RNA–Protein interactions for RNA: ENST00000489030.1

USP11-210, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 2

Gene USP11, Length 340 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-210ENST00000489030 ZNF727A8MUV8 499 aa8.18□□□□□ -1.1
USP11-210ENST00000489030 KLLNB2CW77 178 aa8.18□□□□□ -1.1
USP11-210ENST00000489030 C9JCJ5 164 aa8.18□□□□□ -1.1
USP11-210ENST00000489030 C9JQL5 133 aa8.18□□□□□ -1.1
USP11-210ENST00000489030 RNASE4P34096 147 aaKnown RBP8.18□□□□□ -1.1
USP11-210ENST00000489030 SOHLH1Q5JUK2 328 aa8.18□□□□□ -1.1
USP11-210ENST00000489030 COX8CQ7Z4L0 72 aa8.18□□□□□ -1.1
USP11-210ENST00000489030 TVP23CQ96ET8 276 aa8.18□□□□□ -1.1
USP11-210ENST00000489030 IGF2BP2-AS1Q96M15 143 aa8.18□□□□□ -1.1
USP11-210ENST00000489030 SMIM7Q9BQ49 75 aa8.18□□□□□ -1.1
USP11-210ENST00000489030 C20orf144Q9BQM9 153 aa8.18□□□□□ -1.1
USP11-210ENST00000489030 BIN3Q9NQY0 253 aa8.18□□□□□ -1.1
USP11-210ENST00000489030 XCL2Q9UBD3 114 aa8.18□□□□□ -1.1
USP11-210ENST00000489030 TRAV12-2A0A075B6T6 113 aa8.17□□□□□ -1.1
USP11-210ENST00000489030 DEFB131BA0A096LNP1 70 aa8.17□□□□□ -1.1
USP11-210ENST00000489030 C7orf71A4D174 169 aa8.17□□□□□ -1.1
USP11-210ENST00000489030 J3KRW8 73 aa8.17□□□□□ -1.1
USP11-210ENST00000489030 INSP01308 110 aa8.17□□□□□ -1.1
USP11-210ENST00000489030 MIFP14174 115 aa8.17□□□□□ -1.1
USP11-210ENST00000489030 CENPWQ5EE01 88 aa8.17□□□□□ -1.1
USP11-210ENST00000489030 Q6ZR54 194 aa8.17□□□□□ -1.1
USP11-210ENST00000489030 ZFAND2AQ8N6M9 145 aa8.17□□□□□ -1.1
USP11-210ENST00000489030 C8orf49Q96NF6 230 aa8.17□□□□□ -1.1
USP11-210ENST00000489030 NIPSNAP3BQ9BS92 247 aa8.17□□□□□ -1.1
USP11-210ENST00000489030 MLST8Q9BVC4 326 aa8.17□□□□□ -1.1
USP11-210ENST00000489030 LY96Q9Y6Y9 160 aa8.17□□□□□ -1.1
USP11-210ENST00000489030 TRAV12-3A0A0B4J271 114 aa8.16□□□□□ -1.1
USP11-210ENST00000489030 TRAV21A0A0B4J279 112 aa8.16□□□□□ -1.1
USP11-210ENST00000489030 FABP5P3A8MUU1 101 aa8.16□□□□□ -1.1
USP11-210ENST00000489030 CRXO43186 299 aaPredicted RBP8.16□□□□□ -1.1
USP11-210ENST00000489030 GCGP01275 180 aa8.16□□□□□ -1.1
USP11-210ENST00000489030 SFTA3P0C7M3 94 aa8.16□□□□□ -1.1
USP11-210ENST00000489030 TMEM241Q24JQ0 296 aa8.16□□□□□ -1.1
USP11-210ENST00000489030 GFI1BQ5VTD9 330 aa8.16□□□□□ -1.1
USP11-210ENST00000489030 TMEM256Q8N2U0 113 aa8.16□□□□□ -1.1
USP11-210ENST00000489030 GOLT1BQ9Y3E0 138 aa8.16□□□□□ -1.1
USP11-210ENST00000489030 TMEM218A2RU14 115 aa8.15□□□□□ -1.1
USP11-210ENST00000489030 ZNF324O75467 553 aaPredicted RBP8.15□□□□□ -1.1
USP11-210ENST00000489030 MGST1P10620 155 aaKnown RBP8.15□□□□□ -1.1
USP11-210ENST00000489030 BTN1A1Q13410 526 aa8.15□□□□□ -1.1
USP11-210ENST00000489030 KIR3DS1Q14943 382 aa8.15□□□□□ -1.1
USP11-210ENST00000489030 LGALS9BQ3B8N2 356 aa8.15□□□□□ -1.1
USP11-210ENST00000489030 Q6AWC8 147 aa8.15□□□□□ -1.1
USP11-210ENST00000489030 NHLRC2Q8NBF2 726 aa8.15□□□□□ -1.1
USP11-210ENST00000489030 OCC1Q8TAD7 63 aa8.15□□□□□ -1.1
USP11-210ENST00000489030 DAZAP1Q96EP5 407 aaKnown RBP8.15□□□□□ -1.1
USP11-210ENST00000489030 ZC2HC1AQ96GY0 325 aa8.15□□□□□ -1.1
USP11-210ENST00000489030 TMEM208Q9BTX3 173 aa8.15□□□□□ -1.1
USP11-210ENST00000489030 NAT8Q9UHE5 227 aa8.15□□□□□ -1.1
USP11-210ENST00000489030 LRP1BQ9NZR2 4599 aa8.15□□□□□ -1.11
USP11-210ENST00000489030 TRBV20OR9-2A0A075B6H5 130 aa8.14□□□□□ -1.11
USP11-210ENST00000489030 F8W036 122 aa8.14□□□□□ -1.11
USP11-210ENST00000489030 H7BYZ3 331 aa8.14□□□□□ -1.11
USP11-210ENST00000489030 IGLV2-8P01709 118 aa8.14□□□□□ -1.11
USP11-210ENST00000489030 PFN1P07737 140 aaKnown RBP8.14□□□□□ -1.11
USP11-210ENST00000489030 FAM162BQ5T6X4 162 aa8.14□□□□□ -1.11
USP11-210ENST00000489030 PRR9Q5T870 116 aa8.14□□□□□ -1.11
USP11-210ENST00000489030 LINC01587Q99440 93 aa8.14□□□□□ -1.11
USP11-210ENST00000489030 IGHV3OR16-12A0A075B7B8 117 aa8.13□□□□□ -1.11
USP11-210ENST00000489030 PGPEP1LA6NFU8 196 aa8.13□□□□□ -1.11
USP11-210ENST00000489030 P0DMU3 169 aa8.13□□□□□ -1.11
USP11-210ENST00000489030 FAM231AP0DMU4 169 aa8.13□□□□□ -1.11
USP11-210ENST00000489030 FAM231CP0DMU5 169 aa8.13□□□□□ -1.11
USP11-210ENST00000489030 CRIP1P50238 77 aa8.13□□□□□ -1.11
USP11-210ENST00000489030 ZNF80P51504 273 aaPredicted RBP8.13□□□□□ -1.11
USP11-210ENST00000489030 PRR27Q6MZM9 219 aa8.13□□□□□ -1.11
USP11-210ENST00000489030 FAM159AQ6UWV7 190 aa8.13□□□□□ -1.11
USP11-210ENST00000489030 C1orf158Q8N1D5 194 aa8.13□□□□□ -1.11
USP11-210ENST00000489030 KCNS1Q96KK3 526 aa8.13□□□□□ -1.11
USP11-210ENST00000489030 PYGO2Q9BRQ0 406 aa8.13□□□□□ -1.11
USP11-210ENST00000489030 NDUFAF3Q9BU61 184 aa8.13□□□□□ -1.11
USP11-210ENST00000489030 SEC11CQ9BY50 192 aa8.13□□□□□ -1.11
USP11-210ENST00000489030 SDF2L1Q9HCN8 221 aa8.13□□□□□ -1.11
USP11-210ENST00000489030 IGHV1OR15-1A0A075B7D0 117 aa8.12□□□□□ -1.11
USP11-210ENST00000489030 SMIM9A6NGZ8 99 aa8.12□□□□□ -1.11
USP11-210ENST00000489030 ZNF705AQ6ZN79 300 aaPredicted RBP8.12□□□□□ -1.11
USP11-210ENST00000489030 LINC01551Q86U37 167 aa8.12□□□□□ -1.11
USP11-210ENST00000489030 SLC7A5P1Q8MH63 180 aa8.12□□□□□ -1.11
USP11-210ENST00000489030 NEU1Q99519 415 aa8.12□□□□□ -1.11
USP11-210ENST00000489030 LINC00467Q9BRT7 94 aa8.12□□□□□ -1.11
USP11-210ENST00000489030 HERC1Q15751 4861 aa8.12□□□□□ -1.11
USP11-210ENST00000489030 NACAE9PAV3 2078 aa8.12□□□□□ -1.11
USP11-210ENST00000489030 KRBOX1C9JBD0 128 aa8.11□□□□□ -1.11
USP11-210ENST00000489030 K7EN84 100 aa8.11□□□□□ -1.11
USP11-210ENST00000489030 SH2D1AO60880 128 aa8.11□□□□□ -1.11
USP11-210ENST00000489030 ORM1P02763 201 aa8.11□□□□□ -1.11
USP11-210ENST00000489030 EMP1P54849 157 aa8.11□□□□□ -1.11
USP11-210ENST00000489030 RPL23P62829 140 aaKnown RBP8.11□□□□□ -1.11
USP11-210ENST00000489030 TNP2Q05952 138 aa8.11□□□□□ -1.11
USP11-210ENST00000489030 PNRC1Q12796 327 aaPredicted RBP8.11□□□□□ -1.11
USP11-210ENST00000489030 OR5I1Q13606 314 aa8.11□□□□□ -1.11
USP11-210ENST00000489030 C19orf71A6NCJ1 209 aa8.1□□□□□ -1.11
USP11-210ENST00000489030 P01737 135 aa8.1□□□□□ -1.11
USP11-210ENST00000489030 HTN1P15515 57 aa8.1□□□□□ -1.11
USP11-210ENST00000489030 ERVFC1-1P60608 527 aa8.1□□□□□ -1.11
USP11-210ENST00000489030 ADIRFQ15847 76 aa8.1□□□□□ -1.11
USP11-210ENST00000489030 RRN3P1Q2M238 152 aa8.1□□□□□ -1.11
USP11-210ENST00000489030 TDRG1Q3Y452 100 aa8.1□□□□□ -1.11
USP11-210ENST00000489030 ANXA2RQ3ZCQ2 193 aa8.1□□□□□ -1.11
USP11-210ENST00000489030 C10orf91Q5T1B1 145 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms