RNA–Protein interactions for RNA: ENST00000489961.1

VPS13D-210, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-210ENST00000489961 ZNF767PQ75MW2 155 aa7.76□□□□□ -1.17
VPS13D-210ENST00000489961 C11orf72Q8NBR9 251 aa7.76□□□□□ -1.17
VPS13D-210ENST00000489961 ZC2HC1AQ96GY0 325 aa7.76□□□□□ -1.17
VPS13D-210ENST00000489961 DERL1Q9BUN8 251 aa7.76□□□□□ -1.17
VPS13D-210ENST00000489961 TRAV10A0A0B4J240 114 aa7.75□□□□□ -1.17
VPS13D-210ENST00000489961 TMEM250H0YL14 139 aa7.75□□□□□ -1.17
VPS13D-210ENST00000489961 NDUFS6O75380 124 aaKnown RBP7.75□□□□□ -1.17
VPS13D-210ENST00000489961 DEFB130BP0DP73 79 aa7.75□□□□□ -1.17
VPS13D-210ENST00000489961 DEFB130AP0DP74 79 aa7.75□□□□□ -1.17
VPS13D-210ENST00000489961 GNG4P50150 75 aa7.75□□□□□ -1.17
VPS13D-210ENST00000489961 ZNF674Q2M3X9 581 aa7.75□□□□□ -1.17
VPS13D-210ENST00000489961 CENPWQ5EE01 88 aa7.75□□□□□ -1.17
VPS13D-210ENST00000489961 CEMP1Q6PRD7 247 aaPredicted RBP7.75□□□□□ -1.17
VPS13D-210ENST00000489961 NHLRC2Q8NBF2 726 aa7.75□□□□□ -1.17
VPS13D-210ENST00000489961 MLST8Q9BVC4 326 aa7.75□□□□□ -1.17
VPS13D-210ENST00000489961 KLK5Q9Y337 293 aaPredicted RBP7.75□□□□□ -1.17
VPS13D-210ENST00000489961 RAB19A4D1S5 217 aa7.74□□□□□ -1.17
VPS13D-210ENST00000489961 GNRH2O43555 120 aa7.74□□□□□ -1.17
VPS13D-210ENST00000489961 SH2D1AO60880 128 aa7.74□□□□□ -1.17
VPS13D-210ENST00000489961 ORM1P02763 201 aa7.74□□□□□ -1.17
VPS13D-210ENST00000489961 TYMSP04818 313 aa7.74□□□□□ -1.17
VPS13D-210ENST00000489961 CRIP1P50238 77 aa7.74□□□□□ -1.17
VPS13D-210ENST00000489961 SMIM12Q96EX1 92 aa7.74□□□□□ -1.17
VPS13D-210ENST00000489961 SPXQ9BT56 116 aa7.74□□□□□ -1.17
VPS13D-210ENST00000489961 MDFICQ9P1T7 246 aa7.74□□□□□ -1.17
VPS13D-210ENST00000489961 C11orf21Q9P2W6 132 aa7.74□□□□□ -1.17
VPS13D-210ENST00000489961 DEFB131BA0A096LNP1 70 aa7.73□□□□□ -1.17
VPS13D-210ENST00000489961 TRGV1A0A0A0MS02 117 aa7.73□□□□□ -1.17
VPS13D-210ENST00000489961 IGHV3-16A0A0C4DH30 117 aa7.73□□□□□ -1.17
VPS13D-210ENST00000489961 GAGE12BA1L429 117 aa7.73□□□□□ -1.17
VPS13D-210ENST00000489961 B4DEV8 164 aa7.73□□□□□ -1.17
VPS13D-210ENST00000489961 SPINK4O60575 86 aa7.73□□□□□ -1.17
VPS13D-210ENST00000489961 GAGE7O76087 117 aa7.73□□□□□ -1.17
VPS13D-210ENST00000489961 GAGE12FP0CL80 117 aa7.73□□□□□ -1.17
VPS13D-210ENST00000489961 GAGE12GP0CL81 117 aa7.73□□□□□ -1.17
VPS13D-210ENST00000489961 GAGE12IP0CL82 117 aa7.73□□□□□ -1.17
VPS13D-210ENST00000489961 MGST1P10620 155 aaKnown RBP7.73□□□□□ -1.17
VPS13D-210ENST00000489961 CEBPGP53567 150 aa7.73□□□□□ -1.17
VPS13D-210ENST00000489961 LGALS9BQ3B8N2 356 aa7.73□□□□□ -1.17
VPS13D-210ENST00000489961 PRR27Q6MZM9 219 aa7.73□□□□□ -1.17
VPS13D-210ENST00000489961 PARLQ9H300 379 aa7.73□□□□□ -1.17
VPS13D-210ENST00000489961 BIN3Q9NQY0 253 aa7.73□□□□□ -1.17
VPS13D-210ENST00000489961 IGKV3D-20A0A0C4DH25 116 aa7.72□□□□□ -1.17
VPS13D-210ENST00000489961 C9JCJ5 164 aa7.72□□□□□ -1.17
VPS13D-210ENST00000489961 M0R036 132 aa7.72□□□□□ -1.17
VPS13D-210ENST00000489961 ATP5G1P05496 136 aa7.72□□□□□ -1.17
VPS13D-210ENST00000489961 HTN3P15516 51 aa7.72□□□□□ -1.17
VPS13D-210ENST00000489961 S100A4P26447 101 aaKnown RBP7.72□□□□□ -1.17
VPS13D-210ENST00000489961 ASIPP42127 132 aa7.72□□□□□ -1.17
VPS13D-210ENST00000489961 PEA15Q15121 130 aa7.72□□□□□ -1.17
VPS13D-210ENST00000489961 LINC01559Q495D7 138 aa7.72□□□□□ -1.17
VPS13D-210ENST00000489961 Q6ZTI0 123 aa7.72□□□□□ -1.17
VPS13D-210ENST00000489961 LINC00612Q8N6U2 182 aa7.72□□□□□ -1.17
VPS13D-210ENST00000489961 TRBV20OR9-2A0A075B6H5 130 aa7.71□□□□□ -1.18
VPS13D-210ENST00000489961 TRGV2A0A075B6R0 118 aa7.71□□□□□ -1.18
VPS13D-210ENST00000489961 KRBOX1C9JBD0 128 aa7.71□□□□□ -1.18
VPS13D-210ENST00000489961 M0R2P5 195 aa7.71□□□□□ -1.18
VPS13D-210ENST00000489961 IGLV2-8P01709 118 aa7.71□□□□□ -1.18
VPS13D-210ENST00000489961 SRP19P09132 144 aaKnown RBP7.71□□□□□ -1.18
VPS13D-210ENST00000489961 IFITM2Q01629 132 aa7.71□□□□□ -1.18
VPS13D-210ENST00000489961 OR5I1Q13606 314 aa7.71□□□□□ -1.18
VPS13D-210ENST00000489961 CLLU1Q5K131 121 aa7.71□□□□□ -1.18
VPS13D-210ENST00000489961 DAZAP1Q96EP5 407 aaKnown RBP7.71□□□□□ -1.18
VPS13D-210ENST00000489961 SMDT1Q9H4I9 107 aa7.71□□□□□ -1.18
VPS13D-210ENST00000489961 MRPL16Q9NX20 251 aaKnown RBP7.71□□□□□ -1.18
VPS13D-210ENST00000489961 PGPEP1LA6NFU8 196 aa7.7□□□□□ -1.18
VPS13D-210ENST00000489961 IGLL5B9A064 214 aa7.7□□□□□ -1.18
VPS13D-210ENST00000489961 DNLZQ5SXM8 178 aa7.7□□□□□ -1.18
VPS13D-210ENST00000489961 FAM210BQ96KR6 192 aa7.7□□□□□ -1.18
VPS13D-210ENST00000489961 C9orf85Q96MD7 179 aa7.7□□□□□ -1.18
VPS13D-210ENST00000489961 C18orf15Q96N68 181 aa7.7□□□□□ -1.18
VPS13D-210ENST00000489961 SMIM7Q9BQ49 75 aa7.7□□□□□ -1.18
VPS13D-210ENST00000489961 TMSB15BA0A087X1C1 80 aa7.69□□□□□ -1.18
VPS13D-210ENST00000489961 GRIFINA4D1Z8 144 aa7.69□□□□□ -1.18
VPS13D-210ENST00000489961 ZNF727A8MUV8 499 aa7.69□□□□□ -1.18
VPS13D-210ENST00000489961 F5H768 121 aa7.69□□□□□ -1.18
VPS13D-210ENST00000489961 CXCL1P09341 107 aa7.69□□□□□ -1.18
VPS13D-210ENST00000489961 RNASE3P12724 160 aaKnown RBP7.69□□□□□ -1.18
VPS13D-210ENST00000489961 TCTAP57738 103 aa7.69□□□□□ -1.18
VPS13D-210ENST00000489961 OCC1Q8TAD7 63 aa7.69□□□□□ -1.18
VPS13D-210ENST00000489961 RASL10AQ92737 203 aa7.69□□□□□ -1.18
VPS13D-210ENST00000489961 IL36BQ9NZH7 164 aa7.69□□□□□ -1.18
VPS13D-210ENST00000489961 IGHV4-4A0A075B6R2 117 aa7.68□□□□□ -1.18
VPS13D-210ENST00000489961 C19orf71A6NCJ1 209 aa7.68□□□□□ -1.18
VPS13D-210ENST00000489961 H3BVH4 76 aa7.68□□□□□ -1.18
VPS13D-210ENST00000489961 P01737 135 aa7.68□□□□□ -1.18
VPS13D-210ENST00000489961 RPS20P60866 119 aaKnown RBP7.68□□□□□ -1.18
VPS13D-210ENST00000489961 RPL19P84098 196 aaKnown RBP7.68□□□□□ -1.18
VPS13D-210ENST00000489961 SRSF3P84103 164 aaKnown RBP7.68□□□□□ -1.18
VPS13D-210ENST00000489961 ZNF876PQ49A33 203 aa7.68□□□□□ -1.18
VPS13D-210ENST00000489961 FAM74A3Q4VXF1 159 aa7.68□□□□□ -1.18
VPS13D-210ENST00000489961 NDUFAF3Q9BU61 184 aa7.68□□□□□ -1.18
VPS13D-210ENST00000489961 LY96Q9Y6Y9 160 aa7.68□□□□□ -1.18
VPS13D-210ENST00000489961 DNAH7Q8WXX0 4024 aa7.68□□□□□ -1.18
VPS13D-210ENST00000489961 XKRY2A2RUG3 117 aa7.67□□□□□ -1.18
VPS13D-210ENST00000489961 ARMS2P0C7Q2 107 aa7.67□□□□□ -1.18
VPS13D-210ENST00000489961 MED14OSP0DP75 135 aa7.67□□□□□ -1.18
VPS13D-210ENST00000489961 SYT8Q8NBV8 401 aa7.67□□□□□ -1.18
VPS13D-210ENST00000489961 OR2D3Q8NGH3 330 aa7.67□□□□□ -1.18
VPS13D-210ENST00000489961 PTH2Q96A98 100 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms