RNA–Protein interactions for RNA: ENST00000490638.5

ARHGEF39-205, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 1 (best)

Gene ARHGEF39, Length 4,498 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-205ENST00000490638 PSCAO43653 123 aa11.16□□□□□ -0.62
ARHGEF39-205ENST00000490638 Q6ZPA2 131 aa11.16□□□□□ -0.62
ARHGEF39-205ENST00000490638 OR5A1Q8NGJ0 315 aa11.16□□□□□ -0.62
ARHGEF39-205ENST00000490638 SMIM12Q96EX1 92 aa11.16□□□□□ -0.62
ARHGEF39-205ENST00000490638 PMCHL2Q9BQD1 86 aa11.16□□□□□ -0.62
ARHGEF39-205ENST00000490638 CTAG1AP78358 180 aa11.16□□□□□ -0.62
ARHGEF39-205ENST00000490638 CFHR4Q92496 578 aa11.16□□□□□ -0.62
ARHGEF39-205ENST00000490638 SRSF2Q01130 221 aaKnown RBP11.16□□□□□ -0.62
ARHGEF39-205ENST00000490638 CD300EQ496F6 205 aaPredicted RBP11.15□□□□□ -0.62
ARHGEF39-205ENST00000490638 CSTL1Q9H114 145 aa11.15□□□□□ -0.62
ARHGEF39-205ENST00000490638 IGHG4P01861 327 aa11.15□□□□□ -0.62
ARHGEF39-205ENST00000490638 TMEM61Q8N0U2 210 aa11.15□□□□□ -0.62
ARHGEF39-205ENST00000490638 MRPL36Q9P0J6 103 aaKnown RBP11.15□□□□□ -0.62
ARHGEF39-205ENST00000490638 A8MWV9 139 aa11.15□□□□□ -0.62
ARHGEF39-205ENST00000490638 Q6ZSV7 163 aa11.15□□□□□ -0.62
ARHGEF39-205ENST00000490638 MAST4O15021 2626 aa11.15□□□□□ -0.62
ARHGEF39-205ENST00000490638 SMKR1H3BMG3 65 aa11.15□□□□□ -0.63
ARHGEF39-205ENST00000490638 J3QR89 54 aa11.15□□□□□ -0.63
ARHGEF39-205ENST00000490638 K7EMT4 169 aa11.15□□□□□ -0.63
ARHGEF39-205ENST00000490638 TRBV12-3P01733 135 aa11.15□□□□□ -0.63
ARHGEF39-205ENST00000490638 NIT1Q86X76 327 aa11.15□□□□□ -0.63
ARHGEF39-205ENST00000490638 C9JQL5 133 aa11.14□□□□□ -0.63
ARHGEF39-205ENST00000490638 COX6CP09669 75 aa11.14□□□□□ -0.63
ARHGEF39-205ENST00000490638 ZNF124Q15973 351 aa11.14□□□□□ -0.63
ARHGEF39-205ENST00000490638 COPS9Q8WXC6 57 aa11.14□□□□□ -0.63
ARHGEF39-205ENST00000490638 ZNF295-AS1Q8N0V1 137 aa11.14□□□□□ -0.63
ARHGEF39-205ENST00000490638 IFI27L1Q96BM0 104 aa11.14□□□□□ -0.63
ARHGEF39-205ENST00000490638 ZNF492Q9P255 531 aa11.14□□□□□ -0.63
ARHGEF39-205ENST00000490638 TMEM213A2RRL7 107 aa11.13□□□□□ -0.63
ARHGEF39-205ENST00000490638 VWC2Q2TAL6 325 aa11.13□□□□□ -0.63
ARHGEF39-205ENST00000490638 DLX4Q92988 240 aaPredicted RBP11.13□□□□□ -0.63
ARHGEF39-205ENST00000490638 LOC102724200A0A096LPH7 203 aaPredicted RBP11.13□□□□□ -0.63
ARHGEF39-205ENST00000490638 CXCL1P09341 107 aa11.13□□□□□ -0.63
ARHGEF39-205ENST00000490638 LAGE3Q14657 143 aa11.13□□□□□ -0.63
ARHGEF39-205ENST00000490638 C16orf54Q6UWD8 224 aa11.13□□□□□ -0.63
ARHGEF39-205ENST00000490638 PYGO2Q9BRQ0 406 aa11.13□□□□□ -0.63
ARHGEF39-205ENST00000490638 LINC01549A6NIU2 74 aa11.13□□□□□ -0.63
ARHGEF39-205ENST00000490638 UNQ9165/PRO28630Q6UXU0 137 aa11.13□□□□□ -0.63
ARHGEF39-205ENST00000490638 PATE2Q6UY27 113 aa11.13□□□□□ -0.63
ARHGEF39-205ENST00000490638 C4orf3Q8WVX3 66 aa11.13□□□□□ -0.63
ARHGEF39-205ENST00000490638 SMR3AQ99954 134 aa11.13□□□□□ -0.63
ARHGEF39-205ENST00000490638 INS-IGF2F8WCM5 200 aa11.13□□□□□ -0.63
ARHGEF39-205ENST00000490638 RASL11AQ6T310 242 aa11.12□□□□□ -0.63
ARHGEF39-205ENST00000490638 ARL6IP6Q8N6S5 226 aa11.12□□□□□ -0.63
ARHGEF39-205ENST00000490638 COL6A3P12111 3177 aa11.12□□□□□ -0.63
ARHGEF39-205ENST00000490638 IGKV1OR2-108A0A075B7D4 117 aa11.12□□□□□ -0.63
ARHGEF39-205ENST00000490638 LOC107984156A0A0G2JMH3 177 aa11.12□□□□□ -0.63
ARHGEF39-205ENST00000490638 IGF1P05019 195 aa11.12□□□□□ -0.63
ARHGEF39-205ENST00000490638 ARL17AQ8IVW1 177 aa11.12□□□□□ -0.63
ARHGEF39-205ENST00000490638 SMAD5-AS1Q9Y6J3 95 aa11.12□□□□□ -0.63
ARHGEF39-205ENST00000490638 USP24Q9UPU5 2620 aa11.12□□□□□ -0.63
ARHGEF39-205ENST00000490638 SPXQ9BT56 116 aa11.11□□□□□ -0.63
ARHGEF39-205ENST00000490638 UQCR10Q9UDW1 63 aa11.11□□□□□ -0.63
ARHGEF39-205ENST00000490638 PCP4P48539 62 aa11.11□□□□□ -0.63
ARHGEF39-205ENST00000490638 C1orf229Q6ZS94 237 aaPredicted RBP11.11□□□□□ -0.63
ARHGEF39-205ENST00000490638 NOP10Q9NPE3 64 aaKnown RBP11.11□□□□□ -0.63
ARHGEF39-205ENST00000490638 TRAV13-1A0A0B4J241 112 aa11.11□□□□□ -0.63
ARHGEF39-205ENST00000490638 INSL3P51460 131 aa11.11□□□□□ -0.63
ARHGEF39-205ENST00000490638 BRWD1-AS2P59051 145 aa11.11□□□□□ -0.63
ARHGEF39-205ENST00000490638 DNLZQ5SXM8 178 aa11.11□□□□□ -0.63
ARHGEF39-205ENST00000490638 MORN5Q5VZ52 161 aa11.11□□□□□ -0.63
ARHGEF39-205ENST00000490638 ZNRF2Q8NHG8 242 aa11.11□□□□□ -0.63
ARHGEF39-205ENST00000490638 ZC2HC1AQ96GY0 325 aa11.11□□□□□ -0.63
ARHGEF39-205ENST00000490638 MRPL16Q9NX20 251 aaKnown RBP11.11□□□□□ -0.63
ARHGEF39-205ENST00000490638 HINT1P49773 126 aaPredicted RBP11.11□□□□□ -0.63
ARHGEF39-205ENST00000490638 DMRTA1Q5VZB9 504 aa11.11□□□□□ -0.63
ARHGEF39-205ENST00000490638 TRPT1Q86TN4 253 aaKnown RBP11.11□□□□□ -0.63
ARHGEF39-205ENST00000490638 LENEPQ9Y5L5 61 aa11.11□□□□□ -0.63
ARHGEF39-205ENST00000490638 A0A0U1RRA0 63 aa11.1□□□□□ -0.63
ARHGEF39-205ENST00000490638 FAM231BA6NCW3 169 aa11.1□□□□□ -0.63
ARHGEF39-205ENST00000490638 HIST1H2BKO60814 126 aa11.1□□□□□ -0.63
ARHGEF39-205ENST00000490638 HIST1H2BJP06899 126 aa11.1□□□□□ -0.63
ARHGEF39-205ENST00000490638 HIST1H2BOP23527 126 aa11.1□□□□□ -0.63
ARHGEF39-205ENST00000490638 HIST1H2BBP33778 126 aa11.1□□□□□ -0.63
ARHGEF39-205ENST00000490638 HIST1H2BDP58876 126 aa11.1□□□□□ -0.63
ARHGEF39-205ENST00000490638 HIST1H2BCP62807 126 aa11.1□□□□□ -0.63
ARHGEF39-205ENST00000490638 EBI3Q14213 229 aa11.1□□□□□ -0.63
ARHGEF39-205ENST00000490638 HIST2H2BEQ16778 126 aa11.1□□□□□ -0.63
ARHGEF39-205ENST00000490638 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.1□□□□□ -0.63
ARHGEF39-205ENST00000490638 OR2K2Q8NGT1 345 aa11.1□□□□□ -0.63
ARHGEF39-205ENST00000490638 HIST1H2BHQ93079 126 aa11.1□□□□□ -0.63
ARHGEF39-205ENST00000490638 HIST1H2BNQ99877 126 aa11.1□□□□□ -0.63
ARHGEF39-205ENST00000490638 HIST1H2BMQ99879 126 aa11.1□□□□□ -0.63
ARHGEF39-205ENST00000490638 SNAI2O43623 268 aa11.1□□□□□ -0.63
ARHGEF39-205ENST00000490638 JOSD1Q15040 202 aaPredicted RBP11.1□□□□□ -0.63
ARHGEF39-205ENST00000490638 AVPP01185 164 aa11.1□□□□□ -0.63
ARHGEF39-205ENST00000490638 PLP1P60201 277 aa11.1□□□□□ -0.63
ARHGEF39-205ENST00000490638 PYY3Q5JQD4 70 aa11.1□□□□□ -0.63
ARHGEF39-205ENST00000490638 TMEM256Q8N2U0 113 aa11.1□□□□□ -0.63
ARHGEF39-205ENST00000490638 MRPL53Q96EL3 112 aaKnown RBP11.1□□□□□ -0.63
ARHGEF39-205ENST00000490638 KMT2EQ8IZD2 1858 aa11.1□□□□□ -0.63
ARHGEF39-205ENST00000490638 TRAV25A0A0B4J276 109 aa11.09□□□□□ -0.63
ARHGEF39-205ENST00000490638 GFRA4Q9GZZ7 299 aa11.09□□□□□ -0.63
ARHGEF39-205ENST00000490638 MGAM2Q2M2H8 2515 aa11.09□□□□□ -0.63
ARHGEF39-205ENST00000490638 ERASQ7Z444 233 aa11.09□□□□□ -0.63
ARHGEF39-205ENST00000490638 C11orf52Q96A22 123 aa11.09□□□□□ -0.63
ARHGEF39-205ENST00000490638 PAX4O43316 350 aa11.09□□□□□ -0.63
ARHGEF39-205ENST00000490638 CT83Q5H943 113 aa11.09□□□□□ -0.63
ARHGEF39-205ENST00000490638 TEX43Q6ZNM6 134 aa11.09□□□□□ -0.63
ARHGEF39-205ENST00000490638 IGF2BP2-AS1Q96M15 143 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms