RNA–Protein interactions for RNA: ENST00000494446.1

FN1-225, Transcript of fibronectin 1, human

TSL 2

Gene FN1, Length 676 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FN1-225	ENST00000494446	SLC39A9	Q9NUM3	307 aa		4.55	□□□□□ -1.68
FN1-225	ENST00000494446	GNG13	Q9P2W3	67 aa		4.55	□□□□□ -1.68
FN1-225	ENST00000494446	SMCO3	A2RU48	225 aa		4.54	□□□□□ -1.68
FN1-225	ENST00000494446	ZNF98	A6NK75	572 aa		4.54	□□□□□ -1.68
FN1-225	ENST00000494446	ZFP92	A6NM28	416 aa		4.54	□□□□□ -1.68
FN1-225	ENST00000494446		A8MTW9	85 aa		4.54	□□□□□ -1.68
FN1-225	ENST00000494446		B4DEV8	164 aa		4.54	□□□□□ -1.68
FN1-225	ENST00000494446		H3BQ15	152 aa		4.54	□□□□□ -1.68
FN1-225	ENST00000494446	CORT	O00230	105 aa		4.54	□□□□□ -1.68
FN1-225	ENST00000494446	IGLV2-8	P01709	118 aa		4.54	□□□□□ -1.68
FN1-225	ENST00000494446	STAG3L2	P0CL84	134 aa		4.54	□□□□□ -1.68
FN1-225	ENST00000494446	STAG3L3	P0CL85	134 aa		4.54	□□□□□ -1.68
FN1-225	ENST00000494446	EVI2A	P22794	236 aa		4.54	□□□□□ -1.68
FN1-225	ENST00000494446	RPL29	P47914	159 aa	Known RBP	4.54	□□□□□ -1.68
FN1-225	ENST00000494446	SUB1	P53999	127 aa	Known RBP eCLIP	4.54	□□□□□ -1.68
FN1-225	ENST00000494446	FGF8	P55075	233 aa	Predicted RBP	4.54	□□□□□ -1.68
FN1-225	ENST00000494446	TAS2R60	P59551	318 aa		4.54	□□□□□ -1.68
FN1-225	ENST00000494446	MEF2B	Q02080	365 aa	Predicted RBP	4.54	□□□□□ -1.68
FN1-225	ENST00000494446	FAM122C	Q6P4D5	195 aa		4.54	□□□□□ -1.68
FN1-225	ENST00000494446	TEPP	Q6URK8	271 aa		4.54	□□□□□ -1.68
FN1-225	ENST00000494446	RAB24	Q969Q5	203 aa		4.54	□□□□□ -1.68
FN1-225	ENST00000494446	TVP23C	Q96ET8	276 aa		4.54	□□□□□ -1.68
FN1-225	ENST00000494446	C20orf173	Q96LM9	149 aa		4.54	□□□□□ -1.68
FN1-225	ENST00000494446	KRTAP4-11	Q9BYQ6	195 aa		4.54	□□□□□ -1.68
FN1-225	ENST00000494446	TMPRSS5	Q9H3S3	457 aa		4.54	□□□□□ -1.68
FN1-225	ENST00000494446	DNAJC4	Q9NNZ3	241 aa		4.54	□□□□□ -1.68
FN1-225	ENST00000494446	RPS10P5	Q9NQ39	176 aa		4.54	□□□□□ -1.68
FN1-225	ENST00000494446	PXMP4	Q9Y6I8	212 aa		4.54	□□□□□ -1.68
FN1-225	ENST00000494446		M0R036	132 aa		4.53	□□□□□ -1.68
FN1-225	ENST00000494446	ISLR	O14498	428 aa		4.53	□□□□□ -1.68
FN1-225	ENST00000494446	SOCS3	O14543	225 aa		4.53	□□□□□ -1.68
FN1-225	ENST00000494446	DUSP14	O95147	198 aa	Known RBP	4.53	□□□□□ -1.68
FN1-225	ENST00000494446	MT-ND4L	P03901	98 aa		4.53	□□□□□ -1.68
FN1-225	ENST00000494446	IGLC1	P0CG04	106 aa		4.53	□□□□□ -1.68
FN1-225	ENST00000494446	OR10J1	P30954	320 aa		4.53	□□□□□ -1.68
FN1-225	ENST00000494446	CNN1	P51911	297 aa	Known RBP	4.53	□□□□□ -1.68
FN1-225	ENST00000494446	RND2	P52198	227 aa		4.53	□□□□□ -1.68
FN1-225	ENST00000494446	YPEL3	P61236	119 aa	Predicted RBP	4.53	□□□□□ -1.68
FN1-225	ENST00000494446	RPL37A	P61513	92 aa	Known RBP	4.53	□□□□□ -1.68
FN1-225	ENST00000494446	LINC01620	Q4KN68	170 aa		4.53	□□□□□ -1.68
FN1-225	ENST00000494446	MIC13	Q5XKP0	118 aa		4.53	□□□□□ -1.68
FN1-225	ENST00000494446	ZNF493	Q6ZR52	646 aa		4.53	□□□□□ -1.68
FN1-225	ENST00000494446	CYP2G1P	Q6ZSU1	146 aa		4.53	□□□□□ -1.68
FN1-225	ENST00000494446	TMEM256	Q8N2U0	113 aa		4.53	□□□□□ -1.68
FN1-225	ENST00000494446	OR51G1	Q8NGK1	321 aa		4.53	□□□□□ -1.68
FN1-225	ENST00000494446	RNASEH2C	Q8TDP1	164 aa	Known RBP	4.53	□□□□□ -1.68
FN1-225	ENST00000494446	HIST1H2BA	Q96A08	127 aa		4.53	□□□□□ -1.68
FN1-225	ENST00000494446	DAZAP1	Q96EP5	407 aa	Known RBP	4.53	□□□□□ -1.68
FN1-225	ENST00000494446	C16orf92	Q96LL3	132 aa		4.53	□□□□□ -1.68
FN1-225	ENST00000494446	TXNDC17	Q9BRA2	123 aa		4.53	□□□□□ -1.68
FN1-225	ENST00000494446	LINC00467	Q9BRT7	94 aa		4.53	□□□□□ -1.68
FN1-225	ENST00000494446	SLC25A39	Q9BZJ4	359 aa	Predicted RBP	4.53	□□□□□ -1.68
FN1-225	ENST00000494446	SDF2L1	Q9HCN8	221 aa		4.53	□□□□□ -1.68
FN1-225	ENST00000494446	TMEM242	Q9NWH2	141 aa		4.53	□□□□□ -1.68
FN1-225	ENST00000494446	ICOS	Q9Y6W8	199 aa		4.53	□□□□□ -1.68
FN1-225	ENST00000494446	ARL2-SNX15	V9GYD0	113 aa		4.53	□□□□□ -1.68
FN1-225	ENST00000494446	IGKV1OR2-108	A0A075B7D4	117 aa		4.52	□□□□□ -1.69
FN1-225	ENST00000494446	CXorf1	O96002	111 aa		4.52	□□□□□ -1.69
FN1-225	ENST00000494446	CRYGD	P07320	174 aa		4.52	□□□□□ -1.69
FN1-225	ENST00000494446	LINC00869	P0C866	280 aa		4.52	□□□□□ -1.69
FN1-225	ENST00000494446	RD3L	P0DJH9	198 aa		4.52	□□□□□ -1.69
FN1-225	ENST00000494446	GPX4	P36969	197 aa	Predicted RBP	4.52	□□□□□ -1.69
FN1-225	ENST00000494446	AKR1C3	P42330	323 aa		4.52	□□□□□ -1.69
FN1-225	ENST00000494446	RAB31	Q13636	194 aa		4.52	□□□□□ -1.69
FN1-225	ENST00000494446	GCSAML	Q5JQS6	135 aa		4.52	□□□□□ -1.69
FN1-225	ENST00000494446	LELP1	Q5T871	98 aa		4.52	□□□□□ -1.69
FN1-225	ENST00000494446	LYPD5	Q6UWN5	251 aa		4.52	□□□□□ -1.69
FN1-225	ENST00000494446	WFDC10B	Q8IUB3	73 aa		4.52	□□□□□ -1.69
FN1-225	ENST00000494446	LINC00612	Q8N6U2	182 aa		4.52	□□□□□ -1.69
FN1-225	ENST00000494446	RNASE8	Q8TDE3	154 aa	Known RBP	4.52	□□□□□ -1.69
FN1-225	ENST00000494446	TMEM263	Q8WUH6	116 aa	Known RBP	4.52	□□□□□ -1.69
FN1-225	ENST00000494446	SLC35E1	Q96K37	410 aa		4.52	□□□□□ -1.69
FN1-225	ENST00000494446	CHAC1	Q9BUX1	264 aa		4.52	□□□□□ -1.69
FN1-225	ENST00000494446	PPP1R14D	Q9NXH3	145 aa		4.52	□□□□□ -1.69
FN1-225	ENST00000494446	NAT8	Q9UHE5	227 aa		4.52	□□□□□ -1.69
FN1-225	ENST00000494446	SLC45A2	Q9UMX9	530 aa		4.52	□□□□□ -1.69
FN1-225	ENST00000494446		A0A1W2PPV4	95 aa		4.51	□□□□□ -1.69
FN1-225	ENST00000494446	ZNF727	A8MUV8	499 aa		4.51	□□□□□ -1.69
FN1-225	ENST00000494446	SNURFL	B1AK76	121 aa		4.51	□□□□□ -1.69
FN1-225	ENST00000494446		F6UZH7	168 aa		4.51	□□□□□ -1.69
FN1-225	ENST00000494446		K7EP13	123 aa		4.51	□□□□□ -1.69
FN1-225	ENST00000494446	HMGB3	O15347	200 aa	Known RBP	4.51	□□□□□ -1.69
FN1-225	ENST00000494446	PDE6D	O43924	150 aa		4.51	□□□□□ -1.69
FN1-225	ENST00000494446	TOMM40	O96008	361 aa		4.51	□□□□□ -1.69
FN1-225	ENST00000494446	OR5G3	P0C626	314 aa		4.51	□□□□□ -1.69
FN1-225	ENST00000494446	ARL14EPL	P0DKL9	152 aa		4.51	□□□□□ -1.69
FN1-225	ENST00000494446	PSG1	P11464	419 aa		4.51	□□□□□ -1.69
FN1-225	ENST00000494446	RHOB	P62745	196 aa		4.51	□□□□□ -1.69
FN1-225	ENST00000494446	GAMT	Q14353	236 aa		4.51	□□□□□ -1.69
FN1-225	ENST00000494446	THAP8	Q8NA92	274 aa		4.51	□□□□□ -1.69
FN1-225	ENST00000494446	CIRBP-AS1	Q8TBR5	109 aa		4.51	□□□□□ -1.69
FN1-225	ENST00000494446	ISOC2	Q96AB3	205 aa		4.51	□□□□□ -1.69
FN1-225	ENST00000494446	MRPL32	Q9BYC8	188 aa	Known RBP	4.51	□□□□□ -1.69
FN1-225	ENST00000494446	CTDSP1	Q9GZU7	261 aa		4.51	□□□□□ -1.69
FN1-225	ENST00000494446	PARL	Q9H300	379 aa		4.51	□□□□□ -1.69
FN1-225	ENST00000494446		Q9HAA7	133 aa		4.51	□□□□□ -1.69
FN1-225	ENST00000494446	PRELID1	Q9Y255	219 aa		4.51	□□□□□ -1.69
FN1-225	ENST00000494446	IGLV2-33	A0A075B6J2	118 aa	Predicted RBP	4.5	□□□□□ -1.69
FN1-225	ENST00000494446	TRGV2	A0A075B6R0	118 aa		4.5	□□□□□ -1.69
FN1-225	ENST00000494446	PAGE4	O60829	102 aa		4.5	□□□□□ -1.69

Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms