RNA–Protein interactions for RNA: ENST00000489614.5

NOD1-208, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 2

Gene NOD1, Length 3,098 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-208ENST00000489614 KLF17Q5JT82 389 aaPredicted RBP7.64□□□□□ -1.19
NOD1-208ENST00000489614 MORN3Q6PF18 240 aaPredicted RBP7.64□□□□□ -1.19
NOD1-208ENST00000489614 PIMREGQ9BSJ6 248 aa7.64□□□□□ -1.19
NOD1-208ENST00000489614 TMEM160Q9NX00 188 aa7.64□□□□□ -1.19
NOD1-208ENST00000489614 A8MWV9 139 aa7.63□□□□□ -1.19
NOD1-208ENST00000489614 H3BTX0 84 aa7.63□□□□□ -1.19
NOD1-208ENST00000489614 DNAJC30Q96LL9 226 aa7.63□□□□□ -1.19
NOD1-208ENST00000489614 ASCL2Q99929 193 aa7.63□□□□□ -1.19
NOD1-208ENST00000489614 TMEM126AQ9H061 195 aa7.63□□□□□ -1.19
NOD1-208ENST00000489614 ABCA1O95477 2261 aa7.63□□□□□ -1.19
NOD1-208ENST00000489614 CSPG4Q6UVK1 2322 aa7.63□□□□□ -1.19
NOD1-208ENST00000489614 SRRM4A7MD48 611 aaKnown RBP7.63□□□□□ -1.19
NOD1-208ENST00000489614 INS-IGF2F8WCM5 200 aa7.63□□□□□ -1.19
NOD1-208ENST00000489614 ENSAO43768 121 aaKnown RBP7.63□□□□□ -1.19
NOD1-208ENST00000489614 FCGR3BO75015 233 aa7.63□□□□□ -1.19
NOD1-208ENST00000489614 ARMS2P0C7Q2 107 aa7.63□□□□□ -1.19
NOD1-208ENST00000489614 EMP1P54849 157 aa7.63□□□□□ -1.19
NOD1-208ENST00000489614 PVRIGQ6DKI7 326 aa7.63□□□□□ -1.19
NOD1-208ENST00000489614 PDPNQ86YL7 162 aa7.63□□□□□ -1.19
NOD1-208ENST00000489614 TMEM14BQ9NUH8 114 aa7.63□□□□□ -1.19
NOD1-208ENST00000489614 EPDR1Q9UM22 224 aa7.63□□□□□ -1.19
NOD1-208ENST00000489614 FOXA2Q9Y261 457 aaPredicted RBP7.63□□□□□ -1.19
NOD1-208ENST00000489614 C9JAW5 83 aa7.63□□□□□ -1.19
NOD1-208ENST00000489614 MOSP00540 346 aa7.63□□□□□ -1.19
NOD1-208ENST00000489614 DLX1P56177 255 aa7.63□□□□□ -1.19
NOD1-208ENST00000489614 PRR20EP86478 221 aa7.63□□□□□ -1.19
NOD1-208ENST00000489614 PRR20CP86479 221 aa7.63□□□□□ -1.19
NOD1-208ENST00000489614 PRR20DP86480 221 aa7.63□□□□□ -1.19
NOD1-208ENST00000489614 PRR20BP86481 221 aa7.63□□□□□ -1.19
NOD1-208ENST00000489614 PRR20AP86496 221 aa7.63□□□□□ -1.19
NOD1-208ENST00000489614 EBI3Q14213 229 aa7.63□□□□□ -1.19
NOD1-208ENST00000489614 Q8N6K4 173 aa7.63□□□□□ -1.19
NOD1-208ENST00000489614 HHLA3Q9XRX5 114 aa7.63□□□□□ -1.19
NOD1-208ENST00000489614 HIGD1AQ9Y241 93 aa7.63□□□□□ -1.19
NOD1-208ENST00000489614 PRRC2AP48634 2157 aaKnown RBP7.62□□□□□ -1.19
NOD1-208ENST00000489614 D6R8Y8 96 aa7.62□□□□□ -1.19
NOD1-208ENST00000489614 C8orf88P0DMB2 117 aa7.62□□□□□ -1.19
NOD1-208ENST00000489614 TMEM78Q5T7P6 136 aa7.62□□□□□ -1.19
NOD1-208ENST00000489614 C15orf53Q8NAA6 179 aa7.62□□□□□ -1.19
NOD1-208ENST00000489614 OR1L4Q8NGR5 311 aa7.62□□□□□ -1.19
NOD1-208ENST00000489614 TNCP24821 2201 aa7.62□□□□□ -1.19
NOD1-208ENST00000489614 MALRD1Q5VYJ5 2156 aa7.62□□□□□ -1.19
NOD1-208ENST00000489614 PRSS46E5RG02 174 aa7.62□□□□□ -1.19
NOD1-208ENST00000489614 F5H768 121 aa7.62□□□□□ -1.19
NOD1-208ENST00000489614 HBDP02042 147 aa7.62□□□□□ -1.19
NOD1-208ENST00000489614 IGKV1-16P04430 117 aa7.62□□□□□ -1.19
NOD1-208ENST00000489614 SLC25A16P16260 332 aa7.62□□□□□ -1.19
NOD1-208ENST00000489614 VMO1Q7Z5L0 202 aa7.62□□□□□ -1.19
NOD1-208ENST00000489614 FLYWCH2Q96CP2 140 aaKnown RBP7.62□□□□□ -1.19
NOD1-208ENST00000489614 LINC01587Q99440 93 aa7.62□□□□□ -1.19
NOD1-208ENST00000489614 ITPR2Q14571 2701 aa7.61□□□□□ -1.19
NOD1-208ENST00000489614 IGKV1OR2-108A0A075B7D4 117 aa7.61□□□□□ -1.19
NOD1-208ENST00000489614 CGB1A6NKQ9 187 aa7.61□□□□□ -1.19
NOD1-208ENST00000489614 C15orf61A6NNL5 157 aa7.61□□□□□ -1.19
NOD1-208ENST00000489614 DEFB113Q30KQ7 82 aa7.61□□□□□ -1.19
NOD1-208ENST00000489614 Q71RC1 249 aaPredicted RBP7.61□□□□□ -1.19
NOD1-208ENST00000489614 SVEP1Q4LDE5 3571 aa7.61□□□□□ -1.19
NOD1-208ENST00000489614 IGHV1-3A0A0C4DH29 117 aa7.61□□□□□ -1.19
NOD1-208ENST00000489614 SMKR1H3BMG3 65 aa7.61□□□□□ -1.19
NOD1-208ENST00000489614 FSHBP01225 129 aa7.61□□□□□ -1.19
NOD1-208ENST00000489614 SCGB1C2P0DMR2 95 aa7.61□□□□□ -1.19
NOD1-208ENST00000489614 ZNF329Q86UD4 541 aa7.61□□□□□ -1.19
NOD1-208ENST00000489614 S1PR3Q99500 378 aa7.61□□□□□ -1.19
NOD1-208ENST00000489614 CITED2Q99967 270 aaPredicted RBP7.61□□□□□ -1.19
NOD1-208ENST00000489614 C7orf69Q9H7B7 122 aa7.61□□□□□ -1.19
NOD1-208ENST00000489614 MINOS1Q5TGZ0 78 aa7.6□□□□□ -1.19
NOD1-208ENST00000489614 DYNAPQ8N1N2 210 aa7.6□□□□□ -1.19
NOD1-208ENST00000489614 RITA1Q96K30 269 aa7.6□□□□□ -1.19
NOD1-208ENST00000489614 MINOS1-NBL1R4GNA1 71 aa7.6□□□□□ -1.19
NOD1-208ENST00000489614 TRAV40A0A0B4J280 105 aa7.6□□□□□ -1.19
NOD1-208ENST00000489614 WI2-2373I1.2A0A1W2PRP0 233 aa7.6□□□□□ -1.19
NOD1-208ENST00000489614 PGPA6NDG6 321 aa7.6□□□□□ -1.19
NOD1-208ENST00000489614 NPFFO15130 113 aa7.6□□□□□ -1.19
NOD1-208ENST00000489614 IGHV3-48P01763 117 aa7.6□□□□□ -1.19
NOD1-208ENST00000489614 OR10J6PQ8NGY7 276 aa7.6□□□□□ -1.19
NOD1-208ENST00000489614 TMEM167AQ8TBQ9 72 aa7.6□□□□□ -1.19
NOD1-208ENST00000489614 RNF5Q99942 180 aa7.6□□□□□ -1.19
NOD1-208ENST00000489614 A0A1B0GUT8 65 aa7.6□□□□□ -1.19
NOD1-208ENST00000489614 UPK2O00526 184 aa7.6□□□□□ -1.19
NOD1-208ENST00000489614 NDUFA3O95167 84 aa7.6□□□□□ -1.19
NOD1-208ENST00000489614 TCL1BO95988 128 aa7.6□□□□□ -1.19
NOD1-208ENST00000489614 IGKCP01834 107 aa7.6□□□□□ -1.19
NOD1-208ENST00000489614 UBE2E1P51965 193 aa7.6□□□□□ -1.19
NOD1-208ENST00000489614 C10orf126Q8N4M7 172 aa7.6□□□□□ -1.19
NOD1-208ENST00000489614 NPBQ8NG41 125 aa7.6□□□□□ -1.19
NOD1-208ENST00000489614 SRSF12Q8WXF0 261 aaKnown RBP7.6□□□□□ -1.19
NOD1-208ENST00000489614 NPIPB3Q92617 1050 aa7.6□□□□□ -1.19
NOD1-208ENST00000489614 TMEM101Q96IK0 257 aa7.6□□□□□ -1.19
NOD1-208ENST00000489614 FOXC2Q99958 501 aa7.6□□□□□ -1.19
NOD1-208ENST00000489614 WIPF1O43516 503 aa7.59□□□□□ -1.19
NOD1-208ENST00000489614 PAXXQ9BUH6 204 aa7.59□□□□□ -1.19
NOD1-208ENST00000489614 CELSR1Q9NYQ6 3014 aa7.59□□□□□ -1.19
NOD1-208ENST00000489614 HLA-DRB4P13762 266 aa7.59□□□□□ -1.19
NOD1-208ENST00000489614 SRSF2Q01130 221 aaKnown RBP7.59□□□□□ -1.19
NOD1-208ENST00000489614 HES1Q14469 280 aa7.59□□□□□ -1.19
NOD1-208ENST00000489614 KLK9Q2XQG4 91 aa7.59□□□□□ -1.19
NOD1-208ENST00000489614 C9orf153Q5TBE3 101 aa7.59□□□□□ -1.19
NOD1-208ENST00000489614 KLK9Q9UKQ9 250 aa7.59□□□□□ -1.19
NOD1-208ENST00000489614 HLA-DRB4X5D2U9 266 aa7.59□□□□□ -1.19
NOD1-208ENST00000489614 MTORP42345 2549 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms