RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 D6R8Y8 96 aa7.97□□□□□ -1.13
CLCN6-208ENST00000494028 H3BVH4 76 aa7.97□□□□□ -1.13
CLCN6-208ENST00000494028 OR5AL1P0C617 328 aa7.97□□□□□ -1.13
CLCN6-208ENST00000494028 MED14OSP0DP75 135 aa7.97□□□□□ -1.13
CLCN6-208ENST00000494028 KRTDAPP60985 99 aa7.97□□□□□ -1.13
CLCN6-208ENST00000494028 KIR3DS1Q14943 382 aa7.97□□□□□ -1.13
CLCN6-208ENST00000494028 TWIST1Q15672 202 aa7.97□□□□□ -1.13
CLCN6-208ENST00000494028 PSMG4Q5JS54 123 aa7.97□□□□□ -1.13
CLCN6-208ENST00000494028 HIST2H2BDQ6DRA6 164 aa7.97□□□□□ -1.13
CLCN6-208ENST00000494028 TEX43Q6ZNM6 134 aa7.97□□□□□ -1.13
CLCN6-208ENST00000494028 DUX3Q96PT4 197 aa7.97□□□□□ -1.13
CLCN6-208ENST00000494028 MSRB1Q9NZV6 116 aa7.97□□□□□ -1.13
CLCN6-208ENST00000494028 ZNF469Q96JG9 3925 aaPredicted RBP7.97□□□□□ -1.13
CLCN6-208ENST00000494028 HIVEP1P15822 2718 aa7.97□□□□□ -1.13
CLCN6-208ENST00000494028 M0R2Z0 102 aa7.96□□□□□ -1.14
CLCN6-208ENST00000494028 NCR2O95944 276 aa7.96□□□□□ -1.14
CLCN6-208ENST00000494028 SCGB1D1O95968 90 aa7.96□□□□□ -1.14
CLCN6-208ENST00000494028 C3orf79P0CE67 100 aa7.96□□□□□ -1.14
CLCN6-208ENST00000494028 SSTP61278 116 aa7.96□□□□□ -1.14
CLCN6-208ENST00000494028 PKIAP61925 76 aa7.96□□□□□ -1.14
CLCN6-208ENST00000494028 FHL3Q13643 280 aa7.96□□□□□ -1.14
CLCN6-208ENST00000494028 ORMDL3Q8N138 153 aa7.96□□□□□ -1.14
CLCN6-208ENST00000494028 OR11H1Q8NG94 326 aa7.96□□□□□ -1.14
CLCN6-208ENST00000494028 OR1N2Q8NGR9 330 aa7.96□□□□□ -1.14
CLCN6-208ENST00000494028 PRELID3AQ96N28 172 aa7.96□□□□□ -1.14
CLCN6-208ENST00000494028 PRO1933Q9H354 126 aa7.96□□□□□ -1.14
CLCN6-208ENST00000494028 IGHV4-4A0A075B6R2 117 aa7.95□□□□□ -1.14
CLCN6-208ENST00000494028 TRAV2A0A0B4J234 112 aa7.95□□□□□ -1.14
CLCN6-208ENST00000494028 SMKR1H3BMG3 65 aa7.95□□□□□ -1.14
CLCN6-208ENST00000494028 NPYP01303 97 aa7.95□□□□□ -1.14
CLCN6-208ENST00000494028 LEPP41159 167 aa7.95□□□□□ -1.14
CLCN6-208ENST00000494028 ASIPP42127 132 aa7.95□□□□□ -1.14
CLCN6-208ENST00000494028 SNRPD3P62318 126 aaKnown RBP7.95□□□□□ -1.14
CLCN6-208ENST00000494028 CACNG7P62955 275 aa7.95□□□□□ -1.14
CLCN6-208ENST00000494028 PMCHL1Q16048 86 aa7.95□□□□□ -1.14
CLCN6-208ENST00000494028 ANXA2RQ3ZCQ2 193 aa7.95□□□□□ -1.14
CLCN6-208ENST00000494028 OR9G4Q8NGQ1 327 aa7.95□□□□□ -1.14
CLCN6-208ENST00000494028 WFDC12Q8WWY7 111 aa7.95□□□□□ -1.14
CLCN6-208ENST00000494028 DPF1Q92782 380 aa7.95□□□□□ -1.14
CLCN6-208ENST00000494028 C16orf95Q9H693 158 aa7.95□□□□□ -1.14
CLCN6-208ENST00000494028 C7orf71A4D174 169 aa7.94□□□□□ -1.14
CLCN6-208ENST00000494028 A8MTW9 85 aa7.94□□□□□ -1.14
CLCN6-208ENST00000494028 TSTD3H0UI37 97 aa7.94□□□□□ -1.14
CLCN6-208ENST00000494028 NXPH4O95158 308 aa7.94□□□□□ -1.14
CLCN6-208ENST00000494028 CSN3P07498 182 aa7.94□□□□□ -1.14
CLCN6-208ENST00000494028 CD28P10747 220 aa7.94□□□□□ -1.14
CLCN6-208ENST00000494028 RNASE4P34096 147 aaKnown RBP7.94□□□□□ -1.14
CLCN6-208ENST00000494028 HILS1P60008 231 aa7.94□□□□□ -1.14
CLCN6-208ENST00000494028 SCGB2A2Q13296 93 aa7.94□□□□□ -1.14
CLCN6-208ENST00000494028 EBLN2Q6P2I7 272 aa7.94□□□□□ -1.14
CLCN6-208ENST00000494028 FOXI2Q6ZQN5 318 aa7.94□□□□□ -1.14
CLCN6-208ENST00000494028 ZNF664Q8N3J9 261 aa7.94□□□□□ -1.14
CLCN6-208ENST00000494028 DLX4Q92988 240 aaPredicted RBP7.94□□□□□ -1.14
CLCN6-208ENST00000494028 RAX2Q96IS3 184 aa7.94□□□□□ -1.14
CLCN6-208ENST00000494028 PEMTQ9UBM1 199 aa7.94□□□□□ -1.14
CLCN6-208ENST00000494028 LINC00614P0C842 121 aa7.93□□□□□ -1.14
CLCN6-208ENST00000494028 RAB4AP20338 218 aa7.93□□□□□ -1.14
CLCN6-208ENST00000494028 AMTNQ6UX39 209 aa7.93□□□□□ -1.14
CLCN6-208ENST00000494028 LINC00173Q6ZV60 143 aa7.93□□□□□ -1.14
CLCN6-208ENST00000494028 FA2HQ7L5A8 372 aa7.93□□□□□ -1.14
CLCN6-208ENST00000494028 SPATA12Q7Z6I5 190 aa7.93□□□□□ -1.14
CLCN6-208ENST00000494028 TMEM61Q8N0U2 210 aa7.93□□□□□ -1.14
CLCN6-208ENST00000494028 SMR3AQ99954 134 aa7.93□□□□□ -1.14
CLCN6-208ENST00000494028 SCRT2Q9NQ03 307 aa7.93□□□□□ -1.14
CLCN6-208ENST00000494028 SIGLEC8Q9NYZ4 499 aa7.93□□□□□ -1.14
CLCN6-208ENST00000494028 MXRA5Q9NR99 2828 aa7.93□□□□□ -1.14
CLCN6-208ENST00000494028 A0A096LNJ9 63 aa7.92□□□□□ -1.14
CLCN6-208ENST00000494028 DUSP14O95147 198 aaKnown RBP7.92□□□□□ -1.14
CLCN6-208ENST00000494028 GAS8-AS1O95177 125 aa7.92□□□□□ -1.14
CLCN6-208ENST00000494028 NDUFA7O95182 113 aa7.92□□□□□ -1.14
CLCN6-208ENST00000494028 RNASE3P12724 160 aaKnown RBP7.92□□□□□ -1.14
CLCN6-208ENST00000494028 DDTP30046 118 aa7.92□□□□□ -1.14
CLCN6-208ENST00000494028 CKS2P33552 79 aa7.92□□□□□ -1.14
CLCN6-208ENST00000494028 LINC01006Q8NI28 216 aa7.92□□□□□ -1.14
CLCN6-208ENST00000494028 DYNLRB2Q8TF09 96 aa7.92□□□□□ -1.14
CLCN6-208ENST00000494028 ZNF418Q8TF45 676 aaPredicted RBP7.92□□□□□ -1.14
CLCN6-208ENST00000494028 AP5S1Q9NUS5 200 aa7.92□□□□□ -1.14
CLCN6-208ENST00000494028 LAMTOR2Q9Y2Q5 125 aa7.92□□□□□ -1.14
CLCN6-208ENST00000494028 AGRNO00468 2067 aa7.91□□□□□ -1.14
CLCN6-208ENST00000494028 F8P00451 2351 aa7.91□□□□□ -1.14
CLCN6-208ENST00000494028 A0A1W2PRX2 142 aa7.91□□□□□ -1.14
CLCN6-208ENST00000494028 LY6G6DO95868 133 aa7.91□□□□□ -1.14
CLCN6-208ENST00000494028 PPBPP02775 128 aa7.91□□□□□ -1.14
CLCN6-208ENST00000494028 EVI2AP22794 236 aa7.91□□□□□ -1.14
CLCN6-208ENST00000494028 IFI27P40305 119 aaPredicted RBP7.91□□□□□ -1.14
CLCN6-208ENST00000494028 SPANXN1Q5VSR9 72 aa7.91□□□□□ -1.14
CLCN6-208ENST00000494028 C11orf44Q8N8P7 122 aa7.91□□□□□ -1.14
CLCN6-208ENST00000494028 CITED2Q99967 270 aaPredicted RBP7.91□□□□□ -1.14
CLCN6-208ENST00000494028 MAP1LC3AQ9H492 121 aa7.91□□□□□ -1.14
CLCN6-208ENST00000494028 MAP6D1Q9H9H5 199 aa7.91□□□□□ -1.14
CLCN6-208ENST00000494028 TIMM8BQ9Y5J9 83 aaPredicted RBP7.91□□□□□ -1.14
CLCN6-208ENST00000494028 MUC4Q99102 2169 aa7.9□□□□□ -1.14
CLCN6-208ENST00000494028 RBMY1BA6NDE4 496 aaKnown RBP7.9□□□□□ -1.14
CLCN6-208ENST00000494028 RBMY1EA6NEQ0 496 aaKnown RBP7.9□□□□□ -1.14
CLCN6-208ENST00000494028 KNCNA6PVL3 124 aa7.9□□□□□ -1.14
CLCN6-208ENST00000494028 M0R381 172 aa7.9□□□□□ -1.14
CLCN6-208ENST00000494028 SPRY2O43597 315 aa7.9□□□□□ -1.14
CLCN6-208ENST00000494028 LEPROTL1O95214 131 aa7.9□□□□□ -1.14
CLCN6-208ENST00000494028 IGKV3-20P01619 116 aa7.9□□□□□ -1.14
CLCN6-208ENST00000494028 RBMY1DP0C7P1 496 aaKnown RBP7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms