RNA–Protein interactions for RNA: ENST00000489430.1

MRPL55-230, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-230ENST00000489430 PRSS29PA6NIE9 313 aa13.17□□□□□ -0.3
MRPL55-230ENST00000489430 F6UZH7 168 aa13.17□□□□□ -0.3
MRPL55-230ENST00000489430 M0R2P5 195 aa13.17□□□□□ -0.3
MRPL55-230ENST00000489430 PAX4O43316 350 aa13.17□□□□□ -0.3
MRPL55-230ENST00000489430 PFN1P07737 140 aaKnown RBP13.17□□□□□ -0.3
MRPL55-230ENST00000489430 SEC11BP0C7V7 166 aa13.17□□□□□ -0.3
MRPL55-230ENST00000489430 PPT1P50897 306 aa13.17□□□□□ -0.3
MRPL55-230ENST00000489430 ESRGQ1W209 222 aa13.17□□□□□ -0.3
MRPL55-230ENST00000489430 SMUG1Q53HV7 270 aa13.17□□□□□ -0.3
MRPL55-230ENST00000489430 STOML3Q8TAV4 291 aa13.17□□□□□ -0.3
MRPL55-230ENST00000489430 Q9H8V8 135 aa13.17□□□□□ -0.3
MRPL55-230ENST00000489430 HHLA3Q9XRX5 114 aa13.17□□□□□ -0.3
MRPL55-230ENST00000489430 MRPS16Q9Y3D3 137 aaKnown RBP13.17□□□□□ -0.3
MRPL55-230ENST00000489430 MAP1LC3B2A6NCE7 125 aa13.16□□□□□ -0.3
MRPL55-230ENST00000489430 UMAD1C9J7I0 102 aa13.16□□□□□ -0.3
MRPL55-230ENST00000489430 SMLR1H3BR10 107 aa13.16□□□□□ -0.3
MRPL55-230ENST00000489430 FHL2Q14192 279 aa13.16□□□□□ -0.3
MRPL55-230ENST00000489430 TTC32Q5I0X7 151 aa13.16□□□□□ -0.3
MRPL55-230ENST00000489430 SGK494Q96LW2 274 aa13.16□□□□□ -0.3
MRPL55-230ENST00000489430 MAP1LC3BQ9GZQ8 125 aa13.16□□□□□ -0.3
MRPL55-230ENST00000489430 ICOSQ9Y6W8 199 aa13.16□□□□□ -0.3
MRPL55-230ENST00000489430 ARL2-SNX15V9GYD0 113 aa13.16□□□□□ -0.3
MRPL55-230ENST00000489430 DNAH17Q9UFH2 4485 aa13.16□□□□□ -0.3
MRPL55-230ENST00000489430 NACAE9PAV3 2078 aa13.16□□□□□ -0.3
MRPL55-230ENST00000489430 A0A1B0GVY2 172 aa13.15□□□□□ -0.3
MRPL55-230ENST00000489430 FAM74A7A6NL05 159 aa13.15□□□□□ -0.3
MRPL55-230ENST00000489430 GNRH2O43555 120 aa13.15□□□□□ -0.3
MRPL55-230ENST00000489430 GCGP01275 180 aa13.15□□□□□ -0.3
MRPL55-230ENST00000489430 IFNA7P01567 189 aa13.15□□□□□ -0.3
MRPL55-230ENST00000489430 TYMSP04818 313 aa13.15□□□□□ -0.3
MRPL55-230ENST00000489430 BTF3P20290 206 aaKnown RBP13.15□□□□□ -0.3
MRPL55-230ENST00000489430 FHITP49789 147 aa13.15□□□□□ -0.3
MRPL55-230ENST00000489430 CRYBA4P53673 196 aa13.15□□□□□ -0.3
MRPL55-230ENST00000489430 EIF5AP63241 154 aaKnown RBP13.15□□□□□ -0.3
MRPL55-230ENST00000489430 MUC4Q99102 2169 aa13.14□□□□□ -0.31
MRPL55-230ENST00000489430 TRAV4A0A0B4J268 109 aa13.14□□□□□ -0.31
MRPL55-230ENST00000489430 A0A1W2PPQ1 181 aa13.14□□□□□ -0.31
MRPL55-230ENST00000489430 KANTRA0A1W2PQU2 76 aa13.14□□□□□ -0.31
MRPL55-230ENST00000489430 IGHV3-53P01767 116 aa13.14□□□□□ -0.31
MRPL55-230ENST00000489430 MRPL23Q16540 153 aaKnown RBP13.14□□□□□ -0.31
MRPL55-230ENST00000489430 PRNTQ86SH4 94 aa13.14□□□□□ -0.31
MRPL55-230ENST00000489430 OR11H4Q8NGC9 324 aa13.14□□□□□ -0.31
MRPL55-230ENST00000489430 TRGV4A0A0C4DH28 118 aa13.13□□□□□ -0.31
MRPL55-230ENST00000489430 PEX7O00628 323 aa13.13□□□□□ -0.31
MRPL55-230ENST00000489430 CIDEAO60543 219 aa13.13□□□□□ -0.31
MRPL55-230ENST00000489430 ZNF80P51504 273 aaPredicted RBP13.13□□□□□ -0.31
MRPL55-230ENST00000489430 FGF8P55075 233 aaPredicted RBP13.13□□□□□ -0.31
MRPL55-230ENST00000489430 DPPA3Q6W0C5 159 aa13.13□□□□□ -0.31
MRPL55-230ENST00000489430 PTH2Q96A98 100 aa13.13□□□□□ -0.31
MRPL55-230ENST00000489430 C8orf49Q96NF6 230 aa13.13□□□□□ -0.31
MRPL55-230ENST00000489430 BCL2L11O43521 198 aa13.12□□□□□ -0.31
MRPL55-230ENST00000489430 ORM1P02763 201 aa13.12□□□□□ -0.31
MRPL55-230ENST00000489430 UBE2G2P60604 165 aa13.12□□□□□ -0.31
MRPL55-230ENST00000489430 COX8CQ7Z4L0 72 aa13.12□□□□□ -0.31
MRPL55-230ENST00000489430 C6orf223Q8N319 242 aa13.12□□□□□ -0.31
MRPL55-230ENST00000489430 ZNF479Q96JC4 524 aa13.12□□□□□ -0.31
MRPL55-230ENST00000489430 ZFP30Q9Y2G7 519 aa13.12□□□□□ -0.31
MRPL55-230ENST00000489430 OR4C5Q8NGB2 326 aa13.11□□□□□ -0.31
MRPL55-230ENST00000489430 MBD3L1Q8WWY6 194 aa13.11□□□□□ -0.31
MRPL55-230ENST00000489430 LINC00479Q96M42 142 aa13.11□□□□□ -0.31
MRPL55-230ENST00000489430 ZNF471Q9BX82 626 aaPredicted RBP13.11□□□□□ -0.31
MRPL55-230ENST00000489430 C11orf21Q9P2W6 132 aa13.11□□□□□ -0.31
MRPL55-230ENST00000489430 FABP5P3A8MUU1 101 aa13.1□□□□□ -0.31
MRPL55-230ENST00000489430 NEGR1Q7Z3B1 354 aa13.1□□□□□ -0.31
MRPL55-230ENST00000489430 FMC1Q96HJ9 113 aa13.1□□□□□ -0.31
MRPL55-230ENST00000489430 TRAV34A0A0B4J273 112 aa13.09□□□□□ -0.31
MRPL55-230ENST00000489430 TRBV6-1A0A0K0K1D8 114 aa13.09□□□□□ -0.31
MRPL55-230ENST00000489430 SFTA3P0C7M3 94 aa13.09□□□□□ -0.31
MRPL55-230ENST00000489430 ZNF876PQ49A33 203 aa13.09□□□□□ -0.31
MRPL55-230ENST00000489430 PIK3CD-AS1Q5SR53 167 aa13.09□□□□□ -0.31
MRPL55-230ENST00000489430 Q86TA4 180 aa13.09□□□□□ -0.31
MRPL55-230ENST00000489430 PCNPQ8WW12 178 aaKnown RBP13.09□□□□□ -0.31
MRPL55-230ENST00000489430 C9orf85Q96MD7 179 aa13.09□□□□□ -0.31
MRPL55-230ENST00000489430 C9JCJ5 164 aa13.08□□□□□ -0.32
MRPL55-230ENST00000489430 TPT1P13693 172 aaKnown RBP13.08□□□□□ -0.32
MRPL55-230ENST00000489430 LGALSLQ3ZCW2 172 aaPredicted RBP13.08□□□□□ -0.32
MRPL55-230ENST00000489430 SH2D6Q7Z4S9 175 aa13.08□□□□□ -0.32
MRPL55-230ENST00000489430 SFT2D1Q8WV19 159 aa13.08□□□□□ -0.32
MRPL55-230ENST00000489430 K7EQD1 137 aa13.07□□□□□ -0.32
MRPL55-230ENST00000489430 PFDN1O60925 122 aa13.07□□□□□ -0.32
MRPL55-230ENST00000489430 SRIP30626 198 aa13.07□□□□□ -0.32
MRPL55-230ENST00000489430 LYPD5Q6UWN5 251 aa13.07□□□□□ -0.32
MRPL55-230ENST00000489430 TMUB2Q71RG4 321 aa13.07□□□□□ -0.32
MRPL55-230ENST00000489430 FAM213BQ8TBF2 198 aa13.07□□□□□ -0.32
MRPL55-230ENST00000489430 TXNDC17Q9BRA2 123 aa13.07□□□□□ -0.32
MRPL55-230ENST00000489430 K7EP13 123 aa13.06□□□□□ -0.32
MRPL55-230ENST00000489430 S100A9P06702 114 aaKnown RBP13.06□□□□□ -0.32
MRPL55-230ENST00000489430 RNASE3P12724 160 aaKnown RBP13.06□□□□□ -0.32
MRPL55-230ENST00000489430 UBE2G1P62253 170 aa13.06□□□□□ -0.32
MRPL55-230ENST00000489430 CST9LP1Q5W188 147 aa13.06□□□□□ -0.32
MRPL55-230ENST00000489430 EIF5AL1Q6IS14 154 aaKnown RBP13.06□□□□□ -0.32
MRPL55-230ENST00000489430 TCTE3Q8IZS6 198 aa13.06□□□□□ -0.32
MRPL55-230ENST00000489430 IGKV3D-20A0A0C4DH25 116 aa13.05□□□□□ -0.32
MRPL55-230ENST00000489430 SIVA1O15304 175 aa13.05□□□□□ -0.32
MRPL55-230ENST00000489430 GYPEP15421 78 aa13.05□□□□□ -0.32
MRPL55-230ENST00000489430 GATA1P15976 413 aaPredicted RBP13.05□□□□□ -0.32
MRPL55-230ENST00000489430 PKHD1P08F94 4074 aa13.04□□□□□ -0.32
MRPL55-230ENST00000489430 RS1O15537 224 aa13.04□□□□□ -0.32
MRPL55-230ENST00000489430 NXPH4O95158 308 aa13.04□□□□□ -0.32
MRPL55-230ENST00000489430 LTAP01374 205 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms