RNA–Protein interactions for RNA: ENST00000495010.5

VARS-228, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-228ENST00000495010 SDF2L1Q9HCN8 221 aa9.47□□□□□ -0.89
VARS-228ENST00000495010 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.46□□□□□ -0.9
VARS-228ENST00000495010 TRAV6A0A075B6T7 132 aa9.46□□□□□ -0.9
VARS-228ENST00000495010 TRAV21A0A0B4J279 112 aa9.46□□□□□ -0.9
VARS-228ENST00000495010 DIRC3C9JPN6 131 aa9.46□□□□□ -0.9
VARS-228ENST00000495010 UBE2L3P68036 154 aaKnown RBP9.46□□□□□ -0.9
VARS-228ENST00000495010 RHOHQ15669 191 aa9.46□□□□□ -0.9
VARS-228ENST00000495010 Q6ZSA8 131 aa9.46□□□□□ -0.9
VARS-228ENST00000495010 SLC25A29Q8N8R3 303 aa9.46□□□□□ -0.9
VARS-228ENST00000495010 HYLS1Q96M11 299 aa9.46□□□□□ -0.9
VARS-228ENST00000495010 RPH3ALQ9UNE2 315 aa9.46□□□□□ -0.9
VARS-228ENST00000495010 TRAV8-3A0A0A6YYJ7 113 aa9.45□□□□□ -0.9
VARS-228ENST00000495010 C17orf112F2Z3M2 114 aa9.45□□□□□ -0.9
VARS-228ENST00000495010 LECT2O14960 151 aa9.45□□□□□ -0.9
VARS-228ENST00000495010 CIDEAO60543 219 aa9.45□□□□□ -0.9
VARS-228ENST00000495010 TCRBP04435 133 aa9.45□□□□□ -0.9
VARS-228ENST00000495010 IL7P13232 177 aa9.45□□□□□ -0.9
VARS-228ENST00000495010 OR5C1Q8NGR4 320 aa9.45□□□□□ -0.9
VARS-228ENST00000495010 CMTM2Q8TAZ6 248 aa9.45□□□□□ -0.9
VARS-228ENST00000495010 TMED6Q8WW62 240 aa9.45□□□□□ -0.9
VARS-228ENST00000495010 KCNS1Q96KK3 526 aa9.45□□□□□ -0.9
VARS-228ENST00000495010 SH3BGRL3Q9H299 93 aa9.45□□□□□ -0.9
VARS-228ENST00000495010 TRBV6-4A0A1B0GX49 114 aa9.44□□□□□ -0.9
VARS-228ENST00000495010 LYRM1O43325 122 aa9.44□□□□□ -0.9
VARS-228ENST00000495010 TYMSP04818 313 aa9.44□□□□□ -0.9
VARS-228ENST00000495010 NHLH2Q02577 135 aa9.44□□□□□ -0.9
VARS-228ENST00000495010 WFDC2Q14508 124 aa9.44□□□□□ -0.9
VARS-228ENST00000495010 TOR2AQ5JU69 321 aa9.44□□□□□ -0.9
VARS-228ENST00000495010 FAM74A1Q5RGS3 127 aa9.44□□□□□ -0.9
VARS-228ENST00000495010 ATP6V0E2Q8NHE4 81 aa9.44□□□□□ -0.9
VARS-228ENST00000495010 SDHCQ99643 169 aaPredicted RBP9.44□□□□□ -0.9
VARS-228ENST00000495010 NMES1Q9C002 83 aa9.44□□□□□ -0.9
VARS-228ENST00000495010 GTSF1LQ9H1H1 148 aa9.44□□□□□ -0.9
VARS-228ENST00000495010 PLA2G2DQ9UNK4 145 aa9.44□□□□□ -0.9
VARS-228ENST00000495010 IGHV3-73A0A0B4J1V6 119 aa9.43□□□□□ -0.9
VARS-228ENST00000495010 OXTP01178 125 aa9.43□□□□□ -0.9
VARS-228ENST00000495010 TAS2R45P59539 299 aa9.43□□□□□ -0.9
VARS-228ENST00000495010 ZNF876PQ49A33 203 aa9.43□□□□□ -0.9
VARS-228ENST00000495010 KHDC3LQ587J8 217 aa9.43□□□□□ -0.9
VARS-228ENST00000495010 ASB13Q8WXK3 278 aa9.43□□□□□ -0.9
VARS-228ENST00000495010 NUDT15Q9NV35 164 aa9.43□□□□□ -0.9
VARS-228ENST00000495010 PGPA6NDG6 321 aa9.42□□□□□ -0.9
VARS-228ENST00000495010 RBFOX3A6NFN3 312 aa9.42□□□□□ -0.9
VARS-228ENST00000495010 F6UZH7 168 aa9.42□□□□□ -0.9
VARS-228ENST00000495010 IL15RAQ13261 267 aa9.42□□□□□ -0.9
VARS-228ENST00000495010 CFAP126Q5VTH2 177 aa9.42□□□□□ -0.9
VARS-228ENST00000495010 SCXQ7RTU7 201 aa9.42□□□□□ -0.9
VARS-228ENST00000495010 WDR61Q9GZS3 305 aaKnown RBP9.42□□□□□ -0.9
VARS-228ENST00000495010 TREM1Q9NP99 234 aa9.42□□□□□ -0.9
VARS-228ENST00000495010 OTORQ9NRC9 128 aa9.42□□□□□ -0.9
VARS-228ENST00000495010 COX11Q9Y6N1 276 aa9.42□□□□□ -0.9
VARS-228ENST00000495010 GGTLC3B5MD39 225 aa9.41□□□□□ -0.9
VARS-228ENST00000495010 PLA2G10O15496 165 aa9.41□□□□□ -0.9
VARS-228ENST00000495010 RS1O15537 224 aa9.41□□□□□ -0.9
VARS-228ENST00000495010 MGST1P10620 155 aaKnown RBP9.41□□□□□ -0.9
VARS-228ENST00000495010 ASAH1Q13510 395 aa9.41□□□□□ -0.9
VARS-228ENST00000495010 GOLT1AQ6ZVE7 132 aa9.41□□□□□ -0.9
VARS-228ENST00000495010 BAALCQ8WXS3 180 aa9.41□□□□□ -0.9
VARS-228ENST00000495010 RMI2Q96E14 147 aa9.41□□□□□ -0.9
VARS-228ENST00000495010 H2AFB2P0C5Z0 115 aa9.4□□□□□ -0.9
VARS-228ENST00000495010 LINC01620Q4KN68 170 aa9.4□□□□□ -0.9
VARS-228ENST00000495010 FFAR4Q5NUL3 377 aa9.4□□□□□ -0.9
VARS-228ENST00000495010 Q8N976 141 aa9.4□□□□□ -0.9
VARS-228ENST00000495010 NDFIP1Q9BT67 221 aa9.4□□□□□ -0.9
VARS-228ENST00000495010 MBD2Q9UBB5 411 aa9.4□□□□□ -0.9
VARS-228ENST00000495010 ACOT6Q3I5F7 207 aaPredicted RBP9.39□□□□□ -0.91
VARS-228ENST00000495010 CHAC1Q9BUX1 264 aa9.39□□□□□ -0.91
VARS-228ENST00000495010 LRRC37A5PQ49AS3 106 aa9.38□□□□□ -0.91
VARS-228ENST00000495010 DPPA3Q6W0C5 159 aa9.38□□□□□ -0.91
VARS-228ENST00000495010 DAZ4Q86SG3 579 aaKnown RBP9.38□□□□□ -0.91
VARS-228ENST00000495010 Q8N3U1 123 aa9.38□□□□□ -0.91
VARS-228ENST00000495010 DAZ3Q9NR90 486 aaKnown RBP9.38□□□□□ -0.91
VARS-228ENST00000495010 URGCP-MRPS24S4R325 110 aa9.38□□□□□ -0.91
VARS-228ENST00000495010 TRAV8-1A0A0A6YYK1 113 aa9.37□□□□□ -0.91
VARS-228ENST00000495010 GAGE12JA6NER3 117 aa9.37□□□□□ -0.91
VARS-228ENST00000495010 SEC11BP0C7V7 166 aa9.37□□□□□ -0.91
VARS-228ENST00000495010 GAGE1Q13065 139 aa9.37□□□□□ -0.91
VARS-228ENST00000495010 GAGE4Q13068 117 aa9.37□□□□□ -0.91
VARS-228ENST00000495010 GAGE5Q13069 117 aa9.37□□□□□ -0.91
VARS-228ENST00000495010 GAGE13Q4V321 117 aa9.37□□□□□ -0.91
VARS-228ENST00000495010 ARL6IP6Q8N6S5 226 aa9.37□□□□□ -0.91
VARS-228ENST00000495010 SCGB1C1Q8TD33 95 aa9.37□□□□□ -0.91
VARS-228ENST00000495010 TVP23CQ96ET8 276 aa9.37□□□□□ -0.91
VARS-228ENST00000495010 RBM38Q9H0Z9 239 aaKnown RBP9.37□□□□□ -0.91
VARS-228ENST00000495010 IGKV2D-24A0A075B6R9 120 aa9.36□□□□□ -0.91
VARS-228ENST00000495010 A0A087WWC5 75 aa9.36□□□□□ -0.91
VARS-228ENST00000495010 FAM240BA0A1B0GVZ2 78 aa9.36□□□□□ -0.91
VARS-228ENST00000495010 TAAR5O14804 337 aa9.36□□□□□ -0.91
VARS-228ENST00000495010 ZNF506Q5JVG8 444 aa9.36□□□□□ -0.91
VARS-228ENST00000495010 CIRBP-AS1Q8TBR5 109 aa9.36□□□□□ -0.91
VARS-228ENST00000495010 OR5AC2Q9NZP5 309 aa9.36□□□□□ -0.91
VARS-228ENST00000495010 DNAH8Q96JB1 4490 aa9.36□□□□□ -0.91
VARS-228ENST00000495010 A0A1W2PPV4 95 aa9.35□□□□□ -0.91
VARS-228ENST00000495010 PGPEP1LA6NFU8 196 aa9.35□□□□□ -0.91
VARS-228ENST00000495010 SIX6O95475 246 aa9.35□□□□□ -0.91
VARS-228ENST00000495010 GNG5P63218 68 aa9.35□□□□□ -0.91
VARS-228ENST00000495010 ZFP69Q49AA0 526 aa9.35□□□□□ -0.91
VARS-228ENST00000495010 PTH2Q96A98 100 aa9.35□□□□□ -0.91
VARS-228ENST00000495010 SGK494Q96LW2 274 aa9.35□□□□□ -0.91
VARS-228ENST00000495010 C9orf85Q96MD7 179 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 111.3 ms