RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 CDPF1Q6NVV7 123 aa5.67□□□□□ -1.5
SMARCB1-207ENST00000491967 GOLT1AQ6ZVE7 132 aa5.67□□□□□ -1.5
SMARCB1-207ENST00000491967 SH2D6Q7Z4S9 175 aa5.67□□□□□ -1.5
SMARCB1-207ENST00000491967 NFE4Q86UQ8 179 aa5.67□□□□□ -1.5
SMARCB1-207ENST00000491967 OR10G9Q8NGN4 311 aa5.67□□□□□ -1.5
SMARCB1-207ENST00000491967 OR10G7Q8NGN6 311 aa5.67□□□□□ -1.5
SMARCB1-207ENST00000491967 CMTM2Q8TAZ6 248 aa5.67□□□□□ -1.5
SMARCB1-207ENST00000491967 PTH2Q96A98 100 aa5.67□□□□□ -1.5
SMARCB1-207ENST00000491967 AQP10Q96PS8 301 aa5.67□□□□□ -1.5
SMARCB1-207ENST00000491967 PSMG3Q9BT73 122 aaPredicted RBP5.67□□□□□ -1.5
SMARCB1-207ENST00000491967 TNFRSF18Q9Y5U5 241 aa5.67□□□□□ -1.5
SMARCB1-207ENST00000491967 DNAH5Q8TE73 4624 aa5.66□□□□□ -1.5
SMARCB1-207ENST00000491967 TRAV9-2A0A087WT02 112 aa5.66□□□□□ -1.5
SMARCB1-207ENST00000491967 A0A087WTM6 91 aa5.66□□□□□ -1.5
SMARCB1-207ENST00000491967 TRAV8-1A0A0A6YYK1 113 aa5.66□□□□□ -1.5
SMARCB1-207ENST00000491967 A0A1W2PPV4 95 aa5.66□□□□□ -1.5
SMARCB1-207ENST00000491967 CIDEAO60543 219 aa5.66□□□□□ -1.5
SMARCB1-207ENST00000491967 TCRAP04437 139 aa5.66□□□□□ -1.5
SMARCB1-207ENST00000491967 TYMSP04818 313 aa5.66□□□□□ -1.5
SMARCB1-207ENST00000491967 ARL14EPLP0DKL9 152 aa5.66□□□□□ -1.5
SMARCB1-207ENST00000491967 GYPEP15421 78 aa5.66□□□□□ -1.5
SMARCB1-207ENST00000491967 SRIP30626 198 aa5.66□□□□□ -1.5
SMARCB1-207ENST00000491967 SERF2P84101 59 aa5.66□□□□□ -1.5
SMARCB1-207ENST00000491967 Q6ZNX1 250 aa5.66□□□□□ -1.5
SMARCB1-207ENST00000491967 C5orf17Q8NAS9 161 aa5.66□□□□□ -1.5
SMARCB1-207ENST00000491967 RAB24Q969Q5 203 aa5.66□□□□□ -1.5
SMARCB1-207ENST00000491967 KCNS1Q96KK3 526 aa5.66□□□□□ -1.5
SMARCB1-207ENST00000491967 HYLS1Q96M11 299 aa5.66□□□□□ -1.5
SMARCB1-207ENST00000491967 TXNDC17Q9BRA2 123 aa5.66□□□□□ -1.5
SMARCB1-207ENST00000491967 TREM1Q9NP99 234 aa5.66□□□□□ -1.5
SMARCB1-207ENST00000491967 C11orf21Q9P2W6 132 aa5.66□□□□□ -1.5
SMARCB1-207ENST00000491967 BOLA1Q9Y3E2 137 aa5.66□□□□□ -1.5
SMARCB1-207ENST00000491967 LY96Q9Y6Y9 160 aa5.66□□□□□ -1.5
SMARCB1-207ENST00000491967 C9JCJ5 164 aa5.65□□□□□ -1.5
SMARCB1-207ENST00000491967 GCHFRP30047 84 aa5.65□□□□□ -1.5
SMARCB1-207ENST00000491967 CDC34P49427 236 aaPredicted RBP5.65□□□□□ -1.5
SMARCB1-207ENST00000491967 ZNF80P51504 273 aaPredicted RBP5.65□□□□□ -1.5
SMARCB1-207ENST00000491967 XGP55808 180 aa5.65□□□□□ -1.5
SMARCB1-207ENST00000491967 GNG5P63218 68 aa5.65□□□□□ -1.5
SMARCB1-207ENST00000491967 Q5BKY6 102 aa5.65□□□□□ -1.5
SMARCB1-207ENST00000491967 PIK3CD-AS1Q5SR53 167 aa5.65□□□□□ -1.5
SMARCB1-207ENST00000491967 WFDC10BQ8IUB3 73 aa5.65□□□□□ -1.5
SMARCB1-207ENST00000491967 OR4C5Q8NGB2 326 aa5.65□□□□□ -1.5
SMARCB1-207ENST00000491967 C9orf85Q96MD7 179 aa5.65□□□□□ -1.5
SMARCB1-207ENST00000491967 SDF2L1Q9HCN8 221 aa5.65□□□□□ -1.5
SMARCB1-207ENST00000491967 MSRB1Q9NZV6 116 aa5.65□□□□□ -1.5
SMARCB1-207ENST00000491967 TNFSF18Q9UNG2 199 aa5.65□□□□□ -1.5
SMARCB1-207ENST00000491967 A0A1B0GVG6 124 aa5.64□□□□□ -1.51
SMARCB1-207ENST00000491967 TRBV6-4A0A1B0GX49 114 aa5.64□□□□□ -1.51
SMARCB1-207ENST00000491967 FBLL1A6NHQ2 334 aaKnown RBP5.64□□□□□ -1.51
SMARCB1-207ENST00000491967 F6UZH7 168 aa5.64□□□□□ -1.51
SMARCB1-207ENST00000491967 TAAR5O14804 337 aa5.64□□□□□ -1.51
SMARCB1-207ENST00000491967 HMGB3O15347 200 aaKnown RBP5.64□□□□□ -1.51
SMARCB1-207ENST00000491967 RS1O15537 224 aa5.64□□□□□ -1.51
SMARCB1-207ENST00000491967 MBP02144 154 aa5.64□□□□□ -1.51
SMARCB1-207ENST00000491967 PFN1P07737 140 aaKnown RBP5.64□□□□□ -1.51
SMARCB1-207ENST00000491967 ATP6V0CP27449 155 aa5.64□□□□□ -1.51
SMARCB1-207ENST00000491967 ERVFC1-1P60608 527 aa5.64□□□□□ -1.51
SMARCB1-207ENST00000491967 LINC01556Q5JQF7 62 aa5.64□□□□□ -1.51
SMARCB1-207ENST00000491967 CFAP126Q5VTH2 177 aa5.64□□□□□ -1.51
SMARCB1-207ENST00000491967 DPPA3Q6W0C5 159 aa5.64□□□□□ -1.51
SMARCB1-207ENST00000491967 ASB13Q8WXK3 278 aa5.64□□□□□ -1.51
SMARCB1-207ENST00000491967 SCRT2Q9NQ03 307 aa5.64□□□□□ -1.51
SMARCB1-207ENST00000491967 EPDR1Q9UM22 224 aa5.64□□□□□ -1.51
SMARCB1-207ENST00000491967 PSG8Q9UQ74 426 aa5.64□□□□□ -1.51
SMARCB1-207ENST00000491967 LOC100131303A0A0U1RQF7 123 aa5.63□□□□□ -1.51
SMARCB1-207ENST00000491967 A0A1W2PRE2 83 aa5.63□□□□□ -1.51
SMARCB1-207ENST00000491967 LRCOL1A6NCL2 159 aa5.63□□□□□ -1.51
SMARCB1-207ENST00000491967 RNF222A6NCQ9 220 aa5.63□□□□□ -1.51
SMARCB1-207ENST00000491967 IBA57-AS1B1ANH7 110 aa5.63□□□□□ -1.51
SMARCB1-207ENST00000491967 GGTLC3B5MD39 225 aa5.63□□□□□ -1.51
SMARCB1-207ENST00000491967 CXorf1O96002 111 aa5.63□□□□□ -1.51
SMARCB1-207ENST00000491967 RNASE3P12724 160 aaKnown RBP5.63□□□□□ -1.51
SMARCB1-207ENST00000491967 EVI2AP22794 236 aa5.63□□□□□ -1.51
SMARCB1-207ENST00000491967 ZNF876PQ49A33 203 aa5.63□□□□□ -1.51
SMARCB1-207ENST00000491967 COX8CQ7Z4L0 72 aa5.63□□□□□ -1.51
SMARCB1-207ENST00000491967 C10orf126Q8N4M7 172 aa5.63□□□□□ -1.51
SMARCB1-207ENST00000491967 SLC25A29Q8N8R3 303 aa5.63□□□□□ -1.51
SMARCB1-207ENST00000491967 TMEM75Q8N9X5 138 aa5.63□□□□□ -1.51
SMARCB1-207ENST00000491967 HSD17B11Q8NBQ5 300 aa5.63□□□□□ -1.51
SMARCB1-207ENST00000491967 PCNPQ8WW12 178 aaKnown RBP5.63□□□□□ -1.51
SMARCB1-207ENST00000491967 TMEM167BQ9NRX6 74 aa5.63□□□□□ -1.51
SMARCB1-207ENST00000491967 NAGKQ9UJ70 344 aa5.63□□□□□ -1.51
SMARCB1-207ENST00000491967 IGHV3-38A0A0C4DH36 116 aa5.62□□□□□ -1.51
SMARCB1-207ENST00000491967 EREGO14944 169 aa5.62□□□□□ -1.51
SMARCB1-207ENST00000491967 GCGP01275 180 aa5.62□□□□□ -1.51
SMARCB1-207ENST00000491967 GIPP09681 153 aaPredicted RBP5.62□□□□□ -1.51
SMARCB1-207ENST00000491967 LINC00694P0DN24 101 aa5.62□□□□□ -1.51
SMARCB1-207ENST00000491967 KRTAP10-1P60331 282 aa5.62□□□□□ -1.51
SMARCB1-207ENST00000491967 SUMO1P63165 101 aaKnown RBP5.62□□□□□ -1.51
SMARCB1-207ENST00000491967 FLI1Q01543 452 aaPredicted RBP5.62□□□□□ -1.51
SMARCB1-207ENST00000491967 ZNF726P1Q15940 193 aa5.62□□□□□ -1.51
SMARCB1-207ENST00000491967 SAPCD1Q5SSQ6 148 aa5.62□□□□□ -1.51
SMARCB1-207ENST00000491967 DNLZQ5SXM8 178 aa5.62□□□□□ -1.51
SMARCB1-207ENST00000491967 UFSP1Q6NVU6 142 aa5.62□□□□□ -1.51
SMARCB1-207ENST00000491967 CYB561D1Q8N8Q1 229 aa5.62□□□□□ -1.51
SMARCB1-207ENST00000491967 SGK494Q96LW2 274 aa5.62□□□□□ -1.51
SMARCB1-207ENST00000491967 NDFIP1Q9BT67 221 aa5.62□□□□□ -1.51
SMARCB1-207ENST00000491967 SH3BGRL3Q9H299 93 aa5.62□□□□□ -1.51
SMARCB1-207ENST00000491967 RPH3ALQ9UNE2 315 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms