RNA–Protein interactions for RNA: ENST00000488934.1

SF3A3-207, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 5

Gene SF3A3, Length 273 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-207ENST00000488934 WFDC1Q9HC57 220 aa3.63□□□□□ -1.83
SF3A3-207ENST00000488934 ZNF492Q9P255 531 aa3.63□□□□□ -1.83
SF3A3-207ENST00000488934 STARD9Q9P2P6 4700 aa3.63□□□□□ -1.83
SF3A3-207ENST00000488934 IGKV2-40A0A087WW87 121 aaPredicted RBP3.62□□□□□ -1.83
SF3A3-207ENST00000488934 TRAV12-3A0A0B4J271 114 aa3.62□□□□□ -1.83
SF3A3-207ENST00000488934 CTXND1A0A1B0GTU2 59 aa3.62□□□□□ -1.83
SF3A3-207ENST00000488934 KANTRA0A1W2PQU2 76 aa3.62□□□□□ -1.83
SF3A3-207ENST00000488934 A0A1W2PRE2 83 aa3.62□□□□□ -1.83
SF3A3-207ENST00000488934 PGPA6NDG6 321 aa3.62□□□□□ -1.83
SF3A3-207ENST00000488934 CBY3A6NI87 242 aa3.62□□□□□ -1.83
SF3A3-207ENST00000488934 HMSDA8MTL9 139 aa3.62□□□□□ -1.83
SF3A3-207ENST00000488934 UMAD1C9J7I0 102 aa3.62□□□□□ -1.83
SF3A3-207ENST00000488934 J3KRW8 73 aa3.62□□□□□ -1.83
SF3A3-207ENST00000488934 IGKV2D-40P01614 121 aaPredicted RBP3.62□□□□□ -1.83
SF3A3-207ENST00000488934 CT45A10P0DMU9 189 aa3.62□□□□□ -1.83
SF3A3-207ENST00000488934 DEFB130BP0DP73 79 aa3.62□□□□□ -1.83
SF3A3-207ENST00000488934 DEFB130AP0DP74 79 aa3.62□□□□□ -1.83
SF3A3-207ENST00000488934 HTN3P15516 51 aa3.62□□□□□ -1.83
SF3A3-207ENST00000488934 RNASE4P34096 147 aaKnown RBP3.62□□□□□ -1.83
SF3A3-207ENST00000488934 RPL36AP83881 106 aaKnown RBP3.62□□□□□ -1.83
SF3A3-207ENST00000488934 DAZ2Q13117 558 aaKnown RBP3.62□□□□□ -1.83
SF3A3-207ENST00000488934 ERCC8Q13216 396 aa3.62□□□□□ -1.83
SF3A3-207ENST00000488934 RPL7L1Q6DKI1 246 aaKnown RBP3.62□□□□□ -1.83
SF3A3-207ENST00000488934 EIF5AL1Q6IS14 154 aaKnown RBP3.62□□□□□ -1.83
SF3A3-207ENST00000488934 IQCF2Q8IXL9 164 aa3.62□□□□□ -1.83
SF3A3-207ENST00000488934 EIF4E3Q8N5X7 224 aaKnown RBP3.62□□□□□ -1.83
SF3A3-207ENST00000488934 C5orf17Q8NAS9 161 aa3.62□□□□□ -1.83
SF3A3-207ENST00000488934 STOML3Q8TAV4 291 aa3.62□□□□□ -1.83
SF3A3-207ENST00000488934 FAM19A4Q96LR4 140 aa3.62□□□□□ -1.83
SF3A3-207ENST00000488934 HYLS1Q96M11 299 aa3.62□□□□□ -1.83
SF3A3-207ENST00000488934 TCEAL7Q9BRU2 100 aa3.62□□□□□ -1.83
SF3A3-207ENST00000488934 AGPAT4-IT1Q9H0P7 198 aa3.62□□□□□ -1.83
SF3A3-207ENST00000488934 APLNQ9ULZ1 77 aa3.62□□□□□ -1.83
SF3A3-207ENST00000488934 RPH3ALQ9UNE2 315 aa3.62□□□□□ -1.83
SF3A3-207ENST00000488934 BIRC6Q9NR09 4857 aa3.61□□□□□ -1.83
SF3A3-207ENST00000488934 TRAV21A0A0B4J279 112 aa3.61□□□□□ -1.83
SF3A3-207ENST00000488934 PLAC8L1A1L4L8 177 aa3.61□□□□□ -1.83
SF3A3-207ENST00000488934 F5H768 121 aa3.61□□□□□ -1.83
SF3A3-207ENST00000488934 F6UZH7 168 aa3.61□□□□□ -1.83
SF3A3-207ENST00000488934 HMGB3O15347 200 aaKnown RBP3.61□□□□□ -1.83
SF3A3-207ENST00000488934 PFDN1O60925 122 aa3.61□□□□□ -1.83
SF3A3-207ENST00000488934 SEC11BP0C7V7 166 aa3.61□□□□□ -1.83
SF3A3-207ENST00000488934 GCHFRP30047 84 aa3.61□□□□□ -1.83
SF3A3-207ENST00000488934 AMTP48728 403 aa3.61□□□□□ -1.83
SF3A3-207ENST00000488934 PPT1P50897 306 aa3.61□□□□□ -1.83
SF3A3-207ENST00000488934 ZNF415Q09FC8 603 aa3.61□□□□□ -1.83
SF3A3-207ENST00000488934 BTN1A1Q13410 526 aa3.61□□□□□ -1.83
SF3A3-207ENST00000488934 LGALS9BQ3B8N2 356 aa3.61□□□□□ -1.83
SF3A3-207ENST00000488934 Q5BKY6 102 aa3.61□□□□□ -1.83
SF3A3-207ENST00000488934 FAM159AQ6UWV7 190 aa3.61□□□□□ -1.83
SF3A3-207ENST00000488934 DPPA3Q6W0C5 159 aa3.61□□□□□ -1.83
SF3A3-207ENST00000488934 GOLT1AQ6ZVE7 132 aa3.61□□□□□ -1.83
SF3A3-207ENST00000488934 ZNF767PQ75MW2 155 aa3.61□□□□□ -1.83
SF3A3-207ENST00000488934 UBE2DNLQ8IWF7 75 aa3.61□□□□□ -1.83
SF3A3-207ENST00000488934 KCNRGQ8N5I3 272 aa3.61□□□□□ -1.83
SF3A3-207ENST00000488934 ZFAND2AQ8N6M9 145 aa3.61□□□□□ -1.83
SF3A3-207ENST00000488934 SUN5Q8TC36 379 aa3.61□□□□□ -1.83
SF3A3-207ENST00000488934 KCNS1Q96KK3 526 aa3.61□□□□□ -1.83
SF3A3-207ENST00000488934 C18orf15Q96N68 181 aa3.61□□□□□ -1.83
SF3A3-207ENST00000488934 LYSTQ99698 3801 aa3.61□□□□□ -1.83
SF3A3-207ENST00000488934 VGLL1Q99990 258 aa3.61□□□□□ -1.83
SF3A3-207ENST00000488934 ATG101Q9BSB4 218 aa3.61□□□□□ -1.83
SF3A3-207ENST00000488934 SH3BGRL3Q9H299 93 aa3.61□□□□□ -1.83
SF3A3-207ENST00000488934 TREM1Q9NP99 234 aa3.61□□□□□ -1.83
SF3A3-207ENST00000488934 NOP10Q9NPE3 64 aaKnown RBP3.61□□□□□ -1.83
SF3A3-207ENST00000488934 ARL2-SNX15V9GYD0 113 aa3.61□□□□□ -1.83
SF3A3-207ENST00000488934 TRGV2A0A075B6R0 118 aa3.6□□□□□ -1.83
SF3A3-207ENST00000488934 IGHV1OR15-1A0A075B7D0 117 aa3.6□□□□□ -1.83
SF3A3-207ENST00000488934 MAP1LC3B2A6NCE7 125 aa3.6□□□□□ -1.83
SF3A3-207ENST00000488934 G3V3Q6 166 aa3.6□□□□□ -1.83
SF3A3-207ENST00000488934 H3BNG1 76 aa3.6□□□□□ -1.83
SF3A3-207ENST00000488934 TEX46H3BTG2 121 aa3.6□□□□□ -1.83
SF3A3-207ENST00000488934 BCL2L11O43521 198 aa3.6□□□□□ -1.83
SF3A3-207ENST00000488934 ZNF324O75467 553 aaPredicted RBP3.6□□□□□ -1.83
SF3A3-207ENST00000488934 IFNA7P01567 189 aa3.6□□□□□ -1.83
SF3A3-207ENST00000488934 TCRAP04437 139 aa3.6□□□□□ -1.83
SF3A3-207ENST00000488934 TPT1P13693 172 aaKnown RBP3.6□□□□□ -1.83
SF3A3-207ENST00000488934 AZU1P20160 251 aa3.6□□□□□ -1.83
SF3A3-207ENST00000488934 TCL1AP56279 114 aa3.6□□□□□ -1.83
SF3A3-207ENST00000488934 CD300CQ08708 224 aa3.6□□□□□ -1.83
SF3A3-207ENST00000488934 SLAQ13239 276 aa3.6□□□□□ -1.83
SF3A3-207ENST00000488934 RNF212Q495C1 297 aa3.6□□□□□ -1.83
SF3A3-207ENST00000488934 SAPCD1Q5SSQ6 148 aa3.6□□□□□ -1.83
SF3A3-207ENST00000488934 Q6AWC8 147 aa3.6□□□□□ -1.83
SF3A3-207ENST00000488934 CYB561D1Q8N8Q1 229 aa3.6□□□□□ -1.83
SF3A3-207ENST00000488934 TMEM75Q8N9X5 138 aa3.6□□□□□ -1.83
SF3A3-207ENST00000488934 Q8TAT8 98 aa3.6□□□□□ -1.83
SF3A3-207ENST00000488934 HIST1H2BAQ96A08 127 aa3.6□□□□□ -1.83
SF3A3-207ENST00000488934 ZNF471Q9BX82 626 aaPredicted RBP3.6□□□□□ -1.83
SF3A3-207ENST00000488934 KRTAP2-2Q9BYT5 123 aa3.6□□□□□ -1.83
SF3A3-207ENST00000488934 MAP1LC3BQ9GZQ8 125 aa3.6□□□□□ -1.83
SF3A3-207ENST00000488934 SDF2L1Q9HCN8 221 aa3.6□□□□□ -1.83
SF3A3-207ENST00000488934 EPDR1Q9UM22 224 aa3.6□□□□□ -1.83
SF3A3-207ENST00000488934 EPPK1P58107 5090 aaKnown RBP3.6□□□□□ -1.83
SF3A3-207ENST00000488934 TENM2Q9NT68 2774 aa3.6□□□□□ -1.83
SF3A3-207ENST00000488934 TRGV1A0A0A0MS02 117 aa3.59□□□□□ -1.83
SF3A3-207ENST00000488934 GGTLC3B5MD39 225 aa3.59□□□□□ -1.83
SF3A3-207ENST00000488934 SPINK4O60575 86 aa3.59□□□□□ -1.83
SF3A3-207ENST00000488934 GAGE7O76087 117 aa3.59□□□□□ -1.83
SF3A3-207ENST00000488934 PFN1P07737 140 aaKnown RBP3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 265.3 ms