RNA–Protein interactions for RNA: ENST00000490193.5

USP39-216, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 1,028 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-216ENST00000490193 LOC105371267A0A1B0GV96 52 aa5.41□□□□□ -1.54
USP39-216ENST00000490193 RBAKDNA6NC62 111 aa5.41□□□□□ -1.54
USP39-216ENST00000490193 NAP1L6A6NFF2 107 aa5.41□□□□□ -1.54
USP39-216ENST00000490193 H3BMQ9 156 aa5.41□□□□□ -1.54
USP39-216ENST00000490193 L7N2F9 121 aa5.41□□□□□ -1.54
USP39-216ENST00000490193 GATA1P15976 413 aaPredicted RBP5.41□□□□□ -1.54
USP39-216ENST00000490193 PPT1P50897 306 aa5.41□□□□□ -1.54
USP39-216ENST00000490193 SSTP61278 116 aa5.41□□□□□ -1.54
USP39-216ENST00000490193 ASAH1Q13510 395 aa5.41□□□□□ -1.54
USP39-216ENST00000490193 ZNF674Q2M3X9 581 aa5.41□□□□□ -1.54
USP39-216ENST00000490193 MUC21Q5SSG8 566 aa5.41□□□□□ -1.54
USP39-216ENST00000490193 FAM122CQ6P4D5 195 aa5.41□□□□□ -1.54
USP39-216ENST00000490193 SCXQ7RTU7 201 aa5.41□□□□□ -1.54
USP39-216ENST00000490193 OR4C5Q8NGB2 326 aa5.41□□□□□ -1.54
USP39-216ENST00000490193 MITD1Q8WV92 249 aa5.41□□□□□ -1.54
USP39-216ENST00000490193 FAM167A-AS1Q96KT0 104 aa5.41□□□□□ -1.54
USP39-216ENST00000490193 FLVCR2Q9UPI3 526 aa5.41□□□□□ -1.54
USP39-216ENST00000490193 LENEPQ9Y5L5 61 aa5.41□□□□□ -1.54
USP39-216ENST00000490193 RNF213Q63HN8 5207 aa5.4□□□□□ -1.54
USP39-216ENST00000490193 M0R2P5 195 aa5.4□□□□□ -1.54
USP39-216ENST00000490193 CST7O76096 145 aa5.4□□□□□ -1.54
USP39-216ENST00000490193 PFN1P07737 140 aaKnown RBP5.4□□□□□ -1.54
USP39-216ENST00000490193 NBEAP1P0C6P0 100 aa5.4□□□□□ -1.54
USP39-216ENST00000490193 VAMP2P63027 116 aa5.4□□□□□ -1.54
USP39-216ENST00000490193 BAK1Q16611 211 aa5.4□□□□□ -1.54
USP39-216ENST00000490193 TMEM183BQ1AE95 376 aa5.4□□□□□ -1.54
USP39-216ENST00000490193 LELP1Q5T871 98 aa5.4□□□□□ -1.54
USP39-216ENST00000490193 FAM159AQ6UWV7 190 aa5.4□□□□□ -1.54
USP39-216ENST00000490193 TMEM183AQ8IXX5 376 aa5.4□□□□□ -1.54
USP39-216ENST00000490193 NHLRC2Q8NBF2 726 aa5.4□□□□□ -1.54
USP39-216ENST00000490193 Q8TAT8 98 aa5.4□□□□□ -1.54
USP39-216ENST00000490193 CHAC1Q9BUX1 264 aa5.4□□□□□ -1.54
USP39-216ENST00000490193 SLC25A2Q9BXI2 301 aa5.4□□□□□ -1.54
USP39-216ENST00000490193 GSKIPQ9P0R6 139 aa5.4□□□□□ -1.54
USP39-216ENST00000490193 UBE2L5PA0A1B0GUS4 154 aa5.39□□□□□ -1.55
USP39-216ENST00000490193 CIDEAO60543 219 aa5.39□□□□□ -1.55
USP39-216ENST00000490193 S100A11P31949 105 aa5.39□□□□□ -1.55
USP39-216ENST00000490193 SULT1A1P50225 295 aa5.39□□□□□ -1.55
USP39-216ENST00000490193 CAV2P51636 162 aa5.39□□□□□ -1.55
USP39-216ENST00000490193 BAXQ07812 192 aa5.39□□□□□ -1.55
USP39-216ENST00000490193 OR10J3Q5JRS4 329 aa5.39□□□□□ -1.55
USP39-216ENST00000490193 TMED6Q8WW62 240 aa5.39□□□□□ -1.55
USP39-216ENST00000490193 GPN1Q9HCN4 374 aaPredicted RBP5.39□□□□□ -1.55
USP39-216ENST00000490193 MBD2Q9UBB5 411 aa5.39□□□□□ -1.55
USP39-216ENST00000490193 TRAV8-3A0A0A6YYJ7 113 aa5.38□□□□□ -1.55
USP39-216ENST00000490193 IGHV3-16A0A0C4DH30 117 aa5.38□□□□□ -1.55
USP39-216ENST00000490193 TRBV6-4A0A1B0GX49 114 aa5.38□□□□□ -1.55
USP39-216ENST00000490193 FAM24AA6NFZ4 105 aa5.38□□□□□ -1.55
USP39-216ENST00000490193 NOL3O60936 208 aaKnown RBP5.38□□□□□ -1.55
USP39-216ENST00000490193 IGLV2-8P01709 118 aa5.38□□□□□ -1.55
USP39-216ENST00000490193 IGHV3-30P01768 117 aa5.38□□□□□ -1.55
USP39-216ENST00000490193 IGHV3-33P01772 117 aa5.38□□□□□ -1.55
USP39-216ENST00000490193 IGHV3-30-3P0DP02 117 aa5.38□□□□□ -1.55
USP39-216ENST00000490193 IGHV3-30-5P0DP03 117 aa5.38□□□□□ -1.55
USP39-216ENST00000490193 FGF7P21781 194 aa5.38□□□□□ -1.55
USP39-216ENST00000490193 BTCP35070 178 aa5.38□□□□□ -1.55
USP39-216ENST00000490193 BCAP31P51572 246 aa5.38□□□□□ -1.55
USP39-216ENST00000490193 HBG1P69891 147 aa5.38□□□□□ -1.55
USP39-216ENST00000490193 HBG2P69892 147 aa5.38□□□□□ -1.55
USP39-216ENST00000490193 COTL1Q14019 142 aa5.38□□□□□ -1.55
USP39-216ENST00000490193 RHOHQ15669 191 aa5.38□□□□□ -1.55
USP39-216ENST00000490193 ATP6V1FQ16864 119 aa5.38□□□□□ -1.55
USP39-216ENST00000490193 CNPY1Q3B7I2 92 aa5.38□□□□□ -1.55
USP39-216ENST00000490193 GCSAMLQ5JQS6 135 aa5.38□□□□□ -1.55
USP39-216ENST00000490193 SLC25A29Q8N8R3 303 aa5.38□□□□□ -1.55
USP39-216ENST00000490193 FXYD5Q96DB9 178 aa5.38□□□□□ -1.55
USP39-216ENST00000490193 PHYHIPLQ96FC7 376 aa5.38□□□□□ -1.55
USP39-216ENST00000490193 OR51M1Q9H341 326 aa5.38□□□□□ -1.55
USP39-216ENST00000490193 LYRM2Q9NU23 88 aaPredicted RBP5.38□□□□□ -1.55
USP39-216ENST00000490193 CBY1Q9Y3M2 126 aa5.38□□□□□ -1.55
USP39-216ENST00000490193 LSM5Q9Y4Y9 91 aaKnown RBP5.38□□□□□ -1.55
USP39-216ENST00000490193 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.37□□□□□ -1.55
USP39-216ENST00000490193 IGSF23A1L1A6 192 aa5.37□□□□□ -1.55
USP39-216ENST00000490193 FBLL1A6NHQ2 334 aaKnown RBP5.37□□□□□ -1.55
USP39-216ENST00000490193 CCSO14618 274 aa5.37□□□□□ -1.55
USP39-216ENST00000490193 PVALBP20472 110 aaPredicted RBP5.37□□□□□ -1.55
USP39-216ENST00000490193 S100A1P23297 94 aa5.37□□□□□ -1.55
USP39-216ENST00000490193 CSN1S1P47710 185 aa5.37□□□□□ -1.55
USP39-216ENST00000490193 ACOT6Q3I5F7 207 aaPredicted RBP5.37□□□□□ -1.55
USP39-216ENST00000490193 MIR17HGQ75NE6 70 aa5.37□□□□□ -1.55
USP39-216ENST00000490193 STX12Q86Y82 276 aa5.37□□□□□ -1.55
USP39-216ENST00000490193 TMEM252Q8N6L7 170 aa5.37□□□□□ -1.55
USP39-216ENST00000490193 CIRBP-AS1Q8TBR5 109 aa5.37□□□□□ -1.55
USP39-216ENST00000490193 PRADC1Q9BSG0 188 aa5.37□□□□□ -1.55
USP39-216ENST00000490193 PAXXQ9BUH6 204 aa5.37□□□□□ -1.55
USP39-216ENST00000490193 NPCDR1Q9BY65 106 aa5.37□□□□□ -1.55
USP39-216ENST00000490193 GTSF1LQ9H1H1 148 aa5.37□□□□□ -1.55
USP39-216ENST00000490193 BATF3Q9NR55 127 aa5.37□□□□□ -1.55
USP39-216ENST00000490193 COX11Q9Y6N1 276 aa5.37□□□□□ -1.55
USP39-216ENST00000490193 RNF222A6NCQ9 220 aa5.36□□□□□ -1.55
USP39-216ENST00000490193 DIRC3C9JPN6 131 aa5.36□□□□□ -1.55
USP39-216ENST00000490193 LECT2O14960 151 aa5.36□□□□□ -1.55
USP39-216ENST00000490193 RS1O15537 224 aa5.36□□□□□ -1.55
USP39-216ENST00000490193 GNRH2O43555 120 aa5.36□□□□□ -1.55
USP39-216ENST00000490193 TYMSP04818 313 aa5.36□□□□□ -1.55
USP39-216ENST00000490193 OR10J4P0C629 311 aa5.36□□□□□ -1.55
USP39-216ENST00000490193 IL15RAQ13261 267 aa5.36□□□□□ -1.55
USP39-216ENST00000490193 LINC01620Q4KN68 170 aa5.36□□□□□ -1.55
USP39-216ENST00000490193 TOR2AQ5JU69 321 aa5.36□□□□□ -1.55
USP39-216ENST00000490193 ATP6V0E2Q8NHE4 81 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms