RNA–Protein interactions for RNA: ENST00000495515.1

HDAC6-235, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-235ENST00000495515 NOP10Q9NPE3 64 aaKnown RBP12.23□□□□□ -0.45
HDAC6-235ENST00000495515 GSN-AS1Q9NRJ2 163 aa12.23□□□□□ -0.45
HDAC6-235ENST00000495515 TCL1AP56279 114 aa12.22□□□□□ -0.45
HDAC6-235ENST00000495515 PEA15Q15121 130 aa12.22□□□□□ -0.45
HDAC6-235ENST00000495515 ZNF674Q2M3X9 581 aa12.22□□□□□ -0.45
HDAC6-235ENST00000495515 C11orf72Q8NBR9 251 aa12.22□□□□□ -0.45
HDAC6-235ENST00000495515 SMDT1Q9H4I9 107 aa12.22□□□□□ -0.45
HDAC6-235ENST00000495515 BIN3Q9NQY0 253 aa12.22□□□□□ -0.45
HDAC6-235ENST00000495515 TP53TG3Q9ULZ0 132 aa12.22□□□□□ -0.45
HDAC6-235ENST00000495515 RAB19A4D1S5 217 aa12.21□□□□□ -0.45
HDAC6-235ENST00000495515 SH2D1AO60880 128 aa12.21□□□□□ -0.45
HDAC6-235ENST00000495515 ORM1P02763 201 aa12.21□□□□□ -0.45
HDAC6-235ENST00000495515 C12orf74Q32Q52 190 aa12.21□□□□□ -0.45
HDAC6-235ENST00000495515 PARLQ9H300 379 aa12.21□□□□□ -0.45
HDAC6-235ENST00000495515 NUPR2A6NF83 97 aa12.2□□□□□ -0.46
HDAC6-235ENST00000495515 C9JCJ5 164 aa12.2□□□□□ -0.46
HDAC6-235ENST00000495515 GNRH2O43555 120 aa12.2□□□□□ -0.46
HDAC6-235ENST00000495515 TYMSP04818 313 aa12.2□□□□□ -0.46
HDAC6-235ENST00000495515 DEFB130BP0DP73 79 aa12.2□□□□□ -0.46
HDAC6-235ENST00000495515 DEFB130AP0DP74 79 aa12.2□□□□□ -0.46
HDAC6-235ENST00000495515 MGST1P10620 155 aaKnown RBP12.2□□□□□ -0.46
HDAC6-235ENST00000495515 CRIP1P50238 77 aa12.2□□□□□ -0.46
HDAC6-235ENST00000495515 CEBPGP53567 150 aa12.2□□□□□ -0.46
HDAC6-235ENST00000495515 CLLU1Q5K131 121 aa12.2□□□□□ -0.46
HDAC6-235ENST00000495515 PHLDA1Q8WV24 401 aaPredicted RBP12.2□□□□□ -0.46
HDAC6-235ENST00000495515 SPXQ9BT56 116 aa12.2□□□□□ -0.46
HDAC6-235ENST00000495515 TRAV10A0A0B4J240 114 aa12.19□□□□□ -0.46
HDAC6-235ENST00000495515 B4DEV8 164 aa12.19□□□□□ -0.46
HDAC6-235ENST00000495515 IFITM2Q01629 132 aa12.19□□□□□ -0.46
HDAC6-235ENST00000495515 LGALS9BQ3B8N2 356 aa12.19□□□□□ -0.46
HDAC6-235ENST00000495515 ZFAND6Q6FIF0 208 aa12.19□□□□□ -0.46
HDAC6-235ENST00000495515 PRR27Q6MZM9 219 aa12.19□□□□□ -0.46
HDAC6-235ENST00000495515 Q6ZTC4 211 aa12.19□□□□□ -0.46
HDAC6-235ENST00000495515 DAZAP1Q96EP5 407 aaKnown RBP12.19□□□□□ -0.46
HDAC6-235ENST00000495515 MDFICQ9P1T7 246 aa12.19□□□□□ -0.46
HDAC6-235ENST00000495515 C11orf21Q9P2W6 132 aa12.19□□□□□ -0.46
HDAC6-235ENST00000495515 KLK5Q9Y337 293 aaPredicted RBP12.19□□□□□ -0.46
HDAC6-235ENST00000495515 TRGV1A0A0A0MS02 117 aa12.18□□□□□ -0.46
HDAC6-235ENST00000495515 IGHV3-16A0A0C4DH30 117 aa12.18□□□□□ -0.46
HDAC6-235ENST00000495515 SRP19P09132 144 aaKnown RBP12.18□□□□□ -0.46
HDAC6-235ENST00000495515 S100A4P26447 101 aaKnown RBP12.18□□□□□ -0.46
HDAC6-235ENST00000495515 TRBV20OR9-2A0A075B6H5 130 aa12.17□□□□□ -0.46
HDAC6-235ENST00000495515 IGKV3D-20A0A0C4DH25 116 aa12.17□□□□□ -0.46
HDAC6-235ENST00000495515 M0R036 132 aa12.17□□□□□ -0.46
HDAC6-235ENST00000495515 SPINK4O60575 86 aa12.17□□□□□ -0.46
HDAC6-235ENST00000495515 ASIPP42127 132 aa12.17□□□□□ -0.46
HDAC6-235ENST00000495515 OR5I1Q13606 314 aa12.17□□□□□ -0.46
HDAC6-235ENST00000495515 LINC01559Q495D7 138 aa12.17□□□□□ -0.46
HDAC6-235ENST00000495515 CEMP1Q6PRD7 247 aaPredicted RBP12.17□□□□□ -0.46
HDAC6-235ENST00000495515 SMIM7Q9BQ49 75 aa12.17□□□□□ -0.46
HDAC6-235ENST00000495515 TRGV2A0A075B6R0 118 aa12.16□□□□□ -0.46
HDAC6-235ENST00000495515 DEFB131BA0A096LNP1 70 aa12.16□□□□□ -0.46
HDAC6-235ENST00000495515 GAGE12BA1L429 117 aa12.16□□□□□ -0.46
HDAC6-235ENST00000495515 ZNF727A8MUV8 499 aa12.16□□□□□ -0.46
HDAC6-235ENST00000495515 KRBOX1C9JBD0 128 aa12.16□□□□□ -0.46
HDAC6-235ENST00000495515 GAGE7O76087 117 aa12.16□□□□□ -0.46
HDAC6-235ENST00000495515 IGLV2-8P01709 118 aa12.16□□□□□ -0.46
HDAC6-235ENST00000495515 GAGE12FP0CL80 117 aa12.16□□□□□ -0.46
HDAC6-235ENST00000495515 GAGE12GP0CL81 117 aa12.16□□□□□ -0.46
HDAC6-235ENST00000495515 GAGE12IP0CL82 117 aa12.16□□□□□ -0.46
HDAC6-235ENST00000495515 CASC10Q5T4H9 136 aa12.16□□□□□ -0.46
HDAC6-235ENST00000495515 LINC00612Q8N6U2 182 aa12.16□□□□□ -0.46
HDAC6-235ENST00000495515 M0R2P5 195 aa12.15□□□□□ -0.46
HDAC6-235ENST00000495515 ATP5G1P05496 136 aa12.15□□□□□ -0.46
HDAC6-235ENST00000495515 FAM74A3Q4VXF1 159 aa12.15□□□□□ -0.46
HDAC6-235ENST00000495515 Q6ZTI0 123 aa12.15□□□□□ -0.46
HDAC6-235ENST00000495515 LY96Q9Y6Y9 160 aa12.15□□□□□ -0.46
HDAC6-235ENST00000495515 PGPEP1LA6NFU8 196 aa12.14□□□□□ -0.47
HDAC6-235ENST00000495515 OCC1Q8TAD7 63 aa12.14□□□□□ -0.47
HDAC6-235ENST00000495515 C18orf15Q96N68 181 aa12.14□□□□□ -0.47
HDAC6-235ENST00000495515 MRPL16Q9NX20 251 aaKnown RBP12.14□□□□□ -0.47
HDAC6-235ENST00000495515 TMSB15BA0A087X1C1 80 aa12.13□□□□□ -0.47
HDAC6-235ENST00000495515 P01737 135 aa12.13□□□□□ -0.47
HDAC6-235ENST00000495515 CXCL1P09341 107 aa12.13□□□□□ -0.47
HDAC6-235ENST00000495515 HTN3P15516 51 aa12.13□□□□□ -0.47
HDAC6-235ENST00000495515 RPS20P60866 119 aaKnown RBP12.13□□□□□ -0.47
HDAC6-235ENST00000495515 SRSF3P84103 164 aaKnown RBP12.13□□□□□ -0.47
HDAC6-235ENST00000495515 DNLZQ5SXM8 178 aa12.13□□□□□ -0.47
HDAC6-235ENST00000495515 RASL10AQ92737 203 aa12.13□□□□□ -0.47
HDAC6-235ENST00000495515 C9orf85Q96MD7 179 aa12.13□□□□□ -0.47
HDAC6-235ENST00000495515 IL36BQ9NZH7 164 aa12.13□□□□□ -0.47
HDAC6-235ENST00000495515 KMT2CQ8NEZ4 4911 aaKnown RBP12.12□□□□□ -0.47
HDAC6-235ENST00000495515 XKRY2A2RUG3 117 aa12.12□□□□□ -0.47
HDAC6-235ENST00000495515 GRIFINA4D1Z8 144 aa12.12□□□□□ -0.47
HDAC6-235ENST00000495515 SOHLH1Q5JUK2 328 aa12.12□□□□□ -0.47
HDAC6-235ENST00000495515 NDUFAF3Q9BU61 184 aa12.12□□□□□ -0.47
HDAC6-235ENST00000495515 C19orf71A6NCJ1 209 aa12.11□□□□□ -0.47
HDAC6-235ENST00000495515 C9JQL5 133 aa12.11□□□□□ -0.47
HDAC6-235ENST00000495515 F5H768 121 aa12.11□□□□□ -0.47
HDAC6-235ENST00000495515 RNASE3P12724 160 aaKnown RBP12.11□□□□□ -0.47
HDAC6-235ENST00000495515 TCTAP57738 103 aa12.11□□□□□ -0.47
HDAC6-235ENST00000495515 PTH2Q96A98 100 aa12.11□□□□□ -0.47
HDAC6-235ENST00000495515 FAM210BQ96KR6 192 aa12.11□□□□□ -0.47
HDAC6-235ENST00000495515 H3BVH4 76 aa12.1□□□□□ -0.47
HDAC6-235ENST00000495515 ARMS2P0C7Q2 107 aa12.1□□□□□ -0.47
HDAC6-235ENST00000495515 MED14OSP0DP75 135 aa12.1□□□□□ -0.47
HDAC6-235ENST00000495515 RPL19P84098 196 aaKnown RBP12.1□□□□□ -0.47
HDAC6-235ENST00000495515 TMEM241Q24JQ0 296 aa12.1□□□□□ -0.47
HDAC6-235ENST00000495515 ZNF876PQ49A33 203 aa12.1□□□□□ -0.47
HDAC6-235ENST00000495515 SYT8Q8NBV8 401 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms