-209	ENST00000495630	LINC01620	Q4KN68	170 aa		11.52	□□□□□ -0.57
TMEM53-209	ENST00000495630	RMI2	Q96E14	147 aa		11.52	□□□□□ -0.57
TMEM53-209	ENST00000495630	C9orf85	Q96MD7	179 aa		11.52	□□□□□ -0.57
TMEM53-209	ENST00000495630	PLA2G2D	Q9UNK4	145 aa		11.52	□□□□□ -0.57
TMEM53-209	ENST00000495630		A0A087WWC5	75 aa		11.51	□□□□□ -0.57
TMEM53-209	ENST00000495630	SIX6	O95475	246 aa		11.51	□□□□□ -0.57
TMEM53-209	ENST00000495630	CYCS	P99999	105 aa	Known RBP	11.51	□□□□□ -0.57
TMEM53-209	ENST00000495630	ZNF506	Q5JVG8	444 aa		11.51	□□□□□ -0.57
TMEM53-209	ENST00000495630	PQLC2	Q6ZP29	291 aa		11.51	□□□□□ -0.57
TMEM53-209	ENST00000495630	SCGB1C1	Q8TD33	95 aa		11.51	□□□□□ -0.57
TMEM53-209	ENST00000495630	NDFIP1	Q9BT67	221 aa		11.51	□□□□□ -0.57
TMEM53-209	ENST00000495630	C11orf21	Q9P2W6	132 aa		11.51	□□□□□ -0.57
TMEM53-209	ENST00000495630	LRP1	Q07954	4544 aa	Known RBP	11.5	□□□□□ -0.57
TMEM53-209	ENST00000495630	SERTM2	A0A1B0GWG4	89 aa		11.5	□□□□□ -0.57
TMEM53-209	ENST00000495630	LRRC37A5P	Q49AS3	106 aa		11.5	□□□□□ -0.57
TMEM53-209	ENST00000495630	ZFP2	Q6ZN57	461 aa		11.5	□□□□□ -0.57
TMEM53-209	ENST00000495630	CIRBP-AS1	Q8TBR5	109 aa		11.5	□□□□□ -0.57
TMEM53-209	ENST00000495630	HMCN2	Q8NDA2	5059 aa		11.49	□□□□□ -0.57
TMEM53-209	ENST00000495630		A0A1W2PPV4	95 aa		11.49	□□□□□ -0.57
TMEM53-209	ENST00000495630	SEC11B	P0C7V7	166 aa		11.49	□□□□□ -0.57

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