RNA–Protein interactions for RNA: ENST00000489611.5

COL9A1-208, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,940 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-208ENST00000489611 DEFB112Q30KQ8 113 aa11.35□□□□□ -0.59
COL9A1-208ENST00000489611 MUC21Q5SSG8 566 aa11.35□□□□□ -0.59
COL9A1-208ENST00000489611 SLC25A34Q6PIV7 304 aa11.35□□□□□ -0.59
COL9A1-208ENST00000489611 WFDC11Q8NEX6 87 aa11.35□□□□□ -0.59
COL9A1-208ENST00000489611 C20orf173Q96LM9 149 aa11.35□□□□□ -0.59
COL9A1-208ENST00000489611 FAM19A4Q96LR4 140 aa11.35□□□□□ -0.59
COL9A1-208ENST00000489611 MSRB1Q9NZV6 116 aa11.35□□□□□ -0.59
COL9A1-208ENST00000489611 TNFRSF6BO95407 300 aa11.35□□□□□ -0.59
COL9A1-208ENST00000489611 RPL11P62913 178 aaKnown RBP11.35□□□□□ -0.59
COL9A1-208ENST00000489611 SPANXN1Q5VSR9 72 aa11.35□□□□□ -0.59
COL9A1-208ENST00000489611 OR8A1Q8NGG7 326 aa11.35□□□□□ -0.59
COL9A1-208ENST00000489611 FASNP49327 2511 aaKnown RBP11.34□□□□□ -0.59
COL9A1-208ENST00000489611 MAP1AP78559 2803 aaPredicted RBP11.34□□□□□ -0.59
COL9A1-208ENST00000489611 IGHV4-31P0DP07 118 aa11.34□□□□□ -0.59
COL9A1-208ENST00000489611 ZFAND2AQ8N6M9 145 aa11.34□□□□□ -0.59
COL9A1-208ENST00000489611 MRAP2Q96G30 205 aa11.34□□□□□ -0.59
COL9A1-208ENST00000489611 IGHV4-59P01825 116 aa11.33□□□□□ -0.6
COL9A1-208ENST00000489611 FCER1GP30273 86 aa11.33□□□□□ -0.6
COL9A1-208ENST00000489611 GAGE1Q13065 139 aa11.33□□□□□ -0.6
COL9A1-208ENST00000489611 BATFQ16520 125 aa11.33□□□□□ -0.6
COL9A1-208ENST00000489611 Q8N8P6 123 aa11.33□□□□□ -0.6
COL9A1-208ENST00000489611 OR1N2Q8NGR9 330 aa11.33□□□□□ -0.6
COL9A1-208ENST00000489611 VPREB3Q9UKI3 123 aa11.33□□□□□ -0.6
COL9A1-208ENST00000489611 FSHBP01225 129 aa11.33□□□□□ -0.6
COL9A1-208ENST00000489611 Q6ZS46 218 aa11.33□□□□□ -0.6
COL9A1-208ENST00000489611 IFI27L1Q96BM0 104 aa11.33□□□□□ -0.6
COL9A1-208ENST00000489611 SCRT2Q9NQ03 307 aa11.33□□□□□ -0.6
COL9A1-208ENST00000489611 GOLT1BQ9Y3E0 138 aa11.33□□□□□ -0.6
COL9A1-208ENST00000489611 PRRC2AP48634 2157 aaKnown RBP11.32□□□□□ -0.6
COL9A1-208ENST00000489611 ELANEP08246 267 aa11.32□□□□□ -0.6
COL9A1-208ENST00000489611 ASIPP42127 132 aa11.32□□□□□ -0.6
COL9A1-208ENST00000489611 OR2K2Q8NGT1 345 aa11.32□□□□□ -0.6
COL9A1-208ENST00000489611 TIMM8BQ9Y5J9 83 aaPredicted RBP11.32□□□□□ -0.6
COL9A1-208ENST00000489611 hDV102S1A0JD36 115 aa11.31□□□□□ -0.6
COL9A1-208ENST00000489611 SMKR1H3BMG3 65 aa11.31□□□□□ -0.6
COL9A1-208ENST00000489611 K7EMI3 77 aa11.31□□□□□ -0.6
COL9A1-208ENST00000489611 NCR2O95944 276 aa11.31□□□□□ -0.6
COL9A1-208ENST00000489611 TM4SF20Q53R12 229 aa11.31□□□□□ -0.6
COL9A1-208ENST00000489611 C12orf54Q6X4T0 127 aa11.31□□□□□ -0.6
COL9A1-208ENST00000489611 Q6YL49 198 aa11.31□□□□□ -0.6
COL9A1-208ENST00000489611 ODF3Q96PU9 254 aa11.31□□□□□ -0.6
COL9A1-208ENST00000489611 CELSR1Q9NYQ6 3014 aa11.31□□□□□ -0.6
COL9A1-208ENST00000489611 H0Y8G0 127 aa11.31□□□□□ -0.6
COL9A1-208ENST00000489611 EVI2AP22794 236 aa11.31□□□□□ -0.6
COL9A1-208ENST00000489611 LGALS9O00182 355 aa11.3□□□□□ -0.6
COL9A1-208ENST00000489611 PPP1R17O96001 155 aa11.3□□□□□ -0.6
COL9A1-208ENST00000489611 COX8AP10176 69 aa11.3□□□□□ -0.6
COL9A1-208ENST00000489611 S100A4P26447 101 aaKnown RBP11.3□□□□□ -0.6
COL9A1-208ENST00000489611 PRR9Q5T870 116 aa11.29□□□□□ -0.6
COL9A1-208ENST00000489611 ZFHX3Q15911 3703 aa11.29□□□□□ -0.6
COL9A1-208ENST00000489611 CR1P17927 2039 aa11.29□□□□□ -0.6
COL9A1-208ENST00000489611 H3BVH4 76 aa11.29□□□□□ -0.6
COL9A1-208ENST00000489611 ATP5LO75964 103 aa11.29□□□□□ -0.6
COL9A1-208ENST00000489611 ZNF25P17030 456 aaPredicted RBP11.29□□□□□ -0.6
COL9A1-208ENST00000489611 TEX29Q8N6K0 151 aa11.29□□□□□ -0.6
COL9A1-208ENST00000489611 MYOZ3Q8TDC0 251 aa11.29□□□□□ -0.6
COL9A1-208ENST00000489611 DCANP1Q8TF63 244 aa11.29□□□□□ -0.6
COL9A1-208ENST00000489611 KLLNB2CW77 178 aa11.28□□□□□ -0.6
COL9A1-208ENST00000489611 LGALS1P09382 135 aaKnown RBP11.28□□□□□ -0.6
COL9A1-208ENST00000489611 LEPP41159 167 aa11.28□□□□□ -0.6
COL9A1-208ENST00000489611 SNRPD3P62318 126 aaKnown RBP11.28□□□□□ -0.6
COL9A1-208ENST00000489611 RNF152Q8N8N0 203 aa11.28□□□□□ -0.6
COL9A1-208ENST00000489611 UBE2E2Q96LR5 201 aa11.28□□□□□ -0.6
COL9A1-208ENST00000489611 C20orf78Q9BR46 151 aa11.28□□□□□ -0.6
COL9A1-208ENST00000489611 DPH3P1Q9H4G8 78 aa11.28□□□□□ -0.6
COL9A1-208ENST00000489611 PHLDA3Q9Y5J5 127 aa11.28□□□□□ -0.6
COL9A1-208ENST00000489611 ZNF469Q96JG9 3925 aaPredicted RBP11.28□□□□□ -0.6
COL9A1-208ENST00000489611 PDZD2O15018 2839 aa11.28□□□□□ -0.6
COL9A1-208ENST00000489611 IGLV2-18A0A075B6J9 118 aa11.27□□□□□ -0.6
COL9A1-208ENST00000489611 M0R381 172 aa11.27□□□□□ -0.6
COL9A1-208ENST00000489611 LAGE3Q14657 143 aa11.27□□□□□ -0.6
COL9A1-208ENST00000489611 STPG4Q8N801 248 aa11.27□□□□□ -0.6
COL9A1-208ENST00000489611 NRACQ8N912 160 aa11.27□□□□□ -0.6
COL9A1-208ENST00000489611 FOXC2Q99958 501 aa11.27□□□□□ -0.6
COL9A1-208ENST00000489611 TMEM208Q9BTX3 173 aa11.27□□□□□ -0.6
COL9A1-208ENST00000489611 DLEU1O43261 78 aa11.27□□□□□ -0.61
COL9A1-208ENST00000489611 LCNL1Q6ZST4 164 aa11.27□□□□□ -0.61
COL9A1-208ENST00000489611 RNASE4P34096 147 aaKnown RBP11.26□□□□□ -0.61
COL9A1-208ENST00000489611 HINT1P49773 126 aaPredicted RBP11.26□□□□□ -0.61
COL9A1-208ENST00000489611 ANXA2RQ3ZCQ2 193 aa11.26□□□□□ -0.61
COL9A1-208ENST00000489611 AP1S3Q96PC3 154 aa11.26□□□□□ -0.61
COL9A1-208ENST00000489611 UNC79Q9P2D8 2635 aa11.26□□□□□ -0.61
COL9A1-208ENST00000489611 HECTD1Q9ULT8 2610 aa11.25□□□□□ -0.61
COL9A1-208ENST00000489611 NXPH4O95158 308 aa11.25□□□□□ -0.61
COL9A1-208ENST00000489611 KIR3DS1Q14943 382 aa11.25□□□□□ -0.61
COL9A1-208ENST00000489611 ORAOV1Q8WV07 137 aa11.25□□□□□ -0.61
COL9A1-208ENST00000489611 LINC01549A6NIU2 74 aa11.25□□□□□ -0.61
COL9A1-208ENST00000489611 SIVA1O15304 175 aa11.25□□□□□ -0.61
COL9A1-208ENST00000489611 TMEM95Q3KNT9 176 aa11.25□□□□□ -0.61
COL9A1-208ENST00000489611 ORMDL2Q53FV1 153 aa11.25□□□□□ -0.61
COL9A1-208ENST00000489611 FAM159AQ6UWV7 190 aa11.25□□□□□ -0.61
COL9A1-208ENST00000489611 OR9G4Q8NGQ1 327 aa11.24□□□□□ -0.61
COL9A1-208ENST00000489611 MCRIP2Q9BUT9 160 aaKnown RBP11.24□□□□□ -0.61
COL9A1-208ENST00000489611 ZNF702PQ9H963 129 aa11.24□□□□□ -0.61
COL9A1-208ENST00000489611 CCDC168Q8NDH2 2452 aa11.24□□□□□ -0.61
COL9A1-208ENST00000489611 G0S2P27469 103 aa11.23□□□□□ -0.61
COL9A1-208ENST00000489611 Q8N2B8 174 aa11.23□□□□□ -0.61
COL9A1-208ENST00000489611 POM121L12Q8N7R1 296 aa11.23□□□□□ -0.61
COL9A1-208ENST00000489611 TMEM158Q8WZ71 300 aa11.23□□□□□ -0.61
COL9A1-208ENST00000489611 SMIM2Q9BVW6 85 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms