RNA–Protein interactions for RNA: ENST00000490504.5

PCCB-218, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 3 BASIC

Gene PCCB, Length 1,613 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-218ENST00000490504 TMEM136Q6ZRR5 245 aa11.61□□□□□ -0.55
PCCB-218ENST00000490504 PGLYRP4Q96LB8 373 aa11.61□□□□□ -0.55
PCCB-218ENST00000490504 NBEAL2Q6ZNJ1 2754 aa11.61□□□□□ -0.55
PCCB-218ENST00000490504 A8MZ25 164 aa11.6□□□□□ -0.55
PCCB-218ENST00000490504 UBE2CO00762 179 aa11.6□□□□□ -0.55
PCCB-218ENST00000490504 HLA-DQA1P01909 254 aa11.6□□□□□ -0.55
PCCB-218ENST00000490504 TFPI2P48307 235 aa11.6□□□□□ -0.55
PCCB-218ENST00000490504 NDUFA6P56556 154 aa11.6□□□□□ -0.55
PCCB-218ENST00000490504 RPS20P60866 119 aaKnown RBP11.6□□□□□ -0.55
PCCB-218ENST00000490504 HIST1H1AQ02539 215 aaPredicted RBP11.6□□□□□ -0.55
PCCB-218ENST00000490504 Q6AWC8 147 aa11.6□□□□□ -0.55
PCCB-218ENST00000490504 OR2K2Q8NGT1 345 aa11.6□□□□□ -0.55
PCCB-218ENST00000490504 RCHY1Q96PM5 261 aa11.6□□□□□ -0.55
PCCB-218ENST00000490504 A0A1B0GXF2 115 aa11.6□□□□□ -0.55
PCCB-218ENST00000490504 RAB4BP61018 213 aa11.6□□□□□ -0.55
PCCB-218ENST00000490504 DEFB114Q30KQ6 69 aa11.6□□□□□ -0.55
PCCB-218ENST00000490504 TRBV7-9A0A0J9YWB2 115 aa11.59□□□□□ -0.55
PCCB-218ENST00000490504 ZNF688P0C7X2 276 aa11.59□□□□□ -0.55
PCCB-218ENST00000490504 DEFB1P60022 68 aa11.59□□□□□ -0.55
PCCB-218ENST00000490504 HBBP68871 147 aa11.59□□□□□ -0.55
PCCB-218ENST00000490504 GTSCR1Q86UQ5 136 aa11.59□□□□□ -0.55
PCCB-218ENST00000490504 DYNLRB2Q8TF09 96 aa11.59□□□□□ -0.55
PCCB-218ENST00000490504 RYR3Q15413 4870 aa11.59□□□□□ -0.55
PCCB-218ENST00000490504 TMSB15BA0A087X1C1 80 aa11.58□□□□□ -0.56
PCCB-218ENST00000490504 TRAV2A0A0B4J234 112 aa11.58□□□□□ -0.56
PCCB-218ENST00000490504 F6UB75 175 aa11.58□□□□□ -0.56
PCCB-218ENST00000490504 LINC01559Q495D7 138 aa11.58□□□□□ -0.56
PCCB-218ENST00000490504 PSMG4Q5JS54 123 aa11.58□□□□□ -0.56
PCCB-218ENST00000490504 FAM19A4Q96LR4 140 aa11.58□□□□□ -0.56
PCCB-218ENST00000490504 ORM1P02763 201 aa11.57□□□□□ -0.56
PCCB-218ENST00000490504 HOXA5P20719 270 aa11.57□□□□□ -0.56
PCCB-218ENST00000490504 TM2D3Q9BRN9 247 aa11.57□□□□□ -0.56
PCCB-218ENST00000490504 ZMAT4Q9H898 229 aa11.57□□□□□ -0.56
PCCB-218ENST00000490504 A0A1B0GUT8 65 aa11.57□□□□□ -0.56
PCCB-218ENST00000490504 CAMPP49913 170 aa11.57□□□□□ -0.56
PCCB-218ENST00000490504 ZFAND2AQ8N6M9 145 aa11.57□□□□□ -0.56
PCCB-218ENST00000490504 APCSP02743 223 aa11.56□□□□□ -0.56
PCCB-218ENST00000490504 CD7P09564 240 aa11.56□□□□□ -0.56
PCCB-218ENST00000490504 CRISP2P16562 243 aa11.56□□□□□ -0.56
PCCB-218ENST00000490504 RIGQ13278 110 aa11.56□□□□□ -0.56
PCCB-218ENST00000490504 PRR9Q5T870 116 aa11.56□□□□□ -0.56
PCCB-218ENST00000490504 GDF5OSQ5U4N7 250 aa11.56□□□□□ -0.56
PCCB-218ENST00000490504 BORCS7Q96B45 105 aa11.56□□□□□ -0.56
PCCB-218ENST00000490504 A0A1B0GW15 77 aa11.55□□□□□ -0.56
PCCB-218ENST00000490504 COA6Q5JTJ3 125 aaKnown RBP11.55□□□□□ -0.56
PCCB-218ENST00000490504 APRG1Q8IVJ8 170 aa11.55□□□□□ -0.56
PCCB-218ENST00000490504 TMEM61Q8N0U2 210 aa11.55□□□□□ -0.56
PCCB-218ENST00000490504 TPPP3Q9BW30 176 aa11.55□□□□□ -0.56
PCCB-218ENST00000490504 A0A0J9YX75 114 aa11.54□□□□□ -0.56
PCCB-218ENST00000490504 S100A8P05109 93 aa11.54□□□□□ -0.56
PCCB-218ENST00000490504 ARMS2P0C7Q2 107 aa11.54□□□□□ -0.56
PCCB-218ENST00000490504 CTRLP40313 264 aa11.54□□□□□ -0.56
PCCB-218ENST00000490504 EBLN2Q6P2I7 272 aa11.54□□□□□ -0.56
PCCB-218ENST00000490504 FER1L6-AS1Q8NA97 138 aa11.54□□□□□ -0.56
PCCB-218ENST00000490504 ODF3Q96PU9 254 aa11.54□□□□□ -0.56
PCCB-218ENST00000490504 WFDC10AQ9H1F0 79 aa11.54□□□□□ -0.56
PCCB-218ENST00000490504 DYNC2H1Q8NCM8 4307 aaKnown RBP11.54□□□□□ -0.56
PCCB-218ENST00000490504 TRAV21A0A0B4J279 112 aa11.53□□□□□ -0.56
PCCB-218ENST00000490504 GPX1P07203 203 aa11.53□□□□□ -0.56
PCCB-218ENST00000490504 IGLC6P0CF74 106 aa11.53□□□□□ -0.56
PCCB-218ENST00000490504 SLAQ13239 276 aa11.53□□□□□ -0.56
PCCB-218ENST00000490504 LYZL1Q6UWQ5 148 aa11.53□□□□□ -0.56
PCCB-218ENST00000490504 FOXI2Q6ZQN5 318 aa11.53□□□□□ -0.56
PCCB-218ENST00000490504 ZNF575Q86XF7 245 aa11.53□□□□□ -0.56
PCCB-218ENST00000490504 DEFB125Q8N687 156 aa11.53□□□□□ -0.56
PCCB-218ENST00000490504 C11orf21Q9P2W6 132 aa11.53□□□□□ -0.56
PCCB-218ENST00000490504 TRAV25A0A0B4J276 109 aa11.53□□□□□ -0.56
PCCB-218ENST00000490504 IGKV3D-20A0A0C4DH25 116 aa11.53□□□□□ -0.56
PCCB-218ENST00000490504 DUSP14O95147 198 aaKnown RBP11.53□□□□□ -0.56
PCCB-218ENST00000490504 LEPP41159 167 aa11.53□□□□□ -0.56
PCCB-218ENST00000490504 C3orf84H3BNL1 204 aa11.52□□□□□ -0.57
PCCB-218ENST00000490504 J3KRW8 73 aa11.52□□□□□ -0.57
PCCB-218ENST00000490504 AKR1D1P51857 326 aa11.52□□□□□ -0.57
PCCB-218ENST00000490504 KIAA1644Q3SXP7 199 aa11.52□□□□□ -0.57
PCCB-218ENST00000490504 GFI1BQ5VTD9 330 aa11.52□□□□□ -0.57
PCCB-218ENST00000490504 HIST3H2BBQ8N257 126 aa11.52□□□□□ -0.57
PCCB-218ENST00000490504 GATD1Q8NB37 220 aa11.52□□□□□ -0.57
PCCB-218ENST00000490504 MUC7Q8TAX7 377 aa11.52□□□□□ -0.57
PCCB-218ENST00000490504 SPAG8Q99932 426 aaPredicted RBP11.52□□□□□ -0.57
PCCB-218ENST00000490504 SSBP4Q9BWG4 385 aaPredicted RBP11.52□□□□□ -0.57
PCCB-218ENST00000490504 GRIFINA4D1Z8 144 aa11.51□□□□□ -0.57
PCCB-218ENST00000490504 OR4C46A6NHA9 309 aa11.51□□□□□ -0.57
PCCB-218ENST00000490504 KLLNB2CW77 178 aa11.51□□□□□ -0.57
PCCB-218ENST00000490504 OR11H12B2RN74 326 aa11.51□□□□□ -0.57
PCCB-218ENST00000490504 RNASE4P34096 147 aaKnown RBP11.51□□□□□ -0.57
PCCB-218ENST00000490504 SPATA25Q9BR10 227 aa11.51□□□□□ -0.57
PCCB-218ENST00000490504 RBMY1BA6NDE4 496 aaKnown RBP11.5□□□□□ -0.57
PCCB-218ENST00000490504 RBMY1EA6NEQ0 496 aaKnown RBP11.5□□□□□ -0.57
PCCB-218ENST00000490504 F2Z2F3 143 aa11.5□□□□□ -0.57
PCCB-218ENST00000490504 RBMY1DP0C7P1 496 aaKnown RBP11.5□□□□□ -0.57
PCCB-218ENST00000490504 SRIP30626 198 aa11.49□□□□□ -0.57
PCCB-218ENST00000490504 DEFB131AP59861 70 aa11.49□□□□□ -0.57
PCCB-218ENST00000490504 Q0VG73 95 aa11.49□□□□□ -0.57
PCCB-218ENST00000490504 Q6ZQT7 251 aa11.49□□□□□ -0.57
PCCB-218ENST00000490504 CNFNQ9BYD5 112 aa11.49□□□□□ -0.57
PCCB-218ENST00000490504 RETNQ9HD89 108 aa11.49□□□□□ -0.57
PCCB-218ENST00000490504 AGRNO00468 2067 aa11.49□□□□□ -0.57
PCCB-218ENST00000490504 IFITM10A6NMD0 228 aa11.49□□□□□ -0.57
PCCB-218ENST00000490504 S100A2P29034 98 aa11.49□□□□□ -0.57
PCCB-218ENST00000490504 TSPOP30536 169 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms