RNA–Protein interactions for RNA: ENST00000489130.2

SRRM1-216, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-216ENST00000489130 SFTA3P0C7M3 94 aa8.61□□□□□ -1.03
SRRM1-216ENST00000489130 MRPL23Q16540 153 aaKnown RBP8.61□□□□□ -1.03
SRRM1-216ENST00000489130 INO80EQ8NBZ0 244 aaPredicted RBP8.61□□□□□ -1.03
SRRM1-216ENST00000489130 NDFIP1Q9BT67 221 aa8.61□□□□□ -1.03
SRRM1-216ENST00000489130 TMEM167BQ9NRX6 74 aa8.61□□□□□ -1.03
SRRM1-216ENST00000489130 LRP1BQ9NZR2 4599 aa8.6□□□□□ -1.03
SRRM1-216ENST00000489130 TRAV4A0A0B4J268 109 aa8.6□□□□□ -1.03
SRRM1-216ENST00000489130 TRGV4A0A0C4DH28 118 aa8.6□□□□□ -1.03
SRRM1-216ENST00000489130 C16orf90A8MZG2 172 aa8.6□□□□□ -1.03
SRRM1-216ENST00000489130 GGTLC3B5MD39 225 aa8.6□□□□□ -1.03
SRRM1-216ENST00000489130 K7EQD1 137 aa8.6□□□□□ -1.03
SRRM1-216ENST00000489130 M0R2P5 195 aa8.6□□□□□ -1.03
SRRM1-216ENST00000489130 SIVA1O15304 175 aa8.6□□□□□ -1.03
SRRM1-216ENST00000489130 NXPH4O95158 308 aa8.6□□□□□ -1.03
SRRM1-216ENST00000489130 CXorf1O96002 111 aa8.6□□□□□ -1.03
SRRM1-216ENST00000489130 IGLV2-11P01706 119 aa8.6□□□□□ -1.03
SRRM1-216ENST00000489130 TYMSP04818 313 aa8.6□□□□□ -1.03
SRRM1-216ENST00000489130 RPL7L1Q6DKI1 246 aaKnown RBP8.6□□□□□ -1.03
SRRM1-216ENST00000489130 NEGR1Q7Z3B1 354 aa8.6□□□□□ -1.03
SRRM1-216ENST00000489130 KCNS1Q96KK3 526 aa8.6□□□□□ -1.03
SRRM1-216ENST00000489130 SGK494Q96LW2 274 aa8.6□□□□□ -1.03
SRRM1-216ENST00000489130 ACTR3CQ9C0K3 210 aaPredicted RBP8.6□□□□□ -1.03
SRRM1-216ENST00000489130 SDF2L1Q9HCN8 221 aa8.6□□□□□ -1.03
SRRM1-216ENST00000489130 FXYD6-FXYD2A0A087WZ82 144 aa8.59□□□□□ -1.03
SRRM1-216ENST00000489130 K7EQM0 130 aa8.59□□□□□ -1.03
SRRM1-216ENST00000489130 LINC00315P59091 139 aa8.59□□□□□ -1.03
SRRM1-216ENST00000489130 SUMO1P63165 101 aaKnown RBP8.59□□□□□ -1.03
SRRM1-216ENST00000489130 LYPD5Q6UWN5 251 aa8.59□□□□□ -1.03
SRRM1-216ENST00000489130 OR2T35Q8NGX2 323 aa8.59□□□□□ -1.03
SRRM1-216ENST00000489130 EPDR1Q9UM22 224 aa8.59□□□□□ -1.03
SRRM1-216ENST00000489130 PSG8Q9UQ74 426 aa8.59□□□□□ -1.03
SRRM1-216ENST00000489130 HSPG2P98160 4391 aa8.58□□□□□ -1.04
SRRM1-216ENST00000489130 BORCS7-ASMTA0A0B4J1R7 106 aa8.58□□□□□ -1.04
SRRM1-216ENST00000489130 FBLL1A6NHQ2 334 aaKnown RBP8.58□□□□□ -1.04
SRRM1-216ENST00000489130 G3V3Q6 166 aa8.58□□□□□ -1.04
SRRM1-216ENST00000489130 ORM1P02763 201 aa8.58□□□□□ -1.04
SRRM1-216ENST00000489130 SRIP30626 198 aa8.58□□□□□ -1.04
SRRM1-216ENST00000489130 ZNF80P51504 273 aaPredicted RBP8.58□□□□□ -1.04
SRRM1-216ENST00000489130 FLI1Q01543 452 aaPredicted RBP8.58□□□□□ -1.04
SRRM1-216ENST00000489130 CYB561D1Q8N8Q1 229 aa8.58□□□□□ -1.04
SRRM1-216ENST00000489130 TMEM75Q8N9X5 138 aa8.58□□□□□ -1.04
SRRM1-216ENST00000489130 OR4C5Q8NGB2 326 aa8.58□□□□□ -1.04
SRRM1-216ENST00000489130 PCNPQ8WW12 178 aaKnown RBP8.58□□□□□ -1.04
SRRM1-216ENST00000489130 A0A1W2PRE2 83 aa8.57□□□□□ -1.04
SRRM1-216ENST00000489130 C9JCJ5 164 aa8.57□□□□□ -1.04
SRRM1-216ENST00000489130 PFN1P07737 140 aaKnown RBP8.57□□□□□ -1.04
SRRM1-216ENST00000489130 GYPEP15421 78 aa8.57□□□□□ -1.04
SRRM1-216ENST00000489130 ZNF726P1Q15940 193 aa8.57□□□□□ -1.04
SRRM1-216ENST00000489130 RGS21Q2M5E4 152 aa8.57□□□□□ -1.04
SRRM1-216ENST00000489130 LCE2AQ5TA79 106 aaPredicted RBP8.57□□□□□ -1.04
SRRM1-216ENST00000489130 Q6ZRN7 208 aaPredicted RBP8.57□□□□□ -1.04
SRRM1-216ENST00000489130 SPATA12Q7Z6I5 190 aa8.57□□□□□ -1.04
SRRM1-216ENST00000489130 C11orf21Q9P2W6 132 aa8.57□□□□□ -1.04
SRRM1-216ENST00000489130 CTXND1A0A1B0GTU2 59 aa8.56□□□□□ -1.04
SRRM1-216ENST00000489130 TAAR5O14804 337 aa8.56□□□□□ -1.04
SRRM1-216ENST00000489130 CDK2AP2O75956 126 aa8.56□□□□□ -1.04
SRRM1-216ENST00000489130 GCGP01275 180 aa8.56□□□□□ -1.04
SRRM1-216ENST00000489130 ZFP69Q49AA0 526 aa8.56□□□□□ -1.04
SRRM1-216ENST00000489130 SMUG1Q53HV7 270 aa8.56□□□□□ -1.04
SRRM1-216ENST00000489130 PRNTQ86SH4 94 aa8.56□□□□□ -1.04
SRRM1-216ENST00000489130 TXNDC17Q9BRA2 123 aa8.56□□□□□ -1.04
SRRM1-216ENST00000489130 GATA1P15976 413 aaPredicted RBP8.55□□□□□ -1.04
SRRM1-216ENST00000489130 ZNF876PQ49A33 203 aa8.55□□□□□ -1.04
SRRM1-216ENST00000489130 SAPCD1Q5SSQ6 148 aa8.55□□□□□ -1.04
SRRM1-216ENST00000489130 C9orf85Q96MD7 179 aa8.55□□□□□ -1.04
SRRM1-216ENST00000489130 K7EP13 123 aa8.54□□□□□ -1.04
SRRM1-216ENST00000489130 ARPC5O15511 151 aa8.54□□□□□ -1.04
SRRM1-216ENST00000489130 CIDEAO60543 219 aa8.54□□□□□ -1.04
SRRM1-216ENST00000489130 DNAH10OSP0CZ25 163 aa8.54□□□□□ -1.04
SRRM1-216ENST00000489130 KRTAP10-2P60368 255 aa8.54□□□□□ -1.04
SRRM1-216ENST00000489130 AKR1C8PQ5T2L2 129 aa8.54□□□□□ -1.04
SRRM1-216ENST00000489130 CFAP126Q5VTH2 177 aa8.54□□□□□ -1.04
SRRM1-216ENST00000489130 SH2D6Q7Z4S9 175 aa8.54□□□□□ -1.04
SRRM1-216ENST00000489130 WFDC10BQ8IUB3 73 aa8.54□□□□□ -1.04
SRRM1-216ENST00000489130 PTH2Q96A98 100 aa8.54□□□□□ -1.04
SRRM1-216ENST00000489130 LINC00479Q96M42 142 aa8.54□□□□□ -1.04
SRRM1-216ENST00000489130 NKX6-2Q9C056 277 aaPredicted RBP8.54□□□□□ -1.04
SRRM1-216ENST00000489130 CYTL1Q9NRR1 136 aa8.54□□□□□ -1.04
SRRM1-216ENST00000489130 LY96Q9Y6Y9 160 aa8.54□□□□□ -1.04
SRRM1-216ENST00000489130 TRAV9-2A0A087WT02 112 aa8.53□□□□□ -1.04
SRRM1-216ENST00000489130 LOC100131303A0A0U1RQF7 123 aa8.53□□□□□ -1.04
SRRM1-216ENST00000489130 FAM74A7A6NL05 159 aa8.53□□□□□ -1.04
SRRM1-216ENST00000489130 RS1O15537 224 aa8.53□□□□□ -1.04
SRRM1-216ENST00000489130 RNASE3P12724 160 aaKnown RBP8.53□□□□□ -1.04
SRRM1-216ENST00000489130 TIRAPP58753 221 aa8.53□□□□□ -1.04
SRRM1-216ENST00000489130 DPPA3Q6W0C5 159 aa8.53□□□□□ -1.04
SRRM1-216ENST00000489130 NFE4Q86UQ8 179 aa8.53□□□□□ -1.04
SRRM1-216ENST00000489130 ARL2-SNX15V9GYD0 113 aa8.53□□□□□ -1.04
SRRM1-216ENST00000489130 DNAH5Q8TE73 4624 aa8.52□□□□□ -1.05
SRRM1-216ENST00000489130 TRAV34A0A0B4J273 112 aa8.52□□□□□ -1.05
SRRM1-216ENST00000489130 IGKV3D-20A0A0C4DH25 116 aa8.52□□□□□ -1.05
SRRM1-216ENST00000489130 PEX7O00628 323 aa8.52□□□□□ -1.05
SRRM1-216ENST00000489130 IFNA7P01567 189 aa8.52□□□□□ -1.05
SRRM1-216ENST00000489130 PPT1P50897 306 aa8.52□□□□□ -1.05
SRRM1-216ENST00000489130 FGF8P55075 233 aaPredicted RBP8.52□□□□□ -1.05
SRRM1-216ENST00000489130 UBE2G2P60604 165 aa8.52□□□□□ -1.05
SRRM1-216ENST00000489130 ZNF506Q5JVG8 444 aa8.52□□□□□ -1.05
SRRM1-216ENST00000489130 SLC25A29Q8N8R3 303 aa8.52□□□□□ -1.05
SRRM1-216ENST00000489130 HIST1H2BAQ96A08 127 aa8.52□□□□□ -1.05
SRRM1-216ENST00000489130 TNFRSF18Q9Y5U5 241 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms