RNA–Protein interactions for RNA: ENST00000489045.5

COL9A3-213, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-213ENST00000489045 TYMSP04818 313 aa15.77■□□□□ 0.12
COL9A3-213ENST00000489045 IQCF2Q8IXL9 164 aa15.77■□□□□ 0.12
COL9A3-213ENST00000489045 NDFIP1Q9BT67 221 aa15.77■□□□□ 0.12
COL9A3-213ENST00000489045 FXYD6-FXYD2A0A087WZ82 144 aa15.76■□□□□ 0.11
COL9A3-213ENST00000489045 RPL7L1Q6DKI1 246 aaKnown RBP15.76■□□□□ 0.11
COL9A3-213ENST00000489045 LYPD5Q6UWN5 251 aa15.76■□□□□ 0.11
COL9A3-213ENST00000489045 ACTR3CQ9C0K3 210 aaPredicted RBP15.76■□□□□ 0.11
COL9A3-213ENST00000489045 SDF2L1Q9HCN8 221 aa15.76■□□□□ 0.11
COL9A3-213ENST00000489045 TNFSF18Q9UNG2 199 aa15.76■□□□□ 0.11
COL9A3-213ENST00000489045 TRAV4A0A0B4J268 109 aa15.75■□□□□ 0.11
COL9A3-213ENST00000489045 GGTLC3B5MD39 225 aa15.75■□□□□ 0.11
COL9A3-213ENST00000489045 M0R2P5 195 aa15.75■□□□□ 0.11
COL9A3-213ENST00000489045 CXorf1O96002 111 aa15.75■□□□□ 0.11
COL9A3-213ENST00000489045 BTF3P20290 206 aaKnown RBP15.75■□□□□ 0.11
COL9A3-213ENST00000489045 LINC00315P59091 139 aa15.75■□□□□ 0.11
COL9A3-213ENST00000489045 NEGR1Q7Z3B1 354 aa15.75■□□□□ 0.11
COL9A3-213ENST00000489045 KCNS1Q96KK3 526 aa15.75■□□□□ 0.11
COL9A3-213ENST00000489045 TMEM167BQ9NRX6 74 aa15.75■□□□□ 0.11
COL9A3-213ENST00000489045 RYR1P21817 5038 aa15.75■□□□□ 0.11
COL9A3-213ENST00000489045 K7EQD1 137 aa15.74■□□□□ 0.11
COL9A3-213ENST00000489045 K7EQM0 130 aa15.74■□□□□ 0.11
COL9A3-213ENST00000489045 SUMO1P63165 101 aaKnown RBP15.74■□□□□ 0.11
COL9A3-213ENST00000489045 PSG8Q9UQ74 426 aa15.74■□□□□ 0.11
COL9A3-213ENST00000489045 GYPEP15421 78 aa15.73■□□□□ 0.11
COL9A3-213ENST00000489045 SRIP30626 198 aa15.73■□□□□ 0.11
COL9A3-213ENST00000489045 ZNF80P51504 273 aaPredicted RBP15.73■□□□□ 0.11
COL9A3-213ENST00000489045 SPATA12Q7Z6I5 190 aa15.73■□□□□ 0.11
COL9A3-213ENST00000489045 OR4C5Q8NGB2 326 aa15.73■□□□□ 0.11
COL9A3-213ENST00000489045 OR2T35Q8NGX2 323 aa15.73■□□□□ 0.11
COL9A3-213ENST00000489045 PCNPQ8WW12 178 aaKnown RBP15.73■□□□□ 0.11
COL9A3-213ENST00000489045 BORCS7-ASMTA0A0B4J1R7 106 aa15.72■□□□□ 0.11
COL9A3-213ENST00000489045 IGLV2-11P01706 119 aa15.72■□□□□ 0.11
COL9A3-213ENST00000489045 ORM1P02763 201 aa15.72■□□□□ 0.11
COL9A3-213ENST00000489045 C11orf21Q9P2W6 132 aa15.72■□□□□ 0.11
COL9A3-213ENST00000489045 EPDR1Q9UM22 224 aa15.72■□□□□ 0.11
COL9A3-213ENST00000489045 GCGP01275 180 aa15.71■□□□□ 0.11
COL9A3-213ENST00000489045 FLI1Q01543 452 aaPredicted RBP15.71■□□□□ 0.11
COL9A3-213ENST00000489045 CYB561D1Q8N8Q1 229 aa15.71■□□□□ 0.11
COL9A3-213ENST00000489045 LRP1BQ9NZR2 4599 aa15.71■□□□□ 0.11
COL9A3-213ENST00000489045 ZNF726P1Q15940 193 aa15.7■□□□□ 0.1
COL9A3-213ENST00000489045 Q6ZRN7 208 aaPredicted RBP15.7■□□□□ 0.1
COL9A3-213ENST00000489045 PRNTQ86SH4 94 aa15.7■□□□□ 0.1
COL9A3-213ENST00000489045 C9JCJ5 164 aa15.69■□□□□ 0.1
COL9A3-213ENST00000489045 ZFP69Q49AA0 526 aa15.69■□□□□ 0.1
COL9A3-213ENST00000489045 TMEM75Q8N9X5 138 aa15.69■□□□□ 0.1
COL9A3-213ENST00000489045 CTXND1A0A1B0GTU2 59 aa15.68■□□□□ 0.1
COL9A3-213ENST00000489045 A0A1W2PRE2 83 aa15.68■□□□□ 0.1
COL9A3-213ENST00000489045 G3V3Q6 166 aa15.68■□□□□ 0.1
COL9A3-213ENST00000489045 TAAR5O14804 337 aa15.68■□□□□ 0.1
COL9A3-213ENST00000489045 PFN1P07737 140 aaKnown RBP15.68■□□□□ 0.1
COL9A3-213ENST00000489045 RGS21Q2M5E4 152 aa15.68■□□□□ 0.1
COL9A3-213ENST00000489045 SMUG1Q53HV7 270 aa15.68■□□□□ 0.1
COL9A3-213ENST00000489045 TXNDC17Q9BRA2 123 aa15.68■□□□□ 0.1
COL9A3-213ENST00000489045 LOC100131303A0A0U1RQF7 123 aa15.67■□□□□ 0.1
COL9A3-213ENST00000489045 CDK2AP2O75956 126 aa15.67■□□□□ 0.1
COL9A3-213ENST00000489045 KRTAP10-2P60368 255 aa15.67■□□□□ 0.1
COL9A3-213ENST00000489045 WFDC10BQ8IUB3 73 aa15.67■□□□□ 0.1
COL9A3-213ENST00000489045 HSPG2P98160 4391 aa15.67■□□□□ 0.1
COL9A3-213ENST00000489045 FBLL1A6NHQ2 334 aaKnown RBP15.66■□□□□ 0.1
COL9A3-213ENST00000489045 GATA1P15976 413 aaPredicted RBP15.66■□□□□ 0.1
COL9A3-213ENST00000489045 ZNF876PQ49A33 203 aa15.66■□□□□ 0.1
COL9A3-213ENST00000489045 LINC00479Q96M42 142 aa15.66■□□□□ 0.1
COL9A3-213ENST00000489045 TNFRSF18Q9Y5U5 241 aa15.66■□□□□ 0.1
COL9A3-213ENST00000489045 LY96Q9Y6Y9 160 aa15.66■□□□□ 0.1
COL9A3-213ENST00000489045 TRAV34A0A0B4J273 112 aa15.65■□□□□ 0.1
COL9A3-213ENST00000489045 UBE2G2P60604 165 aa15.65■□□□□ 0.1
COL9A3-213ENST00000489045 SAPCD1Q5SSQ6 148 aa15.65■□□□□ 0.1
COL9A3-213ENST00000489045 C9orf85Q96MD7 179 aa15.65■□□□□ 0.1
COL9A3-213ENST00000489045 ARPC5O15511 151 aa15.64■□□□□ 0.09
COL9A3-213ENST00000489045 IFNA7P01567 189 aa15.64■□□□□ 0.09
COL9A3-213ENST00000489045 FGF8P55075 233 aaPredicted RBP15.64■□□□□ 0.09
COL9A3-213ENST00000489045 AKR1C8PQ5T2L2 129 aa15.64■□□□□ 0.09
COL9A3-213ENST00000489045 DPPA3Q6W0C5 159 aa15.64■□□□□ 0.09
COL9A3-213ENST00000489045 TRAV9-2A0A087WT02 112 aa15.63■□□□□ 0.09
COL9A3-213ENST00000489045 RS1O15537 224 aa15.63■□□□□ 0.09
COL9A3-213ENST00000489045 CFAP126Q5VTH2 177 aa15.63■□□□□ 0.09
COL9A3-213ENST00000489045 NHLRC2Q8NBF2 726 aa15.63■□□□□ 0.09
COL9A3-213ENST00000489045 ARL2-SNX15V9GYD0 113 aa15.63■□□□□ 0.09
COL9A3-213ENST00000489045 PPT1P50897 306 aa15.62■□□□□ 0.09
COL9A3-213ENST00000489045 SH2D6Q7Z4S9 175 aa15.62■□□□□ 0.09
COL9A3-213ENST00000489045 CYTL1Q9NRR1 136 aa15.62■□□□□ 0.09
COL9A3-213ENST00000489045 DNAH5Q8TE73 4624 aa15.61■□□□□ 0.09
COL9A3-213ENST00000489045 PGPEP1LA6NFU8 196 aa15.61■□□□□ 0.09
COL9A3-213ENST00000489045 FAM74A7A6NL05 159 aa15.61■□□□□ 0.09
COL9A3-213ENST00000489045 PEX7O00628 323 aa15.61■□□□□ 0.09
COL9A3-213ENST00000489045 DNAH10OSP0CZ25 163 aa15.61■□□□□ 0.09
COL9A3-213ENST00000489045 RNASE3P12724 160 aaKnown RBP15.61■□□□□ 0.09
COL9A3-213ENST00000489045 ZNF506Q5JVG8 444 aa15.61■□□□□ 0.09
COL9A3-213ENST00000489045 Q86TA4 180 aa15.61■□□□□ 0.09
COL9A3-213ENST00000489045 NFE4Q86UQ8 179 aa15.61■□□□□ 0.09
COL9A3-213ENST00000489045 SLC25A29Q8N8R3 303 aa15.61■□□□□ 0.09
COL9A3-213ENST00000489045 KRTAP4-5Q9BYR2 181 aa15.61■□□□□ 0.09
COL9A3-213ENST00000489045 ABCA13Q86UQ4 5058 aa15.61■□□□□ 0.09
COL9A3-213ENST00000489045 IGHV3-73A0A0B4J1V6 119 aa15.6■□□□□ 0.09
COL9A3-213ENST00000489045 EVI2AP22794 236 aa15.6■□□□□ 0.09
COL9A3-213ENST00000489045 APOBP04114 4563 aaKnown RBP15.6■□□□□ 0.09
COL9A3-213ENST00000489045 MAP1LC3B2A6NCE7 125 aa15.59■□□□□ 0.09
COL9A3-213ENST00000489045 SMLR1H3BR10 107 aa15.59■□□□□ 0.09
COL9A3-213ENST00000489045 CIDEAO60543 219 aa15.59■□□□□ 0.09
COL9A3-213ENST00000489045 ERVFC1-1P60608 527 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms