RNA–Protein interactions for RNA: ENST00000493727.5

UPF3A-210, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 937 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-210ENST00000493727 ODF3Q96PU9 254 aa8.86□□□□□ -0.99
UPF3A-210ENST00000493727 ZFP30Q9Y2G7 519 aa8.86□□□□□ -0.99
UPF3A-210ENST00000493727 KLF12Q9Y4X4 402 aa8.86□□□□□ -0.99
UPF3A-210ENST00000493727 LENEPQ9Y5L5 61 aa8.86□□□□□ -0.99
UPF3A-210ENST00000493727 TRBV6-1A0A0K0K1D8 114 aa8.85□□□□□ -0.99
UPF3A-210ENST00000493727 TMEM218A2RU14 115 aa8.85□□□□□ -0.99
UPF3A-210ENST00000493727 C9JCJ5 164 aa8.85□□□□□ -0.99
UPF3A-210ENST00000493727 F8W036 122 aa8.85□□□□□ -0.99
UPF3A-210ENST00000493727 LTAP01374 205 aa8.85□□□□□ -0.99
UPF3A-210ENST00000493727 MGST1P10620 155 aaKnown RBP8.85□□□□□ -0.99
UPF3A-210ENST00000493727 APOC4P55056 127 aa8.85□□□□□ -0.99
UPF3A-210ENST00000493727 SPINK13Q1W4C9 94 aa8.85□□□□□ -0.99
UPF3A-210ENST00000493727 IGF2BP2-AS1Q96M15 143 aa8.85□□□□□ -0.99
UPF3A-210ENST00000493727 NIPSNAP3BQ9BS92 247 aa8.85□□□□□ -0.99
UPF3A-210ENST00000493727 TP53TG1Q9Y2A0 90 aa8.85□□□□□ -0.99
UPF3A-210ENST00000493727 A8MTW9 85 aa8.84□□□□□ -0.99
UPF3A-210ENST00000493727 M0R2Z0 102 aa8.84□□□□□ -0.99
UPF3A-210ENST00000493727 UBE2CO00762 179 aa8.84□□□□□ -0.99
UPF3A-210ENST00000493727 AMBPP02760 352 aa8.84□□□□□ -0.99
UPF3A-210ENST00000493727 GPX1P07203 203 aa8.84□□□□□ -0.99
UPF3A-210ENST00000493727 CDKN1BP46527 198 aa8.84□□□□□ -0.99
UPF3A-210ENST00000493727 SMUG1Q53HV7 270 aa8.84□□□□□ -0.99
UPF3A-210ENST00000493727 MORN3Q6PF18 240 aaPredicted RBP8.84□□□□□ -0.99
UPF3A-210ENST00000493727 TMEM183AQ8IXX5 376 aa8.84□□□□□ -0.99
UPF3A-210ENST00000493727 OVOL2Q9BRP0 275 aa8.84□□□□□ -0.99
UPF3A-210ENST00000493727 TRBV7-9A0A0J9YWB2 115 aa8.83□□□□□ -1
UPF3A-210ENST00000493727 CA1P00915 261 aaPredicted RBP8.83□□□□□ -1
UPF3A-210ENST00000493727 GCGP01275 180 aa8.83□□□□□ -1
UPF3A-210ENST00000493727 INSP01308 110 aa8.83□□□□□ -1
UPF3A-210ENST00000493727 RNASE4P34096 147 aaKnown RBP8.83□□□□□ -1
UPF3A-210ENST00000493727 TMEM241Q24JQ0 296 aa8.83□□□□□ -1
UPF3A-210ENST00000493727 PRR27Q6MZM9 219 aa8.83□□□□□ -1
UPF3A-210ENST00000493727 AMTNQ6UX39 209 aa8.83□□□□□ -1
UPF3A-210ENST00000493727 Q6ZWC4 215 aa8.83□□□□□ -1
UPF3A-210ENST00000493727 LINC00476Q8WZB0 136 aa8.83□□□□□ -1
UPF3A-210ENST00000493727 SMIM12Q96EX1 92 aa8.83□□□□□ -1
UPF3A-210ENST00000493727 BIN3Q9NQY0 253 aa8.83□□□□□ -1
UPF3A-210ENST00000493727 NAT8Q9UHE5 227 aa8.83□□□□□ -1
UPF3A-210ENST00000493727 TRBV20OR9-2A0A075B6H5 130 aa8.82□□□□□ -1
UPF3A-210ENST00000493727 TRAV12-2A0A075B6T6 113 aa8.82□□□□□ -1
UPF3A-210ENST00000493727 KIR2DL5BA0A0G2JN68 375 aa8.82□□□□□ -1
UPF3A-210ENST00000493727 KIR2DL5BA0A0G2JPC4 375 aa8.82□□□□□ -1
UPF3A-210ENST00000493727 NUPR2A6NF83 97 aa8.82□□□□□ -1
UPF3A-210ENST00000493727 PGPEP1LA6NFU8 196 aa8.82□□□□□ -1
UPF3A-210ENST00000493727 CRISP2P16562 243 aa8.82□□□□□ -1
UPF3A-210ENST00000493727 BTN1A1Q13410 526 aa8.82□□□□□ -1
UPF3A-210ENST00000493727 ADIRFQ15847 76 aa8.82□□□□□ -1
UPF3A-210ENST00000493727 KIR2DL5AQ8N109 375 aa8.82□□□□□ -1
UPF3A-210ENST00000493727 ZFAND2AQ8N6M9 145 aa8.82□□□□□ -1
UPF3A-210ENST00000493727 KIR2DL5BQ8NHK3 375 aa8.82□□□□□ -1
UPF3A-210ENST00000493727 TVP23CQ96ET8 276 aa8.82□□□□□ -1
UPF3A-210ENST00000493727 FAM19A4Q96LR4 140 aa8.82□□□□□ -1
UPF3A-210ENST00000493727 C1QTNF4Q9BXJ3 329 aa8.82□□□□□ -1
UPF3A-210ENST00000493727 CSTL1Q9H114 145 aa8.82□□□□□ -1
UPF3A-210ENST00000493727 XCL2Q9UBD3 114 aa8.82□□□□□ -1
UPF3A-210ENST00000493727 C7orf71A4D174 169 aa8.81□□□□□ -1
UPF3A-210ENST00000493727 SPRY2O43597 315 aa8.81□□□□□ -1
UPF3A-210ENST00000493727 GFI1BQ5VTD9 330 aa8.81□□□□□ -1
UPF3A-210ENST00000493727 DAZAP1Q96EP5 407 aaKnown RBP8.81□□□□□ -1
UPF3A-210ENST00000493727 ZC2HC1AQ96GY0 325 aa8.81□□□□□ -1
UPF3A-210ENST00000493727 SEC11CQ9BY50 192 aa8.81□□□□□ -1
UPF3A-210ENST00000493727 LY96Q9Y6Y9 160 aa8.81□□□□□ -1
UPF3A-210ENST00000493727 TRAV12-3A0A0B4J271 114 aa8.8□□□□□ -1
UPF3A-210ENST00000493727 TRAV21A0A0B4J279 112 aa8.8□□□□□ -1
UPF3A-210ENST00000493727 CXorf65A6NEN9 183 aa8.8□□□□□ -1
UPF3A-210ENST00000493727 KLLNB2CW77 178 aa8.8□□□□□ -1
UPF3A-210ENST00000493727 KRBOX1C9JBD0 128 aa8.8□□□□□ -1
UPF3A-210ENST00000493727 ADCYAP1P18509 176 aa8.8□□□□□ -1
UPF3A-210ENST00000493727 FAM162BQ5T6X4 162 aa8.8□□□□□ -1
UPF3A-210ENST00000493727 PRR9Q5T870 116 aa8.8□□□□□ -1
UPF3A-210ENST00000493727 LINC01551Q86U37 167 aa8.8□□□□□ -1
UPF3A-210ENST00000493727 OCC1Q8TAD7 63 aa8.8□□□□□ -1
UPF3A-210ENST00000493727 TMEM208Q9BTX3 173 aa8.8□□□□□ -1
UPF3A-210ENST00000493727 MLST8Q9BVC4 326 aa8.8□□□□□ -1
UPF3A-210ENST00000493727 NAGKQ9UJ70 344 aa8.8□□□□□ -1
UPF3A-210ENST00000493727 AGRNO00468 2067 aa8.79□□□□□ -1
UPF3A-210ENST00000493727 M0R036 132 aa8.79□□□□□ -1
UPF3A-210ENST00000493727 SH2D1AO60880 128 aa8.79□□□□□ -1
UPF3A-210ENST00000493727 IGLV2-8P01709 118 aa8.79□□□□□ -1
UPF3A-210ENST00000493727 PFN1P07737 140 aaKnown RBP8.79□□□□□ -1
UPF3A-210ENST00000493727 RPL23P62829 140 aaKnown RBP8.79□□□□□ -1
UPF3A-210ENST00000493727 PNRC1Q12796 327 aaPredicted RBP8.79□□□□□ -1
UPF3A-210ENST00000493727 OR5I1Q13606 314 aa8.79□□□□□ -1
UPF3A-210ENST00000493727 DEFB135Q30KP9 77 aa8.79□□□□□ -1
UPF3A-210ENST00000493727 SDF2L1Q9HCN8 221 aa8.79□□□□□ -1
UPF3A-210ENST00000493727 KLK5Q9Y337 293 aaPredicted RBP8.79□□□□□ -1
UPF3A-210ENST00000493727 GOLT1BQ9Y3E0 138 aa8.79□□□□□ -1
UPF3A-210ENST00000493727 PKHD1P08F94 4074 aa8.79□□□□□ -1
UPF3A-210ENST00000493727 FAT2Q9NYQ8 4349 aa8.78□□□□□ -1
UPF3A-210ENST00000493727 IGHV3OR16-12A0A075B7B8 117 aa8.78□□□□□ -1
UPF3A-210ENST00000493727 A0A0J9YWU9 116 aa8.78□□□□□ -1
UPF3A-210ENST00000493727 FABP5P3A8MUU1 101 aa8.78□□□□□ -1
UPF3A-210ENST00000493727 K7EN84 100 aa8.78□□□□□ -1
UPF3A-210ENST00000493727 APOC3P02656 99 aa8.78□□□□□ -1
UPF3A-210ENST00000493727 ZNF80P51504 273 aaPredicted RBP8.78□□□□□ -1
UPF3A-210ENST00000493727 ERVFC1-1P60608 527 aa8.78□□□□□ -1
UPF3A-210ENST00000493727 ODF1Q14990 250 aa8.78□□□□□ -1
UPF3A-210ENST00000493727 COX8CQ7Z4L0 72 aa8.78□□□□□ -1
UPF3A-210ENST00000493727 RNF183Q96D59 192 aa8.78□□□□□ -1
UPF3A-210ENST00000493727 CARHSP1Q9Y2V2 147 aaKnown RBP8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms