RNA–Protein interactions for RNA: ENST00000491060.1

TRAIP-211, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 1,046 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-211ENST00000491060 G3V3Q6 166 aa9.38□□□□□ -0.91
TRAIP-211ENST00000491060 GCGP01275 180 aa9.38□□□□□ -0.91
TRAIP-211ENST00000491060 CRYBA4P53673 196 aa9.38□□□□□ -0.91
TRAIP-211ENST00000491060 C5orf17Q8NAS9 161 aa9.38□□□□□ -0.91
TRAIP-211ENST00000491060 OR4C5Q8NGB2 326 aa9.38□□□□□ -0.91
TRAIP-211ENST00000491060 ASB13Q8WXK3 278 aa9.38□□□□□ -0.91
TRAIP-211ENST00000491060 C11orf21Q9P2W6 132 aa9.38□□□□□ -0.91
TRAIP-211ENST00000491060 MRPS16Q9Y3D3 137 aaKnown RBP9.38□□□□□ -0.91
TRAIP-211ENST00000491060 DYNC1H1Q14204 4646 aaKnown RBP9.38□□□□□ -0.91
TRAIP-211ENST00000491060 TRBV7-9A0A0J9YWB2 115 aa9.37□□□□□ -0.91
TRAIP-211ENST00000491060 K7EQM0 130 aa9.37□□□□□ -0.91
TRAIP-211ENST00000491060 NXPH4O95158 308 aa9.37□□□□□ -0.91
TRAIP-211ENST00000491060 GYPEP15421 78 aa9.37□□□□□ -0.91
TRAIP-211ENST00000491060 SERF2P84101 59 aa9.37□□□□□ -0.91
TRAIP-211ENST00000491060 FLI1Q01543 452 aaPredicted RBP9.37□□□□□ -0.91
TRAIP-211ENST00000491060 TMEM167BQ9NRX6 74 aa9.37□□□□□ -0.91
TRAIP-211ENST00000491060 PRO0255Q9UI72 69 aa9.37□□□□□ -0.91
TRAIP-211ENST00000491060 EPDR1Q9UM22 224 aa9.37□□□□□ -0.91
TRAIP-211ENST00000491060 LENEPQ9Y5L5 61 aa9.37□□□□□ -0.91
TRAIP-211ENST00000491060 CTXND1A0A1B0GTU2 59 aa9.36□□□□□ -0.91
TRAIP-211ENST00000491060 FUSP35637 526 aaKnown RBP eCLIP9.36□□□□□ -0.91
TRAIP-211ENST00000491060 ZFP69Q49AA0 526 aa9.36□□□□□ -0.91
TRAIP-211ENST00000491060 PCNPQ8WW12 178 aaKnown RBP9.36□□□□□ -0.91
TRAIP-211ENST00000491060 TMED6Q8WW62 240 aa9.36□□□□□ -0.91
TRAIP-211ENST00000491060 TNFRSF18Q9Y5U5 241 aa9.36□□□□□ -0.91
TRAIP-211ENST00000491060 MAP1LC3B2A6NCE7 125 aa9.35□□□□□ -0.91
TRAIP-211ENST00000491060 M0R2P5 195 aa9.35□□□□□ -0.91
TRAIP-211ENST00000491060 IGLV2-11P01706 119 aa9.35□□□□□ -0.91
TRAIP-211ENST00000491060 SRIP30626 198 aa9.35□□□□□ -0.91
TRAIP-211ENST00000491060 FHITP49789 147 aa9.35□□□□□ -0.91
TRAIP-211ENST00000491060 CYB561D1Q8N8Q1 229 aa9.35□□□□□ -0.91
TRAIP-211ENST00000491060 NHLRC2Q8NBF2 726 aa9.35□□□□□ -0.91
TRAIP-211ENST00000491060 SPXQ9BT56 116 aa9.35□□□□□ -0.91
TRAIP-211ENST00000491060 MAP1LC3BQ9GZQ8 125 aa9.35□□□□□ -0.91
TRAIP-211ENST00000491060 CYTL1Q9NRR1 136 aa9.35□□□□□ -0.91
TRAIP-211ENST00000491060 C16orf90A8MZG2 172 aa9.34□□□□□ -0.91
TRAIP-211ENST00000491060 H3BNG1 76 aa9.34□□□□□ -0.91
TRAIP-211ENST00000491060 K7EQD1 137 aa9.34□□□□□ -0.91
TRAIP-211ENST00000491060 SIVA1O15304 175 aa9.34□□□□□ -0.91
TRAIP-211ENST00000491060 MRPL23Q16540 153 aaKnown RBP9.34□□□□□ -0.91
TRAIP-211ENST00000491060 SMUG1Q53HV7 270 aa9.34□□□□□ -0.91
TRAIP-211ENST00000491060 LYPD5Q6UWN5 251 aa9.34□□□□□ -0.91
TRAIP-211ENST00000491060 C18orf15Q96N68 181 aa9.34□□□□□ -0.91
TRAIP-211ENST00000491060 DNAH11Q96DT5 4516 aa9.33□□□□□ -0.92
TRAIP-211ENST00000491060 TRAV4A0A0B4J268 109 aa9.33□□□□□ -0.92
TRAIP-211ENST00000491060 PEX7O00628 323 aa9.33□□□□□ -0.92
TRAIP-211ENST00000491060 LINC00315P59091 139 aa9.33□□□□□ -0.92
TRAIP-211ENST00000491060 TTC32Q5I0X7 151 aa9.33□□□□□ -0.92
TRAIP-211ENST00000491060 CST9LP1Q5W188 147 aa9.33□□□□□ -0.92
TRAIP-211ENST00000491060 DPPA3Q6W0C5 159 aa9.33□□□□□ -0.92
TRAIP-211ENST00000491060 SPATA12Q7Z6I5 190 aa9.33□□□□□ -0.92
TRAIP-211ENST00000491060 WFDC10BQ8IUB3 73 aa9.33□□□□□ -0.92
TRAIP-211ENST00000491060 SUN5Q8TC36 379 aa9.33□□□□□ -0.92
TRAIP-211ENST00000491060 RASL10AQ92737 203 aa9.33□□□□□ -0.92
TRAIP-211ENST00000491060 KCNS1Q96KK3 526 aa9.33□□□□□ -0.92
TRAIP-211ENST00000491060 ARL2-SNX15V9GYD0 113 aa9.33□□□□□ -0.92
TRAIP-211ENST00000491060 PKHD1P08F94 4074 aa9.32□□□□□ -0.92
TRAIP-211ENST00000491060 TMSB15BA0A087X1C1 80 aa9.32□□□□□ -0.92
TRAIP-211ENST00000491060 GRIFINA4D1Z8 144 aa9.32□□□□□ -0.92
TRAIP-211ENST00000491060 PGPEP1LA6NFU8 196 aa9.32□□□□□ -0.92
TRAIP-211ENST00000491060 FAM74A7A6NL05 159 aa9.32□□□□□ -0.92
TRAIP-211ENST00000491060 M0R036 132 aa9.32□□□□□ -0.92
TRAIP-211ENST00000491060 TAAR5O14804 337 aa9.32□□□□□ -0.92
TRAIP-211ENST00000491060 ZNF876PQ49A33 203 aa9.32□□□□□ -0.92
TRAIP-211ENST00000491060 NEGR1Q7Z3B1 354 aa9.32□□□□□ -0.92
TRAIP-211ENST00000491060 OR11H4Q8NGC9 324 aa9.32□□□□□ -0.92
TRAIP-211ENST00000491060 FAM213BQ8TBF2 198 aa9.32□□□□□ -0.92
TRAIP-211ENST00000491060 UPK3BQ9BT76 320 aa9.32□□□□□ -0.92
TRAIP-211ENST00000491060 ZNF471Q9BX82 626 aaPredicted RBP9.32□□□□□ -0.92
TRAIP-211ENST00000491060 KRTAP17-1Q9BYP8 105 aa9.32□□□□□ -0.92
TRAIP-211ENST00000491060 SERTM2A0A1B0GWG4 89 aa9.31□□□□□ -0.92
TRAIP-211ENST00000491060 A0A1W2PRE2 83 aa9.31□□□□□ -0.92
TRAIP-211ENST00000491060 ORM1P02763 201 aa9.31□□□□□ -0.92
TRAIP-211ENST00000491060 PFN1P07737 140 aaKnown RBP9.31□□□□□ -0.92
TRAIP-211ENST00000491060 S100A4P26447 101 aaKnown RBP9.31□□□□□ -0.92
TRAIP-211ENST00000491060 SLAQ13239 276 aa9.31□□□□□ -0.92
TRAIP-211ENST00000491060 TDRG1Q3Y452 100 aa9.31□□□□□ -0.92
TRAIP-211ENST00000491060 Q86TA4 180 aa9.31□□□□□ -0.92
TRAIP-211ENST00000491060 FBLL1A6NHQ2 334 aaKnown RBP9.3□□□□□ -0.92
TRAIP-211ENST00000491060 PPT1P50897 306 aa9.3□□□□□ -0.92
TRAIP-211ENST00000491060 LGALSLQ3ZCW2 172 aaPredicted RBP9.3□□□□□ -0.92
TRAIP-211ENST00000491060 ZNF506Q5JVG8 444 aa9.3□□□□□ -0.92
TRAIP-211ENST00000491060 IGKV3D-20A0A0C4DH25 116 aa9.29□□□□□ -0.92
TRAIP-211ENST00000491060 KANTRA0A1W2PQU2 76 aa9.29□□□□□ -0.92
TRAIP-211ENST00000491060 H3BVH4 76 aa9.29□□□□□ -0.92
TRAIP-211ENST00000491060 PAGE4O60829 102 aa9.29□□□□□ -0.92
TRAIP-211ENST00000491060 MED14OSP0DP75 135 aa9.29□□□□□ -0.92
TRAIP-211ENST00000491060 UBE2G1P62253 170 aa9.29□□□□□ -0.92
TRAIP-211ENST00000491060 SAPCD1Q5SSQ6 148 aa9.29□□□□□ -0.92
TRAIP-211ENST00000491060 CFAP126Q5VTH2 177 aa9.29□□□□□ -0.92
TRAIP-211ENST00000491060 KCNRGQ8N5I3 272 aa9.29□□□□□ -0.92
TRAIP-211ENST00000491060 ARL6IP6Q8N6S5 226 aa9.29□□□□□ -0.92
TRAIP-211ENST00000491060 ZC2HC1AQ96GY0 325 aa9.29□□□□□ -0.92
TRAIP-211ENST00000491060 JPT2Q9H910 190 aa9.29□□□□□ -0.92
TRAIP-211ENST00000491060 B4DEV8 164 aa9.28□□□□□ -0.92
TRAIP-211ENST00000491060 RS1O15537 224 aa9.28□□□□□ -0.92
TRAIP-211ENST00000491060 SH2D1AO60880 128 aa9.28□□□□□ -0.92
TRAIP-211ENST00000491060 PFDN1O60925 122 aa9.28□□□□□ -0.92
TRAIP-211ENST00000491060 RNASE3P12724 160 aaKnown RBP9.28□□□□□ -0.92
TRAIP-211ENST00000491060 AKR1C3P42330 323 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms