RNA–Protein interactions for RNA: ENST00000490348.1

SRGAP3-208, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 2

Gene SRGAP3, Length 1,554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-208ENST00000490348 NAGKQ9UJ70 344 aa10.19□□□□□ -0.78
SRGAP3-208ENST00000490348 TRAV10A0A0B4J240 114 aa10.18□□□□□ -0.78
SRGAP3-208ENST00000490348 TCL1AP56279 114 aa10.18□□□□□ -0.78
SRGAP3-208ENST00000490348 DAD1P61803 113 aa10.18□□□□□ -0.78
SRGAP3-208ENST00000490348 UBE2G1P62253 170 aa10.18□□□□□ -0.78
SRGAP3-208ENST00000490348 BLOC1S1P78537 153 aa10.18□□□□□ -0.78
SRGAP3-208ENST00000490348 MEF2BQ02080 365 aaPredicted RBP10.18□□□□□ -0.78
SRGAP3-208ENST00000490348 IBA57Q5T440 356 aaKnown RBP10.18□□□□□ -0.78
SRGAP3-208ENST00000490348 LINC00612Q8N6U2 182 aa10.18□□□□□ -0.78
SRGAP3-208ENST00000490348 ZFP30Q9Y2G7 519 aa10.18□□□□□ -0.78
SRGAP3-208ENST00000490348 DEFB131BA0A096LNP1 70 aa10.18□□□□□ -0.78
SRGAP3-208ENST00000490348 GNRH2O43555 120 aa10.18□□□□□ -0.78
SRGAP3-208ENST00000490348 FAM159AQ6UWV7 190 aa10.18□□□□□ -0.78
SRGAP3-208ENST00000490348 Q6ZTI0 123 aa10.18□□□□□ -0.78
SRGAP3-208ENST00000490348 TMEM183AQ8IXX5 376 aa10.18□□□□□ -0.78
SRGAP3-208ENST00000490348 NHLRC2Q8NBF2 726 aa10.18□□□□□ -0.78
SRGAP3-208ENST00000490348 SNURFLB1AK76 121 aa10.17□□□□□ -0.78
SRGAP3-208ENST00000490348 TYMSP04818 313 aa10.17□□□□□ -0.78
SRGAP3-208ENST00000490348 RPL35P42766 123 aaKnown RBP10.17□□□□□ -0.78
SRGAP3-208ENST00000490348 CLLU1Q5K131 121 aa10.17□□□□□ -0.78
SRGAP3-208ENST00000490348 TXNDC17Q9BRA2 123 aa10.17□□□□□ -0.78
SRGAP3-208ENST00000490348 VAX2Q9UIW0 290 aa10.17□□□□□ -0.78
SRGAP3-208ENST00000490348 IGHV3-16A0A0C4DH30 117 aa10.16□□□□□ -0.78
SRGAP3-208ENST00000490348 SPINK4O60575 86 aa10.16□□□□□ -0.78
SRGAP3-208ENST00000490348 IFNA1P01562 189 aa10.16□□□□□ -0.78
SRGAP3-208ENST00000490348 RAB14P61106 215 aa10.16□□□□□ -0.78
SRGAP3-208ENST00000490348 ZNF575Q86XF7 245 aa10.16□□□□□ -0.78
SRGAP3-208ENST00000490348 PCNPQ8WW12 178 aaKnown RBP10.16□□□□□ -0.78
SRGAP3-208ENST00000490348 MLST8Q9BVC4 326 aa10.16□□□□□ -0.78
SRGAP3-208ENST00000490348 KLK5Q9Y337 293 aaPredicted RBP10.16□□□□□ -0.78
SRGAP3-208ENST00000490348 IGKV3D-20A0A0C4DH25 116 aa10.15□□□□□ -0.78
SRGAP3-208ENST00000490348 GAGE12BA1L429 117 aa10.15□□□□□ -0.78
SRGAP3-208ENST00000490348 GAGE7O76087 117 aa10.15□□□□□ -0.78
SRGAP3-208ENST00000490348 GAGE12FP0CL80 117 aa10.15□□□□□ -0.78
SRGAP3-208ENST00000490348 GAGE12GP0CL81 117 aa10.15□□□□□ -0.78
SRGAP3-208ENST00000490348 GAGE12IP0CL82 117 aa10.15□□□□□ -0.78
SRGAP3-208ENST00000490348 TRGV11A0A075B6L2 103 aa10.14□□□□□ -0.79
SRGAP3-208ENST00000490348 IGLL5B9A064 214 aa10.14□□□□□ -0.79
SRGAP3-208ENST00000490348 PDE6DO43924 150 aa10.14□□□□□ -0.79
SRGAP3-208ENST00000490348 S100A9P06702 114 aaKnown RBP10.14□□□□□ -0.79
SRGAP3-208ENST00000490348 HTN3P15516 51 aa10.14□□□□□ -0.79
SRGAP3-208ENST00000490348 ZNF415Q09FC8 603 aa10.14□□□□□ -0.79
SRGAP3-208ENST00000490348 ZNF674Q2M3X9 581 aa10.14□□□□□ -0.79
SRGAP3-208ENST00000490348 SDF2L1Q9HCN8 221 aa10.14□□□□□ -0.79
SRGAP3-208ENST00000490348 TRBV20OR9-2A0A075B6H5 130 aa10.14□□□□□ -0.79
SRGAP3-208ENST00000490348 TRGV1A0A0A0MS02 117 aa10.14□□□□□ -0.79
SRGAP3-208ENST00000490348 RBFOX3A6NFN3 312 aa10.14□□□□□ -0.79
SRGAP3-208ENST00000490348 FABP5P3A8MUU1 101 aa10.14□□□□□ -0.79
SRGAP3-208ENST00000490348 SH2D1AO60880 128 aa10.14□□□□□ -0.79
SRGAP3-208ENST00000490348 FAM162BQ5T6X4 162 aa10.14□□□□□ -0.79
SRGAP3-208ENST00000490348 BAGE2Q86Y30 109 aa10.14□□□□□ -0.79
SRGAP3-208ENST00000490348 KCNS1Q96KK3 526 aa10.14□□□□□ -0.79
SRGAP3-208ENST00000490348 MRPL16Q9NX20 251 aaKnown RBP10.14□□□□□ -0.79
SRGAP3-208ENST00000490348 IGHV4-4A0A075B6R2 117 aa10.13□□□□□ -0.79
SRGAP3-208ENST00000490348 RAB19A4D1S5 217 aa10.13□□□□□ -0.79
SRGAP3-208ENST00000490348 IGLV2-8P01709 118 aa10.13□□□□□ -0.79
SRGAP3-208ENST00000490348 TAGLN2P37802 199 aaKnown RBP10.13□□□□□ -0.79
SRGAP3-208ENST00000490348 CENPWQ5EE01 88 aa10.13□□□□□ -0.79
SRGAP3-208ENST00000490348 ZNF506Q5JVG8 444 aa10.13□□□□□ -0.79
SRGAP3-208ENST00000490348 APLNQ9ULZ1 77 aa10.13□□□□□ -0.79
SRGAP3-208ENST00000490348 MUC4Q99102 2169 aa10.12□□□□□ -0.79
SRGAP3-208ENST00000490348 HOXA5P20719 270 aa10.12□□□□□ -0.79
SRGAP3-208ENST00000490348 LGALS9BQ3B8N2 356 aa10.12□□□□□ -0.79
SRGAP3-208ENST00000490348 C18orf15Q96N68 181 aa10.12□□□□□ -0.79
SRGAP3-208ENST00000490348 MED9Q9NWA0 146 aa10.12□□□□□ -0.79
SRGAP3-208ENST00000490348 KRBOX1C9JBD0 128 aa10.11□□□□□ -0.79
SRGAP3-208ENST00000490348 ATP5G1P05496 136 aa10.11□□□□□ -0.79
SRGAP3-208ENST00000490348 RNASE3P12724 160 aaKnown RBP10.11□□□□□ -0.79
SRGAP3-208ENST00000490348 TOR2AQ5JU69 321 aa10.11□□□□□ -0.79
SRGAP3-208ENST00000490348 LCE6AA0A183 80 aa10.1□□□□□ -0.79
SRGAP3-208ENST00000490348 PGPEP1LA6NFU8 196 aa10.1□□□□□ -0.79
SRGAP3-208ENST00000490348 M0R036 132 aa10.1□□□□□ -0.79
SRGAP3-208ENST00000490348 ORM1P02763 201 aa10.1□□□□□ -0.79
SRGAP3-208ENST00000490348 TMEM88Q6PEY1 159 aa10.1□□□□□ -0.79
SRGAP3-208ENST00000490348 RASL10AQ92737 203 aa10.1□□□□□ -0.79
SRGAP3-208ENST00000490348 C9orf85Q96MD7 179 aa10.1□□□□□ -0.79
SRGAP3-208ENST00000490348 SPXQ9BT56 116 aa10.1□□□□□ -0.79
SRGAP3-208ENST00000490348 DNAH6Q9C0G6 4158 aa10.1□□□□□ -0.79
SRGAP3-208ENST00000490348 TRGV2A0A075B6R0 118 aa10.09□□□□□ -0.79
SRGAP3-208ENST00000490348 B4DEV8 164 aa10.09□□□□□ -0.79
SRGAP3-208ENST00000490348 F5H768 121 aa10.09□□□□□ -0.79
SRGAP3-208ENST00000490348 LINC01559Q495D7 138 aa10.09□□□□□ -0.79
SRGAP3-208ENST00000490348 COMMD7Q86VX2 200 aa10.09□□□□□ -0.79
SRGAP3-208ENST00000490348 M0R2P5 195 aa10.09□□□□□ -0.79
SRGAP3-208ENST00000490348 GNG4P50150 75 aa10.09□□□□□ -0.79
SRGAP3-208ENST00000490348 POM121L12Q8N7R1 296 aa10.09□□□□□ -0.79
SRGAP3-208ENST00000490348 LINC00476Q8WZB0 136 aa10.09□□□□□ -0.79
SRGAP3-208ENST00000490348 TMSB15BA0A087X1C1 80 aa10.08□□□□□ -0.8
SRGAP3-208ENST00000490348 TMEM250H0YL14 139 aa10.08□□□□□ -0.8
SRGAP3-208ENST00000490348 TCTAP57738 103 aa10.08□□□□□ -0.8
SRGAP3-208ENST00000490348 RPL19P84098 196 aaKnown RBP10.08□□□□□ -0.8
SRGAP3-208ENST00000490348 PRR27Q6MZM9 219 aa10.08□□□□□ -0.8
SRGAP3-208ENST00000490348 FAM210BQ96KR6 192 aa10.08□□□□□ -0.8
SRGAP3-208ENST00000490348 NDUFAF3Q9BU61 184 aa10.08□□□□□ -0.8
SRGAP3-208ENST00000490348 EIF5A2Q9GZV4 153 aaKnown RBP10.08□□□□□ -0.8
SRGAP3-208ENST00000490348 PARLQ9H300 379 aa10.08□□□□□ -0.8
SRGAP3-208ENST00000490348 GRIFINA4D1Z8 144 aa10.07□□□□□ -0.8
SRGAP3-208ENST00000490348 IGHV3-53P01767 116 aa10.07□□□□□ -0.8
SRGAP3-208ENST00000490348 SRSF3P84103 164 aaKnown RBP10.07□□□□□ -0.8
SRGAP3-208ENST00000490348 DNLZQ5SXM8 178 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms