RNA–Protein interactions for RNA: ENST00000494395.1

ITGB1-217, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-217ENST00000494395 TMEM75Q8N9X5 138 aa6.17□□□□□ -1.42
ITGB1-217ENST00000494395 FAM210BQ96KR6 192 aa6.17□□□□□ -1.42
ITGB1-217ENST00000494395 ATG101Q9BSB4 218 aa6.17□□□□□ -1.42
ITGB1-217ENST00000494395 GSN-AS1Q9NRJ2 163 aa6.17□□□□□ -1.42
ITGB1-217ENST00000494395 ARL2-SNX15V9GYD0 113 aa6.17□□□□□ -1.42
ITGB1-217ENST00000494395 KRTAP23-1A1A580 65 aa6.16□□□□□ -1.42
ITGB1-217ENST00000494395 CBY3A6NI87 242 aa6.16□□□□□ -1.42
ITGB1-217ENST00000494395 F6UZH7 168 aa6.16□□□□□ -1.42
ITGB1-217ENST00000494395 PFDN1O60925 122 aa6.16□□□□□ -1.42
ITGB1-217ENST00000494395 LY6G6CO95867 125 aa6.16□□□□□ -1.42
ITGB1-217ENST00000494395 DEFB130BP0DP73 79 aa6.16□□□□□ -1.42
ITGB1-217ENST00000494395 DEFB130AP0DP74 79 aa6.16□□□□□ -1.42
ITGB1-217ENST00000494395 HOXA5P20719 270 aa6.16□□□□□ -1.42
ITGB1-217ENST00000494395 UBE2G2P60604 165 aa6.16□□□□□ -1.42
ITGB1-217ENST00000494395 TDRG1Q3Y452 100 aa6.16□□□□□ -1.42
ITGB1-217ENST00000494395 IQCF2Q8IXL9 164 aa6.16□□□□□ -1.42
ITGB1-217ENST00000494395 C9orf62Q8N4C0 152 aa6.16□□□□□ -1.42
ITGB1-217ENST00000494395 ZNF680Q8NEM1 530 aa6.16□□□□□ -1.42
ITGB1-217ENST00000494395 FAM213BQ8TBF2 198 aa6.16□□□□□ -1.42
ITGB1-217ENST00000494395 SGK494Q96LW2 274 aa6.16□□□□□ -1.42
ITGB1-217ENST00000494395 C18orf15Q96N68 181 aa6.16□□□□□ -1.42
ITGB1-217ENST00000494395 C8orf49Q96NF6 230 aa6.16□□□□□ -1.42
ITGB1-217ENST00000494395 NKX6-2Q9C056 277 aaPredicted RBP6.16□□□□□ -1.42
ITGB1-217ENST00000494395 TREM1Q9NP99 234 aa6.16□□□□□ -1.42
ITGB1-217ENST00000494395 PSG8Q9UQ74 426 aa6.16□□□□□ -1.42
ITGB1-217ENST00000494395 KLF12Q9Y4X4 402 aa6.16□□□□□ -1.42
ITGB1-217ENST00000494395 MUC4Q99102 2169 aa6.16□□□□□ -1.42
ITGB1-217ENST00000494395 NACAE9PAV3 2078 aa6.15□□□□□ -1.42
ITGB1-217ENST00000494395 SNURFLB1AK76 121 aa6.15□□□□□ -1.42
ITGB1-217ENST00000494395 PEX7O00628 323 aa6.15□□□□□ -1.42
ITGB1-217ENST00000494395 SPINK4O60575 86 aa6.15□□□□□ -1.42
ITGB1-217ENST00000494395 ATP5G1P05496 136 aa6.15□□□□□ -1.42
ITGB1-217ENST00000494395 HTN3P15516 51 aa6.15□□□□□ -1.42
ITGB1-217ENST00000494395 BTF3P20290 206 aaKnown RBP6.15□□□□□ -1.42
ITGB1-217ENST00000494395 ATP5G3P48201 142 aa6.15□□□□□ -1.42
ITGB1-217ENST00000494395 ZNF80P51504 273 aaPredicted RBP6.15□□□□□ -1.42
ITGB1-217ENST00000494395 FLI1Q01543 452 aaPredicted RBP6.15□□□□□ -1.42
ITGB1-217ENST00000494395 MUC21Q5SSG8 566 aa6.15□□□□□ -1.42
ITGB1-217ENST00000494395 TMEM88Q6PEY1 159 aa6.15□□□□□ -1.42
ITGB1-217ENST00000494395 Q6ZTI0 123 aa6.15□□□□□ -1.42
ITGB1-217ENST00000494395 SLC51BQ86UW2 128 aa6.15□□□□□ -1.42
ITGB1-217ENST00000494395 LINC00479Q96M42 142 aa6.15□□□□□ -1.42
ITGB1-217ENST00000494395 NDUFAF3Q9BU61 184 aa6.15□□□□□ -1.42
ITGB1-217ENST00000494395 C11orf21Q9P2W6 132 aa6.15□□□□□ -1.42
ITGB1-217ENST00000494395 TRAV1-1A0A0B4J248 108 aa6.14□□□□□ -1.43
ITGB1-217ENST00000494395 TRAV34A0A0B4J273 112 aa6.14□□□□□ -1.43
ITGB1-217ENST00000494395 TRAV21A0A0B4J279 112 aa6.14□□□□□ -1.43
ITGB1-217ENST00000494395 GAGE12BA1L429 117 aa6.14□□□□□ -1.43
ITGB1-217ENST00000494395 FBLL1A6NHQ2 334 aaKnown RBP6.14□□□□□ -1.43
ITGB1-217ENST00000494395 K7EQM0 130 aa6.14□□□□□ -1.43
ITGB1-217ENST00000494395 PAGE4O60829 102 aa6.14□□□□□ -1.43
ITGB1-217ENST00000494395 GAGE7O76087 117 aa6.14□□□□□ -1.43
ITGB1-217ENST00000494395 GAGE12FP0CL80 117 aa6.14□□□□□ -1.43
ITGB1-217ENST00000494395 GAGE12GP0CL81 117 aa6.14□□□□□ -1.43
ITGB1-217ENST00000494395 GAGE12IP0CL82 117 aa6.14□□□□□ -1.43
ITGB1-217ENST00000494395 SULT1A2P50226 295 aa6.14□□□□□ -1.43
ITGB1-217ENST00000494395 COX8CQ7Z4L0 72 aa6.14□□□□□ -1.43
ITGB1-217ENST00000494395 Q86TA4 180 aa6.14□□□□□ -1.43
ITGB1-217ENST00000494395 SFT2D1Q8WV19 159 aa6.14□□□□□ -1.43
ITGB1-217ENST00000494395 HIST1H2BAQ96A08 127 aa6.14□□□□□ -1.43
ITGB1-217ENST00000494395 TCEAL7Q9BRU2 100 aa6.14□□□□□ -1.43
ITGB1-217ENST00000494395 MDFICQ9P1T7 246 aa6.14□□□□□ -1.43
ITGB1-217ENST00000494395 IGHV3-16A0A0C4DH30 117 aa6.13□□□□□ -1.43
ITGB1-217ENST00000494395 TRBV6-1A0A0K0K1D8 114 aa6.13□□□□□ -1.43
ITGB1-217ENST00000494395 IFNA7P01567 189 aa6.13□□□□□ -1.43
ITGB1-217ENST00000494395 RAB5CP51148 216 aa6.13□□□□□ -1.43
ITGB1-217ENST00000494395 CCL20P78556 96 aa6.13□□□□□ -1.43
ITGB1-217ENST00000494395 ZNF415Q09FC8 603 aa6.13□□□□□ -1.43
ITGB1-217ENST00000494395 TMEM183BQ1AE95 376 aa6.13□□□□□ -1.43
ITGB1-217ENST00000494395 LGALS9BQ3B8N2 356 aa6.13□□□□□ -1.43
ITGB1-217ENST00000494395 FAM159AQ6UWV7 190 aa6.13□□□□□ -1.43
ITGB1-217ENST00000494395 PRNTQ86SH4 94 aa6.13□□□□□ -1.43
ITGB1-217ENST00000494395 TMEM183AQ8IXX5 376 aa6.13□□□□□ -1.43
ITGB1-217ENST00000494395 C15orf53Q8NAA6 179 aa6.13□□□□□ -1.43
ITGB1-217ENST00000494395 NDFIP1Q9BT67 221 aa6.13□□□□□ -1.43
ITGB1-217ENST00000494395 TRGV11A0A075B6L2 103 aa6.12□□□□□ -1.43
ITGB1-217ENST00000494395 TRGV1A0A0A0MS02 117 aa6.12□□□□□ -1.43
ITGB1-217ENST00000494395 A0A1B0GV50 99 aa6.12□□□□□ -1.43
ITGB1-217ENST00000494395 F5H768 121 aa6.12□□□□□ -1.43
ITGB1-217ENST00000494395 GNRH2O43555 120 aa6.12□□□□□ -1.43
ITGB1-217ENST00000494395 GCGP01275 180 aa6.12□□□□□ -1.43
ITGB1-217ENST00000494395 TYMSP04818 313 aa6.12□□□□□ -1.43
ITGB1-217ENST00000494395 PFN1P07737 140 aaKnown RBP6.12□□□□□ -1.43
ITGB1-217ENST00000494395 ZFP69Q49AA0 526 aa6.12□□□□□ -1.43
ITGB1-217ENST00000494395 SMUG1Q53HV7 270 aa6.12□□□□□ -1.43
ITGB1-217ENST00000494395 SAPCD1Q5SSQ6 148 aa6.12□□□□□ -1.43
ITGB1-217ENST00000494395 EIF5AL1Q6IS14 154 aaKnown RBP6.12□□□□□ -1.43
ITGB1-217ENST00000494395 MRPL16Q9NX20 251 aaKnown RBP6.12□□□□□ -1.43
ITGB1-217ENST00000494395 LTAP01374 205 aa6.11□□□□□ -1.43
ITGB1-217ENST00000494395 P0DMU3 169 aa6.11□□□□□ -1.43
ITGB1-217ENST00000494395 FAM231AP0DMU4 169 aa6.11□□□□□ -1.43
ITGB1-217ENST00000494395 FAM231CP0DMU5 169 aa6.11□□□□□ -1.43
ITGB1-217ENST00000494395 CRIP1P50238 77 aa6.11□□□□□ -1.43
ITGB1-217ENST00000494395 PPT1P50897 306 aa6.11□□□□□ -1.43
ITGB1-217ENST00000494395 CST9LP1Q5W188 147 aa6.11□□□□□ -1.43
ITGB1-217ENST00000494395 ZNF575Q86XF7 245 aa6.11□□□□□ -1.43
ITGB1-217ENST00000494395 POM121L12Q8N7R1 296 aa6.11□□□□□ -1.43
ITGB1-217ENST00000494395 RASL10AQ92737 203 aa6.11□□□□□ -1.43
ITGB1-217ENST00000494395 FMC1Q96HJ9 113 aa6.11□□□□□ -1.43
ITGB1-217ENST00000494395 KCNS1Q96KK3 526 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms