RNA–Protein interactions for RNA: ENST00000489898.1

SRSF4-204, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 3

Gene SRSF4, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-204ENST00000489898 STOML3Q8TAV4 291 aa8.06□□□□□ -1.12
SRSF4-204ENST00000489898 ZNF479Q96JC4 524 aa8.06□□□□□ -1.12
SRSF4-204ENST00000489898 OTORQ9NRC9 128 aa8.06□□□□□ -1.12
SRSF4-204ENST00000489898 IGHV3-16A0A0C4DH30 117 aa8.05□□□□□ -1.12
SRSF4-204ENST00000489898 A0A1W2PPQ1 181 aa8.05□□□□□ -1.12
SRSF4-204ENST00000489898 F6UZH7 168 aa8.05□□□□□ -1.12
SRSF4-204ENST00000489898 IGHV3-53P01767 116 aa8.05□□□□□ -1.12
SRSF4-204ENST00000489898 TYMSP04818 313 aa8.05□□□□□ -1.12
SRSF4-204ENST00000489898 SFTA3P0C7M3 94 aa8.05□□□□□ -1.12
SRSF4-204ENST00000489898 ATP6V0CP27449 155 aa8.05□□□□□ -1.12
SRSF4-204ENST00000489898 LINC00315P59091 139 aa8.05□□□□□ -1.12
SRSF4-204ENST00000489898 ALKAL2Q6UX46 152 aa8.05□□□□□ -1.12
SRSF4-204ENST00000489898 PQLC2Q6ZP29 291 aa8.05□□□□□ -1.12
SRSF4-204ENST00000489898 OR10G4Q8NGN3 311 aa8.05□□□□□ -1.12
SRSF4-204ENST00000489898 RASL10AQ92737 203 aa8.05□□□□□ -1.12
SRSF4-204ENST00000489898 PSMG3Q9BT73 122 aaPredicted RBP8.05□□□□□ -1.12
SRSF4-204ENST00000489898 BTF3P20290 206 aaKnown RBP8.04□□□□□ -1.12
SRSF4-204ENST00000489898 ZNF415Q09FC8 603 aa8.04□□□□□ -1.12
SRSF4-204ENST00000489898 DPPA3Q6W0C5 159 aa8.04□□□□□ -1.12
SRSF4-204ENST00000489898 GOLT1AQ6ZVE7 132 aa8.04□□□□□ -1.12
SRSF4-204ENST00000489898 ARL6IP6Q8N6S5 226 aa8.04□□□□□ -1.12
SRSF4-204ENST00000489898 TRGV2A0A075B6R0 118 aa8.03□□□□□ -1.12
SRSF4-204ENST00000489898 LOC100131303A0A0U1RQF7 123 aa8.03□□□□□ -1.12
SRSF4-204ENST00000489898 PGPA6NDG6 321 aa8.03□□□□□ -1.12
SRSF4-204ENST00000489898 ATP6V1G1O75348 118 aa8.03□□□□□ -1.12
SRSF4-204ENST00000489898 CDK2AP2O75956 126 aa8.03□□□□□ -1.12
SRSF4-204ENST00000489898 CDC34P49427 236 aaPredicted RBP8.03□□□□□ -1.12
SRSF4-204ENST00000489898 TMEM183BQ1AE95 376 aa8.03□□□□□ -1.12
SRSF4-204ENST00000489898 SOHLH1Q5JUK2 328 aa8.03□□□□□ -1.12
SRSF4-204ENST00000489898 CLLU1Q5K131 121 aa8.03□□□□□ -1.12
SRSF4-204ENST00000489898 IQCF2Q8IXL9 164 aa8.03□□□□□ -1.12
SRSF4-204ENST00000489898 TMEM183AQ8IXX5 376 aa8.03□□□□□ -1.12
SRSF4-204ENST00000489898 TMEM75Q8N9X5 138 aa8.03□□□□□ -1.12
SRSF4-204ENST00000489898 HSD17B11Q8NBQ5 300 aa8.03□□□□□ -1.12
SRSF4-204ENST00000489898 OR10G9Q8NGN4 311 aa8.03□□□□□ -1.12
SRSF4-204ENST00000489898 OR10G7Q8NGN6 311 aa8.03□□□□□ -1.12
SRSF4-204ENST00000489898 SCGB1C1Q8TD33 95 aa8.03□□□□□ -1.12
SRSF4-204ENST00000489898 RAB24Q969Q5 203 aa8.03□□□□□ -1.12
SRSF4-204ENST00000489898 C8orf49Q96NF6 230 aa8.03□□□□□ -1.12
SRSF4-204ENST00000489898 PRO0255Q9UI72 69 aa8.03□□□□□ -1.12
SRSF4-204ENST00000489898 PKHD1L1Q86WI1 4243 aa8.03□□□□□ -1.12
SRSF4-204ENST00000489898 SRRM2Q9UQ35 2752 aaKnown RBP8.02□□□□□ -1.13
SRSF4-204ENST00000489898 K7EQD1 137 aa8.02□□□□□ -1.13
SRSF4-204ENST00000489898 GNRH2O43555 120 aa8.02□□□□□ -1.13
SRSF4-204ENST00000489898 NXPH4O95158 308 aa8.02□□□□□ -1.13
SRSF4-204ENST00000489898 TCRAP04437 139 aa8.02□□□□□ -1.13
SRSF4-204ENST00000489898 GCHFRP30047 84 aa8.02□□□□□ -1.13
SRSF4-204ENST00000489898 TAS2R45P59539 299 aa8.02□□□□□ -1.13
SRSF4-204ENST00000489898 ACOT6Q3I5F7 207 aaPredicted RBP8.02□□□□□ -1.13
SRSF4-204ENST00000489898 RPL7L1Q6DKI1 246 aaKnown RBP8.02□□□□□ -1.13
SRSF4-204ENST00000489898 WFDC10BQ8IUB3 73 aa8.02□□□□□ -1.13
SRSF4-204ENST00000489898 SGK494Q96LW2 274 aa8.02□□□□□ -1.13
SRSF4-204ENST00000489898 C9orf85Q96MD7 179 aa8.02□□□□□ -1.13
SRSF4-204ENST00000489898 TNFRSF18Q9Y5U5 241 aa8.02□□□□□ -1.13
SRSF4-204ENST00000489898 LINC00694P0DN24 101 aa8.01□□□□□ -1.13
SRSF4-204ENST00000489898 TTC32Q5I0X7 151 aa8.01□□□□□ -1.13
SRSF4-204ENST00000489898 LYPD5Q6UWN5 251 aa8.01□□□□□ -1.13
SRSF4-204ENST00000489898 CYTL1Q9NRR1 136 aa8.01□□□□□ -1.13
SRSF4-204ENST00000489898 RPH3ALQ9UNE2 315 aa8.01□□□□□ -1.13
SRSF4-204ENST00000489898 ICOSQ9Y6W8 199 aa8.01□□□□□ -1.13
SRSF4-204ENST00000489898 TRAV4A0A0B4J268 109 aa8□□□□□ -1.13
SRSF4-204ENST00000489898 C16orf90A8MZG2 172 aa8□□□□□ -1.13
SRSF4-204ENST00000489898 PAX4O43316 350 aa8□□□□□ -1.13
SRSF4-204ENST00000489898 RNASE3P12724 160 aaKnown RBP8□□□□□ -1.13
SRSF4-204ENST00000489898 GATA1P15976 413 aaPredicted RBP8□□□□□ -1.13
SRSF4-204ENST00000489898 S100A1P23297 94 aa8□□□□□ -1.13
SRSF4-204ENST00000489898 FUSP35637 526 aaKnown RBP eCLIP8□□□□□ -1.13
SRSF4-204ENST00000489898 CSN1S1P47710 185 aa8□□□□□ -1.13
SRSF4-204ENST00000489898 SPATA12Q7Z6I5 190 aa8□□□□□ -1.13
SRSF4-204ENST00000489898 C5orf17Q8NAS9 161 aa8□□□□□ -1.13
SRSF4-204ENST00000489898 HHLA3Q9XRX5 114 aa8□□□□□ -1.13
SRSF4-204ENST00000489898 TRGV11A0A075B6L2 103 aa7.99□□□□□ -1.13
SRSF4-204ENST00000489898 SIVA1O15304 175 aa7.99□□□□□ -1.13
SRSF4-204ENST00000489898 SEC11BP0C7V7 166 aa7.99□□□□□ -1.13
SRSF4-204ENST00000489898 DNAH10OSP0CZ25 163 aa7.99□□□□□ -1.13
SRSF4-204ENST00000489898 RAB5CP51148 216 aa7.99□□□□□ -1.13
SRSF4-204ENST00000489898 BLOC1S1P78537 153 aa7.99□□□□□ -1.13
SRSF4-204ENST00000489898 FAM74A1Q5RGS3 127 aa7.99□□□□□ -1.13
SRSF4-204ENST00000489898 AKR1C8PQ5T2L2 129 aa7.99□□□□□ -1.13
SRSF4-204ENST00000489898 COMMD7Q86VX2 200 aa7.99□□□□□ -1.13
SRSF4-204ENST00000489898 SPXQ9BT56 116 aa7.99□□□□□ -1.13
SRSF4-204ENST00000489898 FAT3Q8TDW7 4589 aa7.98□□□□□ -1.13
SRSF4-204ENST00000489898 TRAV21A0A0B4J279 112 aa7.98□□□□□ -1.13
SRSF4-204ENST00000489898 UMAD1C9J7I0 102 aa7.98□□□□□ -1.13
SRSF4-204ENST00000489898 TEX46H3BTG2 121 aa7.98□□□□□ -1.13
SRSF4-204ENST00000489898 UFSP1Q6NVU6 142 aa7.98□□□□□ -1.13
SRSF4-204ENST00000489898 LINC00479Q96M42 142 aa7.98□□□□□ -1.13
SRSF4-204ENST00000489898 KRTAP3-3Q9BYR6 98 aa7.98□□□□□ -1.13
SRSF4-204ENST00000489898 KRTAP3-2Q9BYR7 98 aa7.98□□□□□ -1.13
SRSF4-204ENST00000489898 TREM1Q9NP99 234 aa7.98□□□□□ -1.13
SRSF4-204ENST00000489898 NAGKQ9UJ70 344 aa7.98□□□□□ -1.13
SRSF4-204ENST00000489898 IGKV3D-20A0A0C4DH25 116 aa7.97□□□□□ -1.13
SRSF4-204ENST00000489898 LINC00862A6NCI5 91 aa7.97□□□□□ -1.13
SRSF4-204ENST00000489898 M0R2P5 195 aa7.97□□□□□ -1.13
SRSF4-204ENST00000489898 GYPEP15421 78 aa7.97□□□□□ -1.13
SRSF4-204ENST00000489898 SULT1A2P50226 295 aa7.97□□□□□ -1.13
SRSF4-204ENST00000489898 SERF2P84101 59 aa7.97□□□□□ -1.13
SRSF4-204ENST00000489898 CFAP126Q5VTH2 177 aa7.97□□□□□ -1.13
SRSF4-204ENST00000489898 FAM159AQ6UWV7 190 aa7.97□□□□□ -1.13
SRSF4-204ENST00000489898 Q86TA4 180 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms