RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 IFNA1P01562 189 aa9.57□□□□□ -0.88
COL1A1-208ENST00000494334 TYMSP04818 313 aa9.57□□□□□ -0.88
COL1A1-208ENST00000494334 S100A9P06702 114 aaKnown RBP9.57□□□□□ -0.88
COL1A1-208ENST00000494334 GAGE12FP0CL80 117 aa9.57□□□□□ -0.88
COL1A1-208ENST00000494334 GAGE12GP0CL81 117 aa9.57□□□□□ -0.88
COL1A1-208ENST00000494334 GAGE12IP0CL82 117 aa9.57□□□□□ -0.88
COL1A1-208ENST00000494334 BCL2P10415 239 aa9.57□□□□□ -0.88
COL1A1-208ENST00000494334 CRIP1P50238 77 aa9.57□□□□□ -0.88
COL1A1-208ENST00000494334 ZNF415Q09FC8 603 aa9.57□□□□□ -0.88
COL1A1-208ENST00000494334 LYPD6BQ8NI32 183 aa9.57□□□□□ -0.88
COL1A1-208ENST00000494334 ZC2HC1AQ96GY0 325 aa9.57□□□□□ -0.88
COL1A1-208ENST00000494334 KCNS1Q96KK3 526 aa9.57□□□□□ -0.88
COL1A1-208ENST00000494334 APLNQ9ULZ1 77 aa9.57□□□□□ -0.88
COL1A1-208ENST00000494334 IGHV4-4A0A075B6R2 117 aa9.56□□□□□ -0.88
COL1A1-208ENST00000494334 LCE6AA0A183 80 aa9.56□□□□□ -0.88
COL1A1-208ENST00000494334 FABP5P3A8MUU1 101 aa9.56□□□□□ -0.88
COL1A1-208ENST00000494334 ATP5G1P05496 136 aa9.56□□□□□ -0.88
COL1A1-208ENST00000494334 TCTAP57738 103 aa9.56□□□□□ -0.88
COL1A1-208ENST00000494334 MEF2BQ02080 365 aaPredicted RBP9.56□□□□□ -0.88
COL1A1-208ENST00000494334 C11orf52Q96A22 123 aa9.56□□□□□ -0.88
COL1A1-208ENST00000494334 SDF2L1Q9HCN8 221 aa9.56□□□□□ -0.88
COL1A1-208ENST00000494334 TRGV1A0A0A0MS02 117 aa9.55□□□□□ -0.88
COL1A1-208ENST00000494334 IGKV3D-20A0A0C4DH25 116 aa9.55□□□□□ -0.88
COL1A1-208ENST00000494334 IGHV3-16A0A0C4DH30 117 aa9.55□□□□□ -0.88
COL1A1-208ENST00000494334 LGALS9BQ3B8N2 356 aa9.55□□□□□ -0.88
COL1A1-208ENST00000494334 BAGE2Q86Y30 109 aa9.55□□□□□ -0.88
COL1A1-208ENST00000494334 NHLRC2Q8NBF2 726 aa9.55□□□□□ -0.88
COL1A1-208ENST00000494334 VAX2Q9UIW0 290 aa9.55□□□□□ -0.88
COL1A1-208ENST00000494334 RYR3Q15413 4870 aa9.54□□□□□ -0.88
COL1A1-208ENST00000494334 F5H768 121 aa9.54□□□□□ -0.88
COL1A1-208ENST00000494334 PDE6DO43924 150 aa9.54□□□□□ -0.88
COL1A1-208ENST00000494334 TAGLN2P37802 199 aaKnown RBP9.54□□□□□ -0.88
COL1A1-208ENST00000494334 RPL35P42766 123 aaKnown RBP9.54□□□□□ -0.88
COL1A1-208ENST00000494334 ZNF674Q2M3X9 581 aa9.54□□□□□ -0.88
COL1A1-208ENST00000494334 TEX261Q6UWH6 196 aa9.54□□□□□ -0.88
COL1A1-208ENST00000494334 FAM210BQ96KR6 192 aa9.54□□□□□ -0.88
COL1A1-208ENST00000494334 C18orf15Q96N68 181 aa9.54□□□□□ -0.88
COL1A1-208ENST00000494334 SPXQ9BT56 116 aa9.54□□□□□ -0.88
COL1A1-208ENST00000494334 DERL1Q9BUN8 251 aa9.54□□□□□ -0.88
COL1A1-208ENST00000494334 MLST8Q9BVC4 326 aa9.54□□□□□ -0.88
COL1A1-208ENST00000494334 MRPL16Q9NX20 251 aaKnown RBP9.54□□□□□ -0.88
COL1A1-208ENST00000494334 TRGV2A0A075B6R0 118 aa9.53□□□□□ -0.88
COL1A1-208ENST00000494334 SH2D1AO60880 128 aa9.53□□□□□ -0.88
COL1A1-208ENST00000494334 FAM162BQ5T6X4 162 aa9.53□□□□□ -0.88
COL1A1-208ENST00000494334 TMEM88Q6PEY1 159 aa9.53□□□□□ -0.88
COL1A1-208ENST00000494334 LINC00476Q8WZB0 136 aa9.53□□□□□ -0.88
COL1A1-208ENST00000494334 NDUFAF3Q9BU61 184 aa9.53□□□□□ -0.88
COL1A1-208ENST00000494334 MED9Q9NWA0 146 aa9.53□□□□□ -0.88
COL1A1-208ENST00000494334 TENM2Q9NT68 2774 aa9.52□□□□□ -0.88
COL1A1-208ENST00000494334 LYSTQ99698 3801 aa9.52□□□□□ -0.88
COL1A1-208ENST00000494334 RBFOX3A6NFN3 312 aa9.52□□□□□ -0.89
COL1A1-208ENST00000494334 ORM1P02763 201 aa9.52□□□□□ -0.89
COL1A1-208ENST00000494334 HOXA5P20719 270 aa9.52□□□□□ -0.89
COL1A1-208ENST00000494334 RASL10AQ92737 203 aa9.52□□□□□ -0.89
COL1A1-208ENST00000494334 HYDINQ4G0P3 5121 aa9.52□□□□□ -0.89
COL1A1-208ENST00000494334 RYR2Q92736 4967 aa9.52□□□□□ -0.89
COL1A1-208ENST00000494334 DNAH1Q9P2D7 4330 aa9.51□□□□□ -0.89
COL1A1-208ENST00000494334 RAB19A4D1S5 217 aa9.51□□□□□ -0.89
COL1A1-208ENST00000494334 M0R2P5 195 aa9.51□□□□□ -0.89
COL1A1-208ENST00000494334 LY6G6CO95867 125 aa9.51□□□□□ -0.89
COL1A1-208ENST00000494334 RNASE3P12724 160 aaKnown RBP9.51□□□□□ -0.89
COL1A1-208ENST00000494334 OR5I1Q13606 314 aa9.51□□□□□ -0.89
COL1A1-208ENST00000494334 ZNF506Q5JVG8 444 aa9.51□□□□□ -0.89
COL1A1-208ENST00000494334 ZNF575Q86XF7 245 aa9.51□□□□□ -0.89
COL1A1-208ENST00000494334 PCNPQ8WW12 178 aaKnown RBP9.51□□□□□ -0.89
COL1A1-208ENST00000494334 C9orf85Q96MD7 179 aa9.51□□□□□ -0.89
COL1A1-208ENST00000494334 ALMS1Q8TCU4 4167 aa9.5□□□□□ -0.89
COL1A1-208ENST00000494334 B4DEV8 164 aa9.5□□□□□ -0.89
COL1A1-208ENST00000494334 KRBOX1C9JBD0 128 aa9.5□□□□□ -0.89
COL1A1-208ENST00000494334 M0R036 132 aa9.5□□□□□ -0.89
COL1A1-208ENST00000494334 IGLV2-8P01709 118 aa9.5□□□□□ -0.89
COL1A1-208ENST00000494334 LINC01559Q495D7 138 aa9.5□□□□□ -0.89
COL1A1-208ENST00000494334 CENPWQ5EE01 88 aa9.5□□□□□ -0.89
COL1A1-208ENST00000494334 LGALS9CQ6DKI2 356 aa9.5□□□□□ -0.89
COL1A1-208ENST00000494334 IGHV3-53P01767 116 aa9.49□□□□□ -0.89
COL1A1-208ENST00000494334 S100A4P26447 101 aaKnown RBP9.49□□□□□ -0.89
COL1A1-208ENST00000494334 TOR2AQ5JU69 321 aa9.49□□□□□ -0.89
COL1A1-208ENST00000494334 PRR27Q6MZM9 219 aa9.49□□□□□ -0.89
COL1A1-208ENST00000494334 POM121L12Q8N7R1 296 aa9.49□□□□□ -0.89
COL1A1-208ENST00000494334 FAM210AQ96ND0 272 aa9.49□□□□□ -0.89
COL1A1-208ENST00000494334 TRBV20OR9-2A0A075B6H5 130 aa9.48□□□□□ -0.89
COL1A1-208ENST00000494334 TRAV26-1A0A087WT03 109 aa9.48□□□□□ -0.89
COL1A1-208ENST00000494334 TMSB15BA0A087X1C1 80 aa9.48□□□□□ -0.89
COL1A1-208ENST00000494334 GRIFINA4D1Z8 144 aa9.48□□□□□ -0.89
COL1A1-208ENST00000494334 C9JCJ5 164 aa9.48□□□□□ -0.89
COL1A1-208ENST00000494334 ASIPP42127 132 aa9.48□□□□□ -0.89
COL1A1-208ENST00000494334 GNG4P50150 75 aa9.48□□□□□ -0.89
COL1A1-208ENST00000494334 ZNF876PQ49A33 203 aa9.48□□□□□ -0.89
COL1A1-208ENST00000494334 DNLZQ5SXM8 178 aa9.48□□□□□ -0.89
COL1A1-208ENST00000494334 C15orf53Q8NAA6 179 aa9.48□□□□□ -0.89
COL1A1-208ENST00000494334 SMIM12Q96EX1 92 aa9.48□□□□□ -0.89
COL1A1-208ENST00000494334 EIF5A2Q9GZV4 153 aaKnown RBP9.48□□□□□ -0.89
COL1A1-208ENST00000494334 A0A0J9YY99 117 aa9.47□□□□□ -0.89
COL1A1-208ENST00000494334 PGPEP1LA6NFU8 196 aa9.47□□□□□ -0.89
COL1A1-208ENST00000494334 TMEM250H0YL14 139 aa9.47□□□□□ -0.89
COL1A1-208ENST00000494334 SFTA3P0C7M3 94 aa9.47□□□□□ -0.89
COL1A1-208ENST00000494334 MGST1P10620 155 aaKnown RBP9.47□□□□□ -0.89
COL1A1-208ENST00000494334 FHL2Q14192 279 aa9.47□□□□□ -0.89
COL1A1-208ENST00000494334 PTH2Q96A98 100 aa9.47□□□□□ -0.89
COL1A1-208ENST00000494334 ZNF479Q96JC4 524 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms