RNA–Protein interactions for RNA: ENST00000490062.1

ERCC3-207, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 4

Gene ERCC3, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-207ENST00000490062 DYNC2H1Q8NCM8 4307 aaKnown RBP12.41□□□□□ -0.42
ERCC3-207ENST00000490062 ZNF415Q09FC8 603 aa12.4□□□□□ -0.42
ERCC3-207ENST00000490062 LGALS9BQ3B8N2 356 aa12.4□□□□□ -0.42
ERCC3-207ENST00000490062 MUC21Q5SSG8 566 aa12.4□□□□□ -0.42
ERCC3-207ENST00000490062 FAM162BQ5T6X4 162 aa12.4□□□□□ -0.42
ERCC3-207ENST00000490062 CEMP1Q6PRD7 247 aaPredicted RBP12.4□□□□□ -0.42
ERCC3-207ENST00000490062 Q6ZTC4 211 aa12.4□□□□□ -0.42
ERCC3-207ENST00000490062 PHLDA1Q8WV24 401 aaPredicted RBP12.4□□□□□ -0.42
ERCC3-207ENST00000490062 SDF2L1Q9HCN8 221 aa12.4□□□□□ -0.42
ERCC3-207ENST00000490062 NOP10Q9NPE3 64 aaKnown RBP12.4□□□□□ -0.42
ERCC3-207ENST00000490062 GSN-AS1Q9NRJ2 163 aa12.4□□□□□ -0.42
ERCC3-207ENST00000490062 MED9Q9NWA0 146 aa12.4□□□□□ -0.42
ERCC3-207ENST00000490062 TRAV10A0A0B4J240 114 aa12.39□□□□□ -0.43
ERCC3-207ENST00000490062 IGHV3-16A0A0C4DH30 117 aa12.39□□□□□ -0.43
ERCC3-207ENST00000490062 C9JCJ5 164 aa12.39□□□□□ -0.43
ERCC3-207ENST00000490062 SPINK4O60575 86 aa12.39□□□□□ -0.43
ERCC3-207ENST00000490062 IGLV2-8P01709 118 aa12.39□□□□□ -0.43
ERCC3-207ENST00000490062 TYMSP04818 313 aa12.39□□□□□ -0.43
ERCC3-207ENST00000490062 TOR2AQ5JU69 321 aa12.39□□□□□ -0.43
ERCC3-207ENST00000490062 DNLZQ5SXM8 178 aa12.39□□□□□ -0.43
ERCC3-207ENST00000490062 SPXQ9BT56 116 aa12.39□□□□□ -0.43
ERCC3-207ENST00000490062 SMDT1Q9H4I9 107 aa12.39□□□□□ -0.43
ERCC3-207ENST00000490062 TRBV20OR9-2A0A075B6H5 130 aa12.38□□□□□ -0.43
ERCC3-207ENST00000490062 IGKV3D-20A0A0C4DH25 116 aa12.38□□□□□ -0.43
ERCC3-207ENST00000490062 DAD1P61803 113 aa12.38□□□□□ -0.43
ERCC3-207ENST00000490062 IFITM2Q01629 132 aa12.38□□□□□ -0.43
ERCC3-207ENST00000490062 LINC01559Q495D7 138 aa12.38□□□□□ -0.43
ERCC3-207ENST00000490062 CENPWQ5EE01 88 aa12.38□□□□□ -0.43
ERCC3-207ENST00000490062 SH2D1AO60880 128 aa12.37□□□□□ -0.43
ERCC3-207ENST00000490062 PTH2Q96A98 100 aa12.37□□□□□ -0.43
ERCC3-207ENST00000490062 EIF5A2Q9GZV4 153 aaKnown RBP12.37□□□□□ -0.43
ERCC3-207ENST00000490062 MDFICQ9P1T7 246 aa12.37□□□□□ -0.43
ERCC3-207ENST00000490062 NAGKQ9UJ70 344 aa12.37□□□□□ -0.43
ERCC3-207ENST00000490062 GNRH2O43555 120 aa12.36□□□□□ -0.43
ERCC3-207ENST00000490062 CXCL1P09341 107 aa12.36□□□□□ -0.43
ERCC3-207ENST00000490062 GNG4P50150 75 aa12.36□□□□□ -0.43
ERCC3-207ENST00000490062 CLLU1Q5K131 121 aa12.36□□□□□ -0.43
ERCC3-207ENST00000490062 ZNF575Q86XF7 245 aa12.36□□□□□ -0.43
ERCC3-207ENST00000490062 PCNPQ8WW12 178 aaKnown RBP12.36□□□□□ -0.43
ERCC3-207ENST00000490062 RASL10AQ92737 203 aa12.36□□□□□ -0.43
ERCC3-207ENST00000490062 NDUFAF3Q9BU61 184 aa12.36□□□□□ -0.43
ERCC3-207ENST00000490062 PARLQ9H300 379 aa12.36□□□□□ -0.43
ERCC3-207ENST00000490062 PLECQ15149 4684 aaKnown RBP12.35□□□□□ -0.43
ERCC3-207ENST00000490062 RAB19A4D1S5 217 aa12.35□□□□□ -0.43
ERCC3-207ENST00000490062 KRBOX1C9JBD0 128 aa12.35□□□□□ -0.43
ERCC3-207ENST00000490062 SRP19P09132 144 aaKnown RBP12.35□□□□□ -0.43
ERCC3-207ENST00000490062 TCTAP57738 103 aa12.35□□□□□ -0.43
ERCC3-207ENST00000490062 RAB14P61106 215 aa12.35□□□□□ -0.43
ERCC3-207ENST00000490062 ZFAND6Q6FIF0 208 aa12.35□□□□□ -0.43
ERCC3-207ENST00000490062 NHLRC2Q8NBF2 726 aa12.35□□□□□ -0.43
ERCC3-207ENST00000490062 FAM210BQ96KR6 192 aa12.35□□□□□ -0.43
ERCC3-207ENST00000490062 C9orf85Q96MD7 179 aa12.35□□□□□ -0.43
ERCC3-207ENST00000490062 BIN3Q9NQY0 253 aa12.35□□□□□ -0.43
ERCC3-207ENST00000490062 KLK5Q9Y337 293 aaPredicted RBP12.35□□□□□ -0.43
ERCC3-207ENST00000490062 LY96Q9Y6Y9 160 aa12.35□□□□□ -0.43
ERCC3-207ENST00000490062 DEFB131BA0A096LNP1 70 aa12.34□□□□□ -0.43
ERCC3-207ENST00000490062 PIK3CD-AS1Q5SR53 167 aa12.34□□□□□ -0.43
ERCC3-207ENST00000490062 Q6ZTI0 123 aa12.34□□□□□ -0.43
ERCC3-207ENST00000490062 C19orf71A6NCJ1 209 aa12.33□□□□□ -0.44
ERCC3-207ENST00000490062 B4DEV8 164 aa12.33□□□□□ -0.44
ERCC3-207ENST00000490062 M0R2P5 195 aa12.33□□□□□ -0.44
ERCC3-207ENST00000490062 ATP5G1P05496 136 aa12.33□□□□□ -0.44
ERCC3-207ENST00000490062 DEFB130BP0DP73 79 aa12.33□□□□□ -0.44
ERCC3-207ENST00000490062 DEFB130AP0DP74 79 aa12.33□□□□□ -0.44
ERCC3-207ENST00000490062 RNASE3P12724 160 aaKnown RBP12.33□□□□□ -0.44
ERCC3-207ENST00000490062 PEA15Q15121 130 aa12.33□□□□□ -0.44
ERCC3-207ENST00000490062 IL36BQ9NZH7 164 aa12.33□□□□□ -0.44
ERCC3-207ENST00000490062 ORM1P02763 201 aa12.32□□□□□ -0.44
ERCC3-207ENST00000490062 MUC4Q99102 2169 aa12.31□□□□□ -0.44
ERCC3-207ENST00000490062 TRGV1A0A0A0MS02 117 aa12.31□□□□□ -0.44
ERCC3-207ENST00000490062 GAGE12BA1L429 117 aa12.31□□□□□ -0.44
ERCC3-207ENST00000490062 GAGE7O76087 117 aa12.31□□□□□ -0.44
ERCC3-207ENST00000490062 GAGE12FP0CL80 117 aa12.31□□□□□ -0.44
ERCC3-207ENST00000490062 GAGE12GP0CL81 117 aa12.31□□□□□ -0.44
ERCC3-207ENST00000490062 GAGE12IP0CL82 117 aa12.31□□□□□ -0.44
ERCC3-207ENST00000490062 MED14OSP0DP75 135 aa12.31□□□□□ -0.44
ERCC3-207ENST00000490062 ASIPP42127 132 aa12.31□□□□□ -0.44
ERCC3-207ENST00000490062 SCRT2Q9NQ03 307 aa12.31□□□□□ -0.44
ERCC3-207ENST00000490062 FAM74A3Q4VXF1 159 aa12.3□□□□□ -0.44
ERCC3-207ENST00000490062 PGPEP1LA6NFU8 196 aa12.29□□□□□ -0.44
ERCC3-207ENST00000490062 C9JQL5 133 aa12.29□□□□□ -0.44
ERCC3-207ENST00000490062 M0R036 132 aa12.29□□□□□ -0.44
ERCC3-207ENST00000490062 OCC1Q8TAD7 63 aa12.29□□□□□ -0.44
ERCC3-207ENST00000490062 SMIM7Q9BQ49 75 aa12.29□□□□□ -0.44
ERCC3-207ENST00000490062 MRPL16Q9NX20 251 aaKnown RBP12.29□□□□□ -0.44
ERCC3-207ENST00000490062 TRGV2A0A075B6R0 118 aa12.28□□□□□ -0.44
ERCC3-207ENST00000490062 K7EN84 100 aa12.28□□□□□ -0.44
ERCC3-207ENST00000490062 MGST1P10620 155 aaKnown RBP12.28□□□□□ -0.44
ERCC3-207ENST00000490062 S100A4P26447 101 aaKnown RBP12.28□□□□□ -0.44
ERCC3-207ENST00000490062 SRSF3P84103 164 aaKnown RBP12.28□□□□□ -0.44
ERCC3-207ENST00000490062 PRR27Q6MZM9 219 aa12.28□□□□□ -0.44
ERCC3-207ENST00000490062 SSBP4Q9BWG4 385 aaPredicted RBP12.28□□□□□ -0.44
ERCC3-207ENST00000490062 ZNF727A8MUV8 499 aa12.27□□□□□ -0.45
ERCC3-207ENST00000490062 CIDEAO60543 219 aa12.27□□□□□ -0.45
ERCC3-207ENST00000490062 RPS20P60866 119 aaKnown RBP12.27□□□□□ -0.45
ERCC3-207ENST00000490062 FAM231DQ6ZW35 169 aa12.27□□□□□ -0.45
ERCC3-207ENST00000490062 DAZAP1Q96EP5 407 aaKnown RBP12.27□□□□□ -0.45
ERCC3-207ENST00000490062 APLNQ9ULZ1 77 aa12.27□□□□□ -0.45
ERCC3-207ENST00000490062 TENM2Q9NT68 2774 aa12.27□□□□□ -0.45
ERCC3-207ENST00000490062 IGHV4-4A0A075B6R2 117 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms