RNA–Protein interactions for RNA: ENST00000489131.1

TOP3A-206, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-206ENST00000489131 M0R2Z0 102 aa9.42□□□□□ -0.9
TOP3A-206ENST00000489131 ORM1P02763 201 aa9.42□□□□□ -0.9
TOP3A-206ENST00000489131 SPINK13Q1W4C9 94 aa9.42□□□□□ -0.9
TOP3A-206ENST00000489131 COX19Q49B96 90 aa9.42□□□□□ -0.9
TOP3A-206ENST00000489131 MORN3Q6PF18 240 aaPredicted RBP9.42□□□□□ -0.9
TOP3A-206ENST00000489131 KCNS1Q96KK3 526 aa9.42□□□□□ -0.9
TOP3A-206ENST00000489131 SRD5A3Q9H8P0 318 aa9.42□□□□□ -0.9
TOP3A-206ENST00000489131 ZMAT5Q9UDW3 170 aaKnown RBP9.42□□□□□ -0.9
TOP3A-206ENST00000489131 SNAI2O43623 268 aa9.41□□□□□ -0.9
TOP3A-206ENST00000489131 IGKV3-20P01619 116 aa9.41□□□□□ -0.9
TOP3A-206ENST00000489131 OR5AL1P0C617 328 aa9.41□□□□□ -0.9
TOP3A-206ENST00000489131 NUTF2P61970 127 aaKnown RBP9.41□□□□□ -0.9
TOP3A-206ENST00000489131 WDR73Q6P4I2 378 aa9.41□□□□□ -0.9
TOP3A-206ENST00000489131 Q6ZQT7 251 aa9.41□□□□□ -0.9
TOP3A-206ENST00000489131 Q8N1Y9 231 aa9.41□□□□□ -0.9
TOP3A-206ENST00000489131 GATD1Q8NB37 220 aa9.41□□□□□ -0.9
TOP3A-206ENST00000489131 AGRNO00468 2067 aa9.41□□□□□ -0.9
TOP3A-206ENST00000489131 A0A1B0GW15 77 aa9.4□□□□□ -0.9
TOP3A-206ENST00000489131 F2Z2F3 143 aa9.4□□□□□ -0.9
TOP3A-206ENST00000489131 TCL1AP56279 114 aa9.4□□□□□ -0.9
TOP3A-206ENST00000489131 ANXA2RQ3ZCQ2 193 aa9.4□□□□□ -0.9
TOP3A-206ENST00000489131 FER1L6-AS1Q8NA97 138 aa9.4□□□□□ -0.9
TOP3A-206ENST00000489131 MDFIQ99750 246 aa9.4□□□□□ -0.9
TOP3A-206ENST00000489131 SCRT2Q9NQ03 307 aa9.4□□□□□ -0.9
TOP3A-206ENST00000489131 TP53TG3Q9ULZ0 132 aa9.4□□□□□ -0.9
TOP3A-206ENST00000489131 IGHV4-4A0A075B6R2 117 aa9.39□□□□□ -0.91
TOP3A-206ENST00000489131 TRAV12-2A0A075B6T6 113 aa9.39□□□□□ -0.91
TOP3A-206ENST00000489131 TRAV12-3A0A0B4J271 114 aa9.39□□□□□ -0.91
TOP3A-206ENST00000489131 A0A1B0GUT8 65 aa9.39□□□□□ -0.91
TOP3A-206ENST00000489131 GIG44P09565 113 aaPredicted RBP9.39□□□□□ -0.91
TOP3A-206ENST00000489131 RBMY1A1P0DJD3 496 aaKnown RBP9.39□□□□□ -0.91
TOP3A-206ENST00000489131 RBMY1CP0DJD4 496 aa9.39□□□□□ -0.91
TOP3A-206ENST00000489131 GZMBP10144 247 aa9.39□□□□□ -0.91
TOP3A-206ENST00000489131 RBMY1FQ15415 496 aaKnown RBP9.39□□□□□ -0.91
TOP3A-206ENST00000489131 TMEM256Q8N2U0 113 aa9.39□□□□□ -0.91
TOP3A-206ENST00000489131 GNB1LQ9BYB4 327 aa9.39□□□□□ -0.91
TOP3A-206ENST00000489131 IGHV1OR15-1A0A075B7D0 117 aa9.38□□□□□ -0.91
TOP3A-206ENST00000489131 J3KRW8 73 aa9.38□□□□□ -0.91
TOP3A-206ENST00000489131 PHOX2AO14813 284 aa9.38□□□□□ -0.91
TOP3A-206ENST00000489131 INSP01308 110 aa9.38□□□□□ -0.91
TOP3A-206ENST00000489131 MT-ND6P03923 174 aa9.38□□□□□ -0.91
TOP3A-206ENST00000489131 FAM159AQ6UWV7 190 aa9.38□□□□□ -0.91
TOP3A-206ENST00000489131 C1QTNF4Q9BXJ3 329 aa9.38□□□□□ -0.91
TOP3A-206ENST00000489131 WFDC10AQ9H1F0 79 aa9.38□□□□□ -0.91
TOP3A-206ENST00000489131 ANK2Q01484 3957 aa9.37□□□□□ -0.91
TOP3A-206ENST00000489131 TMSB15BA0A087X1C1 80 aa9.37□□□□□ -0.91
TOP3A-206ENST00000489131 NXPH4O95158 308 aa9.37□□□□□ -0.91
TOP3A-206ENST00000489131 ASIPP42127 132 aa9.37□□□□□ -0.91
TOP3A-206ENST00000489131 HBBP68871 147 aa9.37□□□□□ -0.91
TOP3A-206ENST00000489131 SAMD5Q5TGI4 173 aa9.37□□□□□ -0.91
TOP3A-206ENST00000489131 LYZL1Q6UWQ5 148 aa9.37□□□□□ -0.91
TOP3A-206ENST00000489131 DEFB125Q8N687 156 aa9.37□□□□□ -0.91
TOP3A-206ENST00000489131 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.37□□□□□ -0.91
TOP3A-206ENST00000489131 CSNK1G2-AS1Q8NCQ2 148 aa9.37□□□□□ -0.91
TOP3A-206ENST00000489131 PGLYRP4Q96LB8 373 aa9.37□□□□□ -0.91
TOP3A-206ENST00000489131 TRRAPQ9Y4A5 3859 aa9.36□□□□□ -0.91
TOP3A-206ENST00000489131 KIR2DL5BA0A0G2JN68 375 aa9.36□□□□□ -0.91
TOP3A-206ENST00000489131 KIR2DL5BA0A0G2JPC4 375 aa9.36□□□□□ -0.91
TOP3A-206ENST00000489131 A8MZ25 164 aa9.36□□□□□ -0.91
TOP3A-206ENST00000489131 S100A8P05109 93 aa9.36□□□□□ -0.91
TOP3A-206ENST00000489131 ARMS2P0C7Q2 107 aa9.36□□□□□ -0.91
TOP3A-206ENST00000489131 RNASE3P12724 160 aaKnown RBP9.36□□□□□ -0.91
TOP3A-206ENST00000489131 RPS10P46783 165 aaKnown RBP9.36□□□□□ -0.91
TOP3A-206ENST00000489131 CACNG7P62955 275 aa9.36□□□□□ -0.91
TOP3A-206ENST00000489131 RIGQ13278 110 aa9.36□□□□□ -0.91
TOP3A-206ENST00000489131 OXLD1Q5BKU9 147 aa9.36□□□□□ -0.91
TOP3A-206ENST00000489131 ZNF493Q6ZR52 646 aa9.36□□□□□ -0.91
TOP3A-206ENST00000489131 TMEM136Q6ZRR5 245 aa9.36□□□□□ -0.91
TOP3A-206ENST00000489131 KIR2DL5AQ8N109 375 aa9.36□□□□□ -0.91
TOP3A-206ENST00000489131 KIR2DL5BQ8NHK3 375 aa9.36□□□□□ -0.91
TOP3A-206ENST00000489131 C9orf85Q96MD7 179 aa9.36□□□□□ -0.91
TOP3A-206ENST00000489131 TRGV11A0A075B6L2 103 aa9.35□□□□□ -0.91
TOP3A-206ENST00000489131 IGHV3-16A0A0C4DH30 117 aa9.35□□□□□ -0.91
TOP3A-206ENST00000489131 GRIFINA4D1Z8 144 aa9.35□□□□□ -0.91
TOP3A-206ENST00000489131 HLA-DQA1P01909 254 aa9.35□□□□□ -0.91
TOP3A-206ENST00000489131 FRMD6-AS1P0C7T7 363 aa9.35□□□□□ -0.91
TOP3A-206ENST00000489131 FXYD7P58549 80 aa9.35□□□□□ -0.91
TOP3A-206ENST00000489131 MUC21Q5SSG8 566 aa9.35□□□□□ -0.91
TOP3A-206ENST00000489131 MRPL54Q6P161 138 aaKnown RBP9.35□□□□□ -0.91
TOP3A-206ENST00000489131 C1orf158Q8N1D5 194 aa9.35□□□□□ -0.91
TOP3A-206ENST00000489131 BORCS7Q96B45 105 aa9.35□□□□□ -0.91
TOP3A-206ENST00000489131 NAGKQ9UJ70 344 aa9.35□□□□□ -0.91
TOP3A-206ENST00000489131 KRTAP10-11P60412 298 aa9.34□□□□□ -0.91
TOP3A-206ENST00000489131 PIK3CD-AS1Q5SR53 167 aa9.34□□□□□ -0.91
TOP3A-206ENST00000489131 DMRTA1Q5VZB9 504 aa9.34□□□□□ -0.91
TOP3A-206ENST00000489131 ZNF705AQ6ZN79 300 aaPredicted RBP9.34□□□□□ -0.91
TOP3A-206ENST00000489131 PTH2Q96A98 100 aa9.34□□□□□ -0.91
TOP3A-206ENST00000489131 CSTL1Q9H114 145 aa9.34□□□□□ -0.91
TOP3A-206ENST00000489131 XCL2Q9UBD3 114 aa9.34□□□□□ -0.91
TOP3A-206ENST00000489131 NOTCH3Q9UM47 2321 aa9.33□□□□□ -0.92
TOP3A-206ENST00000489131 LOC102724200A0A096LPH7 203 aaPredicted RBP9.33□□□□□ -0.92
TOP3A-206ENST00000489131 SNURFLB1AK76 121 aa9.33□□□□□ -0.92
TOP3A-206ENST00000489131 H3BVH4 76 aa9.33□□□□□ -0.92
TOP3A-206ENST00000489131 GNRH2O43555 120 aa9.33□□□□□ -0.92
TOP3A-206ENST00000489131 SPINK4O60575 86 aa9.33□□□□□ -0.92
TOP3A-206ENST00000489131 TRGC2P03986 189 aa9.33□□□□□ -0.92
TOP3A-206ENST00000489131 KPRPQ5T749 579 aaPredicted RBP9.33□□□□□ -0.92
TOP3A-206ENST00000489131 C1orf196B1AJZ1 125 aa9.32□□□□□ -0.92
TOP3A-206ENST00000489131 NTF3P20783 257 aa9.32□□□□□ -0.92
TOP3A-206ENST00000489131 S100A4P26447 101 aaKnown RBP9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms