RNA–Protein interactions for RNA: ENST00000494654.1

MDC1-208, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-208ENST00000494654 CXCL13O43927 109 aa2.11□□□□□ -2.07
MDC1-208ENST00000494654 SH2D1AO60880 128 aa2.11□□□□□ -2.07
MDC1-208ENST00000494654 TNFRSF6BO95407 300 aa2.11□□□□□ -2.07
MDC1-208ENST00000494654 IGLV3-19P01714 112 aa2.11□□□□□ -2.07
MDC1-208ENST00000494654 IGHV3-30P01768 117 aa2.11□□□□□ -2.07
MDC1-208ENST00000494654 IGHV3-33P01772 117 aa2.11□□□□□ -2.07
MDC1-208ENST00000494654 IGHV4-34P06331 123 aa2.11□□□□□ -2.07
MDC1-208ENST00000494654 SAA1P0DJI8 122 aaPredicted RBP2.11□□□□□ -2.07
MDC1-208ENST00000494654 IGHV3-30-5P0DP03 117 aa2.11□□□□□ -2.07
MDC1-208ENST00000494654 CCL3P10147 92 aa2.11□□□□□ -2.07
MDC1-208ENST00000494654 CNTFRP26992 372 aa2.11□□□□□ -2.07
MDC1-208ENST00000494654 EFNA4P52798 201 aa2.11□□□□□ -2.07
MDC1-208ENST00000494654 EMP1P54849 157 aa2.11□□□□□ -2.07
MDC1-208ENST00000494654 SLURP1P55000 103 aa2.11□□□□□ -2.07
MDC1-208ENST00000494654 LOXL3P58215 753 aa2.11□□□□□ -2.07
MDC1-208ENST00000494654 FXYD7P58549 80 aa2.11□□□□□ -2.07
MDC1-208ENST00000494654 HIST1H4AP62805 103 aaKnown RBP2.11□□□□□ -2.07
MDC1-208ENST00000494654 ERHP84090 104 aaKnown RBP2.11□□□□□ -2.07
MDC1-208ENST00000494654 PDE6HQ13956 83 aa2.11□□□□□ -2.07
MDC1-208ENST00000494654 PCOLCEQ15113 449 aa2.11□□□□□ -2.07
MDC1-208ENST00000494654 PMVKQ15126 192 aa2.11□□□□□ -2.07
MDC1-208ENST00000494654 ANXA2RQ3ZCQ2 193 aa2.11□□□□□ -2.07
MDC1-208ENST00000494654 TMEM155Q4W5P6 130 aa2.11□□□□□ -2.07
MDC1-208ENST00000494654 ORMDL2Q53FV1 153 aa2.11□□□□□ -2.07
MDC1-208ENST00000494654 PAPPA-AS1Q5QFB9 102 aa2.11□□□□□ -2.07
MDC1-208ENST00000494654 FAM53AQ6NSI3 398 aaPredicted RBP2.11□□□□□ -2.07
MDC1-208ENST00000494654 LYZL1Q6UWQ5 148 aa2.11□□□□□ -2.07
MDC1-208ENST00000494654 SIGLEC15Q6ZMC9 328 aa2.11□□□□□ -2.07
MDC1-208ENST00000494654 ZFP2Q6ZN57 461 aa2.11□□□□□ -2.07
MDC1-208ENST00000494654 GOLT1AQ6ZVE7 132 aa2.11□□□□□ -2.07
MDC1-208ENST00000494654 TRPT1Q86TN4 253 aaKnown RBP2.11□□□□□ -2.07
MDC1-208ENST00000494654 PLXDC1Q8IUK5 500 aa2.11□□□□□ -2.07
MDC1-208ENST00000494654 VKORC1L1Q8N0U8 176 aa2.11□□□□□ -2.07
MDC1-208ENST00000494654 DEFB119Q8N690 84 aa2.11□□□□□ -2.07
MDC1-208ENST00000494654 C1orf162Q8NEQ5 155 aaPredicted RBP2.11□□□□□ -2.07
MDC1-208ENST00000494654 TMEM167AQ8TBQ9 72 aa2.11□□□□□ -2.07
MDC1-208ENST00000494654 PLEKHB2Q96CS7 222 aa2.11□□□□□ -2.07
MDC1-208ENST00000494654 FAM173AQ9BQD7 235 aa2.11□□□□□ -2.07
MDC1-208ENST00000494654 DEFB126Q9BYW3 111 aa2.11□□□□□ -2.07
MDC1-208ENST00000494654 AGPAT4-IT1Q9H0P7 198 aa2.11□□□□□ -2.07
MDC1-208ENST00000494654 EDA2RQ9HAV5 297 aa2.11□□□□□ -2.07
MDC1-208ENST00000494654 PROK2Q9HC23 129 aa2.11□□□□□ -2.07
MDC1-208ENST00000494654 NDUFA4L2Q9NRX3 87 aa2.11□□□□□ -2.07
MDC1-208ENST00000494654 TMEM160Q9NX00 188 aa2.11□□□□□ -2.07
MDC1-208ENST00000494654 GNG12Q9UBI6 72 aa2.11□□□□□ -2.07
MDC1-208ENST00000494654 PRO1854Q9UHT4 67 aa2.11□□□□□ -2.07
MDC1-208ENST00000494654 DMXL2Q8TDJ6 3036 aa2.11□□□□□ -2.07
MDC1-208ENST00000494654 ZGRF1Q86YA3 2104 aa2.11□□□□□ -2.07
MDC1-208ENST00000494654 DNAJC13O75165 2243 aa2.1□□□□□ -2.07
MDC1-208ENST00000494654 LAMA1P25391 3075 aa2.1□□□□□ -2.07
MDC1-208ENST00000494654 TRBV19A0A075B6N1 114 aa2.1□□□□□ -2.07
MDC1-208ENST00000494654 IGHV1OR21-1A0A087WYE8 117 aa2.1□□□□□ -2.07
MDC1-208ENST00000494654 TRAV17A0A0B4J275 112 aa2.1□□□□□ -2.07
MDC1-208ENST00000494654 IGHV1-69DA0A0B4J2H0 117 aa2.1□□□□□ -2.07
MDC1-208ENST00000494654 KRTAP4-8A0A0G2JLE6 195 aa2.1□□□□□ -2.07
MDC1-208ENST00000494654 A0A0G2JNJ9 132 aa2.1□□□□□ -2.07
MDC1-208ENST00000494654 TRBV30A0A0K0K1B3 111 aa2.1□□□□□ -2.07
MDC1-208ENST00000494654 DEFB108AA8MXU0 73 aa2.1□□□□□ -2.07
MDC1-208ENST00000494654 OOSP1A8MZH6 123 aa2.1□□□□□ -2.07
MDC1-208ENST00000494654 SRRM5B3KS81 715 aa2.1□□□□□ -2.07
MDC1-208ENST00000494654 NDUFC2-KCTD14E9PQ53 114 aa2.1□□□□□ -2.07
MDC1-208ENST00000494654 SMKR1H3BMG3 65 aa2.1□□□□□ -2.07
MDC1-208ENST00000494654 K7ENP7 123 aa2.1□□□□□ -2.07
MDC1-208ENST00000494654 M0R381 172 aa2.1□□□□□ -2.07
MDC1-208ENST00000494654 PLXNB1O43157 2135 aa2.1□□□□□ -2.07
MDC1-208ENST00000494654 MRPL33O75394 65 aaKnown RBP2.1□□□□□ -2.07
MDC1-208ENST00000494654 PLAUP00749 431 aa2.1□□□□□ -2.07
MDC1-208ENST00000494654 CFC1BP0CG36 223 aa2.1□□□□□ -2.07
MDC1-208ENST00000494654 CFC1P0CG37 223 aa2.1□□□□□ -2.07
MDC1-208ENST00000494654 CD59P13987 128 aa2.1□□□□□ -2.07
MDC1-208ENST00000494654 PLA2G2AP14555 144 aa2.1□□□□□ -2.07
MDC1-208ENST00000494654 LINC00205P59089 165 aa2.1□□□□□ -2.07
MDC1-208ENST00000494654 MRPS21P82921 87 aaKnown RBP2.1□□□□□ -2.07
MDC1-208ENST00000494654 MZT1Q08AG7 82 aa2.1□□□□□ -2.07
MDC1-208ENST00000494654 LAGE3Q14657 143 aa2.1□□□□□ -2.07
MDC1-208ENST00000494654 Q5XG85 94 aa2.1□□□□□ -2.07
MDC1-208ENST00000494654 SCGB1D4Q6XE38 83 aa2.1□□□□□ -2.07
MDC1-208ENST00000494654 SDIM1Q6ZPB5 146 aa2.1□□□□□ -2.07
MDC1-208ENST00000494654 ZNF833PQ6ZTB9 187 aa2.1□□□□□ -2.07
MDC1-208ENST00000494654 MDP1Q86V88 176 aa2.1□□□□□ -2.07
MDC1-208ENST00000494654 LINC00482Q8N8I6 264 aa2.1□□□□□ -2.07
MDC1-208ENST00000494654 NEXN-AS1Q8NBZ9 246 aa2.1□□□□□ -2.07
MDC1-208ENST00000494654 TMEM263Q8WUH6 116 aaKnown RBP2.1□□□□□ -2.07
MDC1-208ENST00000494654 TOMM6Q96B49 74 aa2.1□□□□□ -2.07
MDC1-208ENST00000494654 DUX3Q96PT4 197 aa2.1□□□□□ -2.07
MDC1-208ENST00000494654 METTL26Q96S19 204 aa2.1□□□□□ -2.07
MDC1-208ENST00000494654 CHCHD5Q9BSY4 110 aa2.1□□□□□ -2.07
MDC1-208ENST00000494654 SMIM2Q9BVW6 85 aa2.1□□□□□ -2.07
MDC1-208ENST00000494654 CXXC4Q9H2H0 198 aa2.1□□□□□ -2.07
MDC1-208ENST00000494654 Q9UFV3 132 aa2.1□□□□□ -2.07
MDC1-208ENST00000494654 LINC00527Q9UJ94 153 aa2.1□□□□□ -2.07
MDC1-208ENST00000494654 HELZ2Q9BYK8 2649 aaKnown RBP2.1□□□□□ -2.07
MDC1-208ENST00000494654 SDK2Q58EX2 2172 aa2.09□□□□□ -2.07
MDC1-208ENST00000494654 FREM2Q5SZK8 3169 aa2.09□□□□□ -2.07
MDC1-208ENST00000494654 SVILO95425 2214 aa2.09□□□□□ -2.07
MDC1-208ENST00000494654 PIEZO2Q9H5I5 2752 aa2.09□□□□□ -2.07
MDC1-208ENST00000494654 TRGV11A0A075B6L2 103 aa2.09□□□□□ -2.07
MDC1-208ENST00000494654 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa2.09□□□□□ -2.07
MDC1-208ENST00000494654 A0A0J9YX75 114 aa2.09□□□□□ -2.07
MDC1-208ENST00000494654 TEX49A0A1B0GTD5 131 aa2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms