RNA–Protein interactions for RNA: ENST00000490677.1

HOXB3-211, Transcript of homeobox B3, humanhuman

TSL 1 (best) BASIC

Gene HOXB3, Length 1,109 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-211ENST00000490677 K7EQD1 137 aa18.96■□□□□ 0.63
HOXB3-211ENST00000490677 TREM1Q9NP99 234 aa18.96■□□□□ 0.63
HOXB3-211ENST00000490677 TRAV21A0A0B4J279 112 aa18.95■□□□□ 0.62
HOXB3-211ENST00000490677 NEGR1Q7Z3B1 354 aa18.95■□□□□ 0.62
HOXB3-211ENST00000490677 SGK494Q96LW2 274 aa18.95■□□□□ 0.62
HOXB3-211ENST00000490677 MED28Q9H204 178 aa18.95■□□□□ 0.62
HOXB3-211ENST00000490677 SH3BGRL3Q9H299 93 aa18.95■□□□□ 0.62
HOXB3-211ENST00000490677 C11orf21Q9P2W6 132 aa18.95■□□□□ 0.62
HOXB3-211ENST00000490677 TRAV4A0A0B4J268 109 aa18.94■□□□□ 0.62
HOXB3-211ENST00000490677 IGLV2-11P01706 119 aa18.94■□□□□ 0.62
HOXB3-211ENST00000490677 GCHFRP30047 84 aa18.94■□□□□ 0.62
HOXB3-211ENST00000490677 ZNF80P51504 273 aaPredicted RBP18.94■□□□□ 0.62
HOXB3-211ENST00000490677 M0R2P5 195 aa18.93■□□□□ 0.62
HOXB3-211ENST00000490677 TCRAP04437 139 aa18.93■□□□□ 0.62
HOXB3-211ENST00000490677 RNF222A6NCQ9 220 aa18.92■□□□□ 0.62
HOXB3-211ENST00000490677 GGTLC3B5MD39 225 aa18.92■□□□□ 0.62
HOXB3-211ENST00000490677 SERF2P84101 59 aa18.92■□□□□ 0.62
HOXB3-211ENST00000490677 C5orf17Q8NAS9 161 aa18.92■□□□□ 0.62
HOXB3-211ENST00000490677 TNFRSF18Q9Y5U5 241 aa18.92■□□□□ 0.62
HOXB3-211ENST00000490677 GYPEP15421 78 aa18.91■□□□□ 0.62
HOXB3-211ENST00000490677 SERTM2A0A1B0GWG4 89 aa18.9■□□□□ 0.62
HOXB3-211ENST00000490677 GIPP09681 153 aaPredicted RBP18.9■□□□□ 0.62
HOXB3-211ENST00000490677 SRIP30626 198 aa18.89■□□□□ 0.61
HOXB3-211ENST00000490677 WFDC10BQ8IUB3 73 aa18.89■□□□□ 0.61
HOXB3-211ENST00000490677 KCNS1Q96KK3 526 aa18.89■□□□□ 0.61
HOXB3-211ENST00000490677 SDF2L1Q9HCN8 221 aa18.89■□□□□ 0.61
HOXB3-211ENST00000490677 TNFSF18Q9UNG2 199 aa18.89■□□□□ 0.61
HOXB3-211ENST00000490677 LOC100131303A0A0U1RQF7 123 aa18.88■□□□□ 0.61
HOXB3-211ENST00000490677 MBP02144 154 aa18.88■□□□□ 0.61
HOXB3-211ENST00000490677 ORM1P02763 201 aa18.88■□□□□ 0.61
HOXB3-211ENST00000490677 OR4C5Q8NGB2 326 aa18.88■□□□□ 0.61
HOXB3-211ENST00000490677 ASB13Q8WXK3 278 aa18.88■□□□□ 0.61
HOXB3-211ENST00000490677 PSG8Q9UQ74 426 aa18.88■□□□□ 0.61
HOXB3-211ENST00000490677 G3V3Q6 166 aa18.87■□□□□ 0.61
HOXB3-211ENST00000490677 SUMO1P63165 101 aaKnown RBP18.87■□□□□ 0.61
HOXB3-211ENST00000490677 ZNF726P1Q15940 193 aa18.87■□□□□ 0.61
HOXB3-211ENST00000490677 RPL7L1Q6DKI1 246 aaKnown RBP18.87■□□□□ 0.61
HOXB3-211ENST00000490677 EPDR1Q9UM22 224 aa18.87■□□□□ 0.61
HOXB3-211ENST00000490677 CXorf1O96002 111 aa18.86■□□□□ 0.61
HOXB3-211ENST00000490677 GATA1P15976 413 aaPredicted RBP18.86■□□□□ 0.61
HOXB3-211ENST00000490677 TMEM75Q8N9X5 138 aa18.86■□□□□ 0.61
HOXB3-211ENST00000490677 DPPA3Q6W0C5 159 aa18.85■□□□□ 0.61
HOXB3-211ENST00000490677 C9orf85Q96MD7 179 aa18.85■□□□□ 0.61
HOXB3-211ENST00000490677 ACTR3CQ9C0K3 210 aaPredicted RBP18.85■□□□□ 0.61
HOXB3-211ENST00000490677 TMEM167BQ9NRX6 74 aa18.85■□□□□ 0.61
HOXB3-211ENST00000490677 C9JCJ5 164 aa18.84■□□□□ 0.61
HOXB3-211ENST00000490677 GCGP01275 180 aa18.84■□□□□ 0.61
HOXB3-211ENST00000490677 DNAH10OSP0CZ25 163 aa18.84■□□□□ 0.61
HOXB3-211ENST00000490677 FLI1Q01543 452 aaPredicted RBP18.84■□□□□ 0.61
HOXB3-211ENST00000490677 PCNPQ8WW12 178 aaKnown RBP18.84■□□□□ 0.61
HOXB3-211ENST00000490677 NDFIP1Q9BT67 221 aa18.84■□□□□ 0.61
HOXB3-211ENST00000490677 PFN1P07737 140 aaKnown RBP18.83■□□□□ 0.6
HOXB3-211ENST00000490677 MAPKAPK5-AS1Q8N8E1 139 aa18.83■□□□□ 0.6
HOXB3-211ENST00000490677 CYB561D1Q8N8Q1 229 aa18.83■□□□□ 0.6
HOXB3-211ENST00000490677 LY96Q9Y6Y9 160 aa18.83■□□□□ 0.6
HOXB3-211ENST00000490677 TXNDC17Q9BRA2 123 aa18.82■□□□□ 0.6
HOXB3-211ENST00000490677 A0A1W2PRE2 83 aa18.81■□□□□ 0.6
HOXB3-211ENST00000490677 TAAR5O14804 337 aa18.81■□□□□ 0.6
HOXB3-211ENST00000490677 RS1O15537 224 aa18.81■□□□□ 0.6
HOXB3-211ENST00000490677 RNASE3P12724 160 aaKnown RBP18.81■□□□□ 0.6
HOXB3-211ENST00000490677 ZNF876PQ49A33 203 aa18.81■□□□□ 0.6
HOXB3-211ENST00000490677 CFAP126Q5VTH2 177 aa18.81■□□□□ 0.6
HOXB3-211ENST00000490677 PRNTQ86SH4 94 aa18.81■□□□□ 0.6
HOXB3-211ENST00000490677 INO80EQ8NBZ0 244 aaPredicted RBP18.81■□□□□ 0.6
HOXB3-211ENST00000490677 LINC00479Q96M42 142 aa18.81■□□□□ 0.6
HOXB3-211ENST00000490677 FXYD6-FXYD2A0A087WZ82 144 aa18.8■□□□□ 0.6
HOXB3-211ENST00000490677 K7EQM0 130 aa18.8■□□□□ 0.6
HOXB3-211ENST00000490677 FUSP35637 526 aaKnown RBP eCLIP18.8■□□□□ 0.6
HOXB3-211ENST00000490677 TIRAPP58753 221 aa18.8■□□□□ 0.6
HOXB3-211ENST00000490677 SMUG1Q53HV7 270 aa18.8■□□□□ 0.6
HOXB3-211ENST00000490677 K7EP13 123 aa18.79■□□□□ 0.6
HOXB3-211ENST00000490677 SLC25A29Q8N8R3 303 aa18.79■□□□□ 0.6
HOXB3-211ENST00000490677 OR2T35Q8NGX2 323 aa18.79■□□□□ 0.6
HOXB3-211ENST00000490677 PTH2Q96A98 100 aa18.79■□□□□ 0.6
HOXB3-211ENST00000490677 CTXND1A0A1B0GTU2 59 aa18.78■□□□□ 0.6
HOXB3-211ENST00000490677 PGPEP1LA6NFU8 196 aa18.78■□□□□ 0.6
HOXB3-211ENST00000490677 FBLL1A6NHQ2 334 aaKnown RBP18.78■□□□□ 0.6
HOXB3-211ENST00000490677 NFE4Q86UQ8 179 aa18.78■□□□□ 0.6
HOXB3-211ENST00000490677 Q8N1X5 172 aa18.78■□□□□ 0.6
HOXB3-211ENST00000490677 TRAV9-2A0A087WT02 112 aa18.77■□□□□ 0.6
HOXB3-211ENST00000490677 TRAV34A0A0B4J273 112 aa18.77■□□□□ 0.6
HOXB3-211ENST00000490677 IGKV3D-20A0A0C4DH25 116 aa18.77■□□□□ 0.6
HOXB3-211ENST00000490677 ZNF506Q5JVG8 444 aa18.77■□□□□ 0.6
HOXB3-211ENST00000490677 MSRB1Q9NZV6 116 aa18.77■□□□□ 0.6
HOXB3-211ENST00000490677 BORCS7-ASMTA0A0B4J1R7 106 aa18.76■□□□□ 0.59
HOXB3-211ENST00000490677 SH2D6Q7Z4S9 175 aa18.76■□□□□ 0.59
HOXB3-211ENST00000490677 CYTL1Q9NRR1 136 aa18.76■□□□□ 0.59
HOXB3-211ENST00000490677 A0A087WTM6 91 aa18.75■□□□□ 0.59
HOXB3-211ENST00000490677 EVI2AP22794 236 aa18.75■□□□□ 0.59
HOXB3-211ENST00000490677 ERVFC1-1P60608 527 aa18.75■□□□□ 0.59
HOXB3-211ENST00000490677 SAPCD1Q5SSQ6 148 aa18.75■□□□□ 0.59
HOXB3-211ENST00000490677 ARL2-SNX15V9GYD0 113 aa18.75■□□□□ 0.59
HOXB3-211ENST00000490677 TRBV6-4A0A1B0GX49 114 aa18.74■□□□□ 0.59
HOXB3-211ENST00000490677 ZFP69Q49AA0 526 aa18.74■□□□□ 0.59
HOXB3-211ENST00000490677 PGPEP1Q9NXJ5 209 aa18.74■□□□□ 0.59
HOXB3-211ENST00000490677 FAT1Q14517 4588 aa18.73■□□□□ 0.59
HOXB3-211ENST00000490677 IGHV3-73A0A0B4J1V6 119 aa18.73■□□□□ 0.59
HOXB3-211ENST00000490677 FAM74A7A6NL05 159 aa18.73■□□□□ 0.59
HOXB3-211ENST00000490677 CIDEAO60543 219 aa18.73■□□□□ 0.59
HOXB3-211ENST00000490677 FGF8P55075 233 aaPredicted RBP18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms