RNA–Protein interactions for RNA: ENST00000493220.5

NF1-215, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 5,691 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-215ENST00000493220 ST20Q9HBF5 79 aa4.86□□□□□ -1.63
NF1-215ENST00000493220 ZNF492Q9P255 531 aa4.86□□□□□ -1.63
NF1-215ENST00000493220 XCL2Q9UBD3 114 aa4.86□□□□□ -1.63
NF1-215ENST00000493220 CARHSP1Q9Y2V2 147 aaKnown RBP4.86□□□□□ -1.63
NF1-215ENST00000493220 YLPM1P49750 1951 aaKnown RBP4.85□□□□□ -1.63
NF1-215ENST00000493220 BUB3O43684 328 aa4.85□□□□□ -1.63
NF1-215ENST00000493220 CRPP02741 224 aa4.85□□□□□ -1.63
NF1-215ENST00000493220 PFN1P07737 140 aaKnown RBP4.85□□□□□ -1.63
NF1-215ENST00000493220 IFI27P40305 119 aaPredicted RBP4.85□□□□□ -1.63
NF1-215ENST00000493220 ERCC8Q13216 396 aa4.85□□□□□ -1.63
NF1-215ENST00000493220 Q6ZPA2 131 aa4.85□□□□□ -1.63
NF1-215ENST00000493220 FANCD2OSQ96PS1 177 aa4.85□□□□□ -1.63
NF1-215ENST00000493220 LINC01549A6NIU2 74 aa4.85□□□□□ -1.63
NF1-215ENST00000493220 RHODO00212 210 aa4.85□□□□□ -1.63
NF1-215ENST00000493220 AVPP01185 164 aa4.85□□□□□ -1.63
NF1-215ENST00000493220 CRIP2P52943 208 aaPredicted RBP4.85□□□□□ -1.63
NF1-215ENST00000493220 CD300EQ496F6 205 aaPredicted RBP4.85□□□□□ -1.63
NF1-215ENST00000493220 GFRA4Q9GZZ7 299 aa4.85□□□□□ -1.63
NF1-215ENST00000493220 IGFL4Q6B9Z1 124 aa4.85□□□□□ -1.63
NF1-215ENST00000493220 RPL23P62829 140 aaKnown RBP4.85□□□□□ -1.63
NF1-215ENST00000493220 FAM19A2Q8N3H0 131 aa4.85□□□□□ -1.63
NF1-215ENST00000493220 DLX4Q92988 240 aaPredicted RBP4.85□□□□□ -1.63
NF1-215ENST00000493220 FXYD5Q96DB9 178 aa4.85□□□□□ -1.63
NF1-215ENST00000493220 C16orf74Q96GX8 76 aa4.85□□□□□ -1.63
NF1-215ENST00000493220 TMEM213A2RRL7 107 aa4.84□□□□□ -1.63
NF1-215ENST00000493220 IGLV1-40P01703 118 aa4.84□□□□□ -1.63
NF1-215ENST00000493220 SPINK13Q1W4C9 94 aa4.84□□□□□ -1.63
NF1-215ENST00000493220 C20orf144Q9BQM9 153 aa4.84□□□□□ -1.63
NF1-215ENST00000493220 RPL36AP83881 106 aaKnown RBP4.84□□□□□ -1.63
NF1-215ENST00000493220 C1orf229Q6ZS94 237 aaPredicted RBP4.84□□□□□ -1.63
NF1-215ENST00000493220 RPL36ALQ969Q0 106 aaKnown RBP4.84□□□□□ -1.63
NF1-215ENST00000493220 CEP250Q9BV73 2442 aa4.84□□□□□ -1.63
NF1-215ENST00000493220 PTPRQQ9UMZ3 2332 aa4.84□□□□□ -1.63
NF1-215ENST00000493220 H3BUT2 72 aa4.84□□□□□ -1.63
NF1-215ENST00000493220 BRI3O95415 125 aa4.84□□□□□ -1.63
NF1-215ENST00000493220 UTF1Q5T230 341 aa4.84□□□□□ -1.63
NF1-215ENST00000493220 HIGD1CA8MV81 97 aa4.84□□□□□ -1.64
NF1-215ENST00000493220 Q8TAT8 98 aa4.84□□□□□ -1.64
NF1-215ENST00000493220 DIDO1Q9BTC0 2240 aaKnown RBP4.84□□□□□ -1.64
NF1-215ENST00000493220 SPTBN2O15020 2390 aa4.84□□□□□ -1.64
NF1-215ENST00000493220 A8MWV9 139 aa4.83□□□□□ -1.64
NF1-215ENST00000493220 IGKV1-17P01599 117 aa4.83□□□□□ -1.64
NF1-215ENST00000493220 GAGE2BQ13066 116 aa4.83□□□□□ -1.64
NF1-215ENST00000493220 GAGE2EQ4V326 116 aa4.83□□□□□ -1.64
NF1-215ENST00000493220 ZNF747Q9BV97 191 aa4.83□□□□□ -1.64
NF1-215ENST00000493220 GAGE2DQ9UEU5 116 aa4.83□□□□□ -1.64
NF1-215ENST00000493220 A8MZ25 164 aa4.83□□□□□ -1.64
NF1-215ENST00000493220 CDK2AP2O75956 126 aa4.83□□□□□ -1.64
NF1-215ENST00000493220 PYGO2Q9BRQ0 406 aa4.83□□□□□ -1.64
NF1-215ENST00000493220 CHCHD5Q9BSY4 110 aa4.83□□□□□ -1.64
NF1-215ENST00000493220 NHP2Q9NX24 153 aaKnown RBP4.83□□□□□ -1.64
NF1-215ENST00000493220 ALPK2Q86TB3 2170 aa4.83□□□□□ -1.64
NF1-215ENST00000493220 A0A0U1RQV1 116 aa4.83□□□□□ -1.64
NF1-215ENST00000493220 GGTLC3B5MD39 225 aa4.83□□□□□ -1.64
NF1-215ENST00000493220 S100A7L2Q5SY68 101 aa4.83□□□□□ -1.64
NF1-215ENST00000493220 FAM231DQ6ZW35 169 aa4.83□□□□□ -1.64
NF1-215ENST00000493220 KLF5Q13887 457 aaPredicted RBP4.83□□□□□ -1.64
NF1-215ENST00000493220 OCC1Q8TAD7 63 aa4.83□□□□□ -1.64
NF1-215ENST00000493220 RNASE7Q9H1E1 156 aaKnown RBP4.83□□□□□ -1.64
NF1-215ENST00000493220 LINC01548A6NM66 108 aa4.83□□□□□ -1.64
NF1-215ENST00000493220 PROP1O75360 226 aa4.83□□□□□ -1.64
NF1-215ENST00000493220 HBDP02042 147 aa4.83□□□□□ -1.64
NF1-215ENST00000493220 LINC00158P58513 81 aa4.83□□□□□ -1.64
NF1-215ENST00000493220 C9orf153Q5TBE3 101 aa4.83□□□□□ -1.64
NF1-215ENST00000493220 ADARB2-AS1A8MUL3 147 aa4.82□□□□□ -1.64
NF1-215ENST00000493220 E7EUB6 86 aa4.82□□□□□ -1.64
NF1-215ENST00000493220 PLNP26678 52 aa4.82□□□□□ -1.64
NF1-215ENST00000493220 DSCAMO60469 2012 aa4.82□□□□□ -1.64
NF1-215ENST00000493220 GAGE12BA1L429 117 aa4.82□□□□□ -1.64
NF1-215ENST00000493220 BRWD1-AS2P59051 145 aa4.82□□□□□ -1.64
NF1-215ENST00000493220 ZNF493Q6ZR52 646 aa4.82□□□□□ -1.64
NF1-215ENST00000493220 PRR25Q96S07 402 aa4.82□□□□□ -1.64
NF1-215ENST00000493220 JPT2Q9H910 190 aa4.82□□□□□ -1.64
NF1-215ENST00000493220 TMEM242Q9NWH2 141 aa4.82□□□□□ -1.64
NF1-215ENST00000493220 DOPEY2Q9Y3R5 2298 aa4.82□□□□□ -1.64
NF1-215ENST00000493220 HTTP42858 3142 aa4.82□□□□□ -1.64
NF1-215ENST00000493220 TRAV8-4A0A0B4J246 113 aa4.82□□□□□ -1.64
NF1-215ENST00000493220 FAM231BA6NCW3 169 aa4.82□□□□□ -1.64
NF1-215ENST00000493220 DPM2O94777 84 aa4.82□□□□□ -1.64
NF1-215ENST00000493220 TRBV12-3P01733 135 aa4.81□□□□□ -1.64
NF1-215ENST00000493220 HSD52Q0P140 79 aa4.81□□□□□ -1.64
NF1-215ENST00000493220 SNHG12Q9BXW3 62 aa4.81□□□□□ -1.64
NF1-215ENST00000493220 KLK5Q9Y337 293 aaPredicted RBP4.81□□□□□ -1.64
NF1-215ENST00000493220 IGHV3-64A0A075B6Q5 118 aa4.81□□□□□ -1.64
NF1-215ENST00000493220 A8MWP6 167 aa4.81□□□□□ -1.64
NF1-215ENST00000493220 M0R2P5 195 aa4.81□□□□□ -1.64
NF1-215ENST00000493220 DEFB130BP0DP73 79 aa4.81□□□□□ -1.64
NF1-215ENST00000493220 DEFB130AP0DP74 79 aa4.81□□□□□ -1.64
NF1-215ENST00000493220 APRG1Q8IVJ8 170 aa4.81□□□□□ -1.64
NF1-215ENST00000493220 A0A087WX48 190 aa4.81□□□□□ -1.64
NF1-215ENST00000493220 FAM240AA0A1B0GVK7 77 aa4.81□□□□□ -1.64
NF1-215ENST00000493220 SERF1AO75920 110 aa4.81□□□□□ -1.64
NF1-215ENST00000493220 Q8N2B8 174 aa4.81□□□□□ -1.64
NF1-215ENST00000493220 BRK1Q8WUW1 75 aa4.81□□□□□ -1.64
NF1-215ENST00000493220 C8orf49Q96NF6 230 aa4.81□□□□□ -1.64
NF1-215ENST00000493220 ODF3Q96PU9 254 aa4.81□□□□□ -1.64
NF1-215ENST00000493220 KLK9Q9UKQ9 250 aa4.81□□□□□ -1.64
NF1-215ENST00000493220 RAI1Q7Z5J4 1906 aaPredicted RBP4.81□□□□□ -1.64
NF1-215ENST00000493220 TRAV9-2A0A087WT02 112 aa4.81□□□□□ -1.64
NF1-215ENST00000493220 SPART-AS1P0CW21 52 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 678.8 ms