RNA–Protein interactions for RNA: ENST00000494582.1

LINC00488-201, long intergenic non-protein coding RNA 488, humanhuman

TSL 1 (best) BASIC

Gene LINC00488, Length 2,520 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00488-201ENST00000494582 C10orf126Q8N4M7 172 aa7.78□□□□□ -1.16
LINC00488-201ENST00000494582 MGAQ8IWI9 3026 aa7.78□□□□□ -1.16
LINC00488-201ENST00000494582 ASIPP42127 132 aa7.78□□□□□ -1.16
LINC00488-201ENST00000494582 GFRALQ6UXV0 394 aa7.78□□□□□ -1.16
LINC00488-201ENST00000494582 C15orf53Q8NAA6 179 aa7.78□□□□□ -1.16
LINC00488-201ENST00000494582 IGHV7-4-1A0A0J9YVY3 117 aa7.77□□□□□ -1.17
LINC00488-201ENST00000494582 SCGB2A1O75556 95 aa7.77□□□□□ -1.17
LINC00488-201ENST00000494582 SRSF2Q01130 221 aaKnown RBP7.77□□□□□ -1.17
LINC00488-201ENST00000494582 TOMM6Q96B49 74 aa7.77□□□□□ -1.17
LINC00488-201ENST00000494582 SMIM2Q9BVW6 85 aa7.77□□□□□ -1.17
LINC00488-201ENST00000494582 F8W735 103 aaPredicted RBP7.77□□□□□ -1.17
LINC00488-201ENST00000494582 PMS2CLQ68D20 193 aa7.77□□□□□ -1.17
LINC00488-201ENST00000494582 CRYGDP07320 174 aa7.76□□□□□ -1.17
LINC00488-201ENST00000494582 LYRM7Q5U5X0 104 aa7.76□□□□□ -1.17
LINC00488-201ENST00000494582 Q6Q795 121 aa7.76□□□□□ -1.17
LINC00488-201ENST00000494582 RNF182Q8N6D2 247 aa7.76□□□□□ -1.17
LINC00488-201ENST00000494582 DEFB104AQ8WTQ1 72 aa7.76□□□□□ -1.17
LINC00488-201ENST00000494582 TMEM190Q8WZ59 177 aa7.76□□□□□ -1.17
LINC00488-201ENST00000494582 ADGRG4Q8IZF6 3080 aa7.76□□□□□ -1.17
LINC00488-201ENST00000494582 C11orf86A6NJI1 115 aa7.76□□□□□ -1.17
LINC00488-201ENST00000494582 RNF223E7ERA6 249 aa7.76□□□□□ -1.17
LINC00488-201ENST00000494582 IGHV3-23P01764 117 aa7.76□□□□□ -1.17
LINC00488-201ENST00000494582 MAFAQ8NHW3 353 aaPredicted RBP7.76□□□□□ -1.17
LINC00488-201ENST00000494582 RPL39LQ96EH5 51 aaKnown RBP7.76□□□□□ -1.17
LINC00488-201ENST00000494582 LINC01587Q99440 93 aa7.76□□□□□ -1.17
LINC00488-201ENST00000494582 CHCHD5Q9BSY4 110 aa7.76□□□□□ -1.17
LINC00488-201ENST00000494582 MDFICQ9P1T7 246 aa7.76□□□□□ -1.17
LINC00488-201ENST00000494582 PRO1854Q9UHT4 67 aa7.76□□□□□ -1.17
LINC00488-201ENST00000494582 H7C2G1 150 aa7.75□□□□□ -1.17
LINC00488-201ENST00000494582 M0QXV9 152 aa7.75□□□□□ -1.17
LINC00488-201ENST00000494582 LOXP28300 417 aaPredicted RBP7.75□□□□□ -1.17
LINC00488-201ENST00000494582 TMEM155Q4W5P6 130 aa7.75□□□□□ -1.17
LINC00488-201ENST00000494582 C14orf178Q8N769 122 aaPredicted RBP7.75□□□□□ -1.17
LINC00488-201ENST00000494582 C8orf31Q8N9H6 132 aa7.75□□□□□ -1.17
LINC00488-201ENST00000494582 YAE1D1Q9NRH1 226 aa7.75□□□□□ -1.17
LINC00488-201ENST00000494582 IGLV4-69A0A075B6H9 119 aa7.75□□□□□ -1.17
LINC00488-201ENST00000494582 IGHV1-8P0DP01 117 aa7.75□□□□□ -1.17
LINC00488-201ENST00000494582 SEM1Q6ZVN7 128 aa7.75□□□□□ -1.17
LINC00488-201ENST00000494582 MSRB2Q9Y3D2 182 aa7.75□□□□□ -1.17
LINC00488-201ENST00000494582 IGHV1-3A0A0C4DH29 117 aa7.74□□□□□ -1.17
LINC00488-201ENST00000494582 TSHBP01222 138 aa7.74□□□□□ -1.17
LINC00488-201ENST00000494582 ARL3P36405 182 aa7.74□□□□□ -1.17
LINC00488-201ENST00000494582 C2orf66Q6UXQ4 117 aa7.74□□□□□ -1.17
LINC00488-201ENST00000494582 FAM57AQ8TBR7 257 aa7.74□□□□□ -1.17
LINC00488-201ENST00000494582 AMELXQ99217 191 aa7.74□□□□□ -1.17
LINC00488-201ENST00000494582 PKDREJQ9NTG1 2253 aa7.74□□□□□ -1.17
LINC00488-201ENST00000494582 IGHV3-35A0A0C4DH35 117 aa7.74□□□□□ -1.17
LINC00488-201ENST00000494582 IGHV3-33P01772 117 aa7.74□□□□□ -1.17
LINC00488-201ENST00000494582 IGHG3P01860 377 aa7.74□□□□□ -1.17
LINC00488-201ENST00000494582 PRR30Q53SZ7 412 aaPredicted RBP7.74□□□□□ -1.17
LINC00488-201ENST00000494582 ZNF474Q6S9Z5 364 aaPredicted RBP7.74□□□□□ -1.17
LINC00488-201ENST00000494582 A4D1N5 150 aa7.73□□□□□ -1.17
LINC00488-201ENST00000494582 SLC25A29Q8N8R3 303 aa7.73□□□□□ -1.17
LINC00488-201ENST00000494582 SVEP1Q4LDE5 3571 aa7.73□□□□□ -1.17
LINC00488-201ENST00000494582 DMXL1Q9Y485 3027 aa7.73□□□□□ -1.17
LINC00488-201ENST00000494582 TRAV8-4A0A0B4J246 113 aa7.73□□□□□ -1.17
LINC00488-201ENST00000494582 LAMA5O15230 3695 aa7.73□□□□□ -1.17
LINC00488-201ENST00000494582 DUSP14O95147 198 aaKnown RBP7.73□□□□□ -1.17
LINC00488-201ENST00000494582 ATP5J2P56134 94 aa7.73□□□□□ -1.17
LINC00488-201ENST00000494582 TMEM263Q8WUH6 116 aaKnown RBP7.73□□□□□ -1.17
LINC00488-201ENST00000494582 C21orf62Q9NYP8 219 aa7.73□□□□□ -1.17
LINC00488-201ENST00000494582 IGHV4-39P01824 125 aa7.72□□□□□ -1.17
LINC00488-201ENST00000494582 FOXC1Q12948 553 aa7.72□□□□□ -1.17
LINC00488-201ENST00000494582 OR10J6PQ8NGY7 276 aa7.72□□□□□ -1.17
LINC00488-201ENST00000494582 FANCD2OSQ96PS1 177 aa7.72□□□□□ -1.17
LINC00488-201ENST00000494582 IGLV1-47P01700 117 aa7.72□□□□□ -1.17
LINC00488-201ENST00000494582 SUMO2P61956 95 aaKnown RBP7.72□□□□□ -1.17
LINC00488-201ENST00000494582 TCF15Q12870 199 aa7.72□□□□□ -1.17
LINC00488-201ENST00000494582 LINC01620Q4KN68 170 aa7.72□□□□□ -1.17
LINC00488-201ENST00000494582 AGPAT4-IT1Q9H0P7 198 aa7.72□□□□□ -1.17
LINC00488-201ENST00000494582 TIMM23O14925 209 aa7.71□□□□□ -1.18
LINC00488-201ENST00000494582 RPL7P18124 248 aaKnown RBP7.71□□□□□ -1.18
LINC00488-201ENST00000494582 ORMDL2Q53FV1 153 aa7.71□□□□□ -1.18
LINC00488-201ENST00000494582 SPANXN1Q5VSR9 72 aa7.71□□□□□ -1.18
LINC00488-201ENST00000494582 RP1L1Q8IWN7 2480 aaPredicted RBP7.71□□□□□ -1.18
LINC00488-201ENST00000494582 RELNP78509 3460 aa7.71□□□□□ -1.18
LINC00488-201ENST00000494582 TRAV2A0A0B4J234 112 aa7.71□□□□□ -1.18
LINC00488-201ENST00000494582 LGALS9O00182 355 aa7.71□□□□□ -1.18
LINC00488-201ENST00000494582 NDUFB3O43676 98 aa7.71□□□□□ -1.18
LINC00488-201ENST00000494582 RPL13AP40429 203 aaKnown RBP7.71□□□□□ -1.18
LINC00488-201ENST00000494582 CCL17Q92583 94 aa7.71□□□□□ -1.18
LINC00488-201ENST00000494582 TPRP12270 2363 aaKnown RBP7.7□□□□□ -1.18
LINC00488-201ENST00000494582 TMEM178BH3BS89 294 aa7.7□□□□□ -1.18
LINC00488-201ENST00000494582 CD59P13987 128 aa7.7□□□□□ -1.18
LINC00488-201ENST00000494582 PRR9Q5T870 116 aa7.7□□□□□ -1.18
LINC00488-201ENST00000494582 TIMD4Q96H15 378 aa7.7□□□□□ -1.18
LINC00488-201ENST00000494582 BEX4Q9NWD9 120 aaPredicted RBP7.7□□□□□ -1.18
LINC00488-201ENST00000494582 WNK2Q9Y3S1 2297 aa7.7□□□□□ -1.18
LINC00488-201ENST00000494582 IGHV4-4A0A075B6R2 117 aa7.7□□□□□ -1.18
LINC00488-201ENST00000494582 IGHV3-66A0A0C4DH42 116 aa7.7□□□□□ -1.18
LINC00488-201ENST00000494582 LOC107984640A0A0U1RRK4 108 aa7.7□□□□□ -1.18
LINC00488-201ENST00000494582 BUB1B-PAK6H3BSN5 160 aa7.7□□□□□ -1.18
LINC00488-201ENST00000494582 IGF1P05019 195 aa7.7□□□□□ -1.18
LINC00488-201ENST00000494582 LINC00694P0DN24 101 aa7.7□□□□□ -1.18
LINC00488-201ENST00000494582 COX7A1P24310 79 aa7.7□□□□□ -1.18
LINC00488-201ENST00000494582 ZNRF2Q8NHG8 242 aa7.7□□□□□ -1.18
LINC00488-201ENST00000494582 POLEQ07864 2286 aa7.69□□□□□ -1.18
LINC00488-201ENST00000494582 RAB1BQ9H0U4 201 aa7.69□□□□□ -1.18
LINC00488-201ENST00000494582 CSDC2Q9Y534 153 aaKnown RBP7.69□□□□□ -1.18
LINC00488-201ENST00000494582 IGLV11-55A0A075B6I3 123 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms