RNA–Protein interactions for RNA: ENST00000488912.5

COL21A1-211, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL21A1, Length 2,327 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-211ENST00000488912 TSPOP30536 169 aa8.19□□□□□ -1.1
COL21A1-211ENST00000488912 Q0VG73 95 aa8.19□□□□□ -1.1
COL21A1-211ENST00000488912 DEFB114Q30KQ6 69 aa8.19□□□□□ -1.1
COL21A1-211ENST00000488912 SAMD13Q5VXD3 122 aa8.19□□□□□ -1.1
COL21A1-211ENST00000488912 PRR27Q6MZM9 219 aa8.19□□□□□ -1.1
COL21A1-211ENST00000488912 Q6ZVH6 145 aa8.19□□□□□ -1.1
COL21A1-211ENST00000488912 RNASE7Q9H1E1 156 aaKnown RBP8.19□□□□□ -1.1
COL21A1-211ENST00000488912 GRIFINA4D1Z8 144 aa8.19□□□□□ -1.1
COL21A1-211ENST00000488912 RBAKDNA6NC62 111 aa8.19□□□□□ -1.1
COL21A1-211ENST00000488912 PF4P02776 101 aa8.19□□□□□ -1.1
COL21A1-211ENST00000488912 ZNF688P0C7X2 276 aa8.19□□□□□ -1.1
COL21A1-211ENST00000488912 ID1P41134 155 aa8.19□□□□□ -1.1
COL21A1-211ENST00000488912 CD300EQ496F6 205 aaPredicted RBP8.19□□□□□ -1.1
COL21A1-211ENST00000488912 RBPMS2Q6ZRY4 209 aaKnown RBP8.19□□□□□ -1.1
COL21A1-211ENST00000488912 VWFP04275 2813 aa8.19□□□□□ -1.1
COL21A1-211ENST00000488912 F6UB75 175 aa8.18□□□□□ -1.1
COL21A1-211ENST00000488912 C8orf49Q96NF6 230 aa8.18□□□□□ -1.1
COL21A1-211ENST00000488912 AGPAT4-IT1Q9H0P7 198 aa8.18□□□□□ -1.1
COL21A1-211ENST00000488912 SIGLEC8Q9NYZ4 499 aa8.18□□□□□ -1.1
COL21A1-211ENST00000488912 AGRNO00468 2067 aa8.18□□□□□ -1.1
COL21A1-211ENST00000488912 SERF1AO75920 110 aa8.18□□□□□ -1.1
COL21A1-211ENST00000488912 PSMG4Q5JS54 123 aa8.18□□□□□ -1.1
COL21A1-211ENST00000488912 IBA57Q5T440 356 aaKnown RBP8.18□□□□□ -1.1
COL21A1-211ENST00000488912 LINC00322Q6ZN03 302 aaPredicted RBP8.18□□□□□ -1.1
COL21A1-211ENST00000488912 OR10G8Q8NGN5 311 aa8.18□□□□□ -1.1
COL21A1-211ENST00000488912 ZC2HC1AQ96GY0 325 aa8.18□□□□□ -1.1
COL21A1-211ENST00000488912 PRR25Q96S07 402 aa8.18□□□□□ -1.1
COL21A1-211ENST00000488912 IZUMO1RA6ND01 250 aa8.17□□□□□ -1.1
COL21A1-211ENST00000488912 FBLL1A6NHQ2 334 aaKnown RBP8.17□□□□□ -1.1
COL21A1-211ENST00000488912 SAP30O75446 220 aa8.17□□□□□ -1.1
COL21A1-211ENST00000488912 GPX1P07203 203 aa8.17□□□□□ -1.1
COL21A1-211ENST00000488912 HINT1P49773 126 aaPredicted RBP8.17□□□□□ -1.1
COL21A1-211ENST00000488912 SNRPD3P62318 126 aaKnown RBP8.17□□□□□ -1.1
COL21A1-211ENST00000488912 C9orf47Q6ZRZ4 202 aa8.17□□□□□ -1.1
COL21A1-211ENST00000488912 LINC00482Q8N8I6 264 aa8.17□□□□□ -1.1
COL21A1-211ENST00000488912 CLUHP3Q96NS8 147 aa8.17□□□□□ -1.1
COL21A1-211ENST00000488912 TRAV9-1A0A075B6T8 112 aa8.17□□□□□ -1.1
COL21A1-211ENST00000488912 VAMP3Q15836 100 aa8.17□□□□□ -1.1
COL21A1-211ENST00000488912 TMEM78Q5T7P6 136 aa8.17□□□□□ -1.1
COL21A1-211ENST00000488912 CRISP2P16562 243 aa8.16□□□□□ -1.1
COL21A1-211ENST00000488912 HIST1H1AQ02539 215 aaPredicted RBP8.16□□□□□ -1.1
COL21A1-211ENST00000488912 OR8A1Q8NGG7 326 aa8.16□□□□□ -1.1
COL21A1-211ENST00000488912 OR10J6PQ8NGY7 276 aa8.16□□□□□ -1.1
COL21A1-211ENST00000488912 OSTCQ9NRP0 149 aa8.16□□□□□ -1.1
COL21A1-211ENST00000488912 V9GYV3 84 aa8.16□□□□□ -1.1
COL21A1-211ENST00000488912 NPIPB6E9PJ23 425 aa8.15□□□□□ -1.1
COL21A1-211ENST00000488912 F2Z2F3 143 aa8.15□□□□□ -1.1
COL21A1-211ENST00000488912 ZNF138P52744 262 aa8.15□□□□□ -1.1
COL21A1-211ENST00000488912 GDF5OSQ5U4N7 250 aa8.15□□□□□ -1.1
COL21A1-211ENST00000488912 FAM231DQ6ZW35 169 aa8.15□□□□□ -1.1
COL21A1-211ENST00000488912 NIT1Q86X76 327 aa8.15□□□□□ -1.1
COL21A1-211ENST00000488912 ZNF492Q9P255 531 aa8.15□□□□□ -1.1
COL21A1-211ENST00000488912 TRAV2A0A0B4J234 112 aa8.15□□□□□ -1.1
COL21A1-211ENST00000488912 C19orf71A6NCJ1 209 aa8.15□□□□□ -1.1
COL21A1-211ENST00000488912 CRIP1P50238 77 aa8.15□□□□□ -1.1
COL21A1-211ENST00000488912 CFAP161Q6P656 301 aa8.15□□□□□ -1.1
COL21A1-211ENST00000488912 SPATA3Q8NHX4 192 aa8.15□□□□□ -1.1
COL21A1-211ENST00000488912 SPAG8Q99932 426 aaPredicted RBP8.15□□□□□ -1.1
COL21A1-211ENST00000488912 NDFIP1Q9BT67 221 aa8.15□□□□□ -1.1
COL21A1-211ENST00000488912 TRRAPQ9Y4A5 3859 aa8.14□□□□□ -1.11
COL21A1-211ENST00000488912 TRAV25A0A0B4J276 109 aa8.14□□□□□ -1.11
COL21A1-211ENST00000488912 CA1P00915 261 aaPredicted RBP8.14□□□□□ -1.11
COL21A1-211ENST00000488912 CT45A10P0DMU9 189 aa8.14□□□□□ -1.11
COL21A1-211ENST00000488912 COX8CQ7Z4L0 72 aa8.14□□□□□ -1.11
COL21A1-211ENST00000488912 SAMD10Q9BYL1 202 aa8.14□□□□□ -1.11
COL21A1-211ENST00000488912 ZNF256Q9Y2P7 627 aaPredicted RBP8.14□□□□□ -1.11
COL21A1-211ENST00000488912 STAB1Q9NY15 2570 aa8.14□□□□□ -1.11
COL21A1-211ENST00000488912 TAX1BP3O14907 124 aa8.14□□□□□ -1.11
COL21A1-211ENST00000488912 IGLV1-51P01701 117 aa8.14□□□□□ -1.11
COL21A1-211ENST00000488912 SCGB1A1P11684 91 aa8.14□□□□□ -1.11
COL21A1-211ENST00000488912 ZNF80P51504 273 aaPredicted RBP8.14□□□□□ -1.11
COL21A1-211ENST00000488912 MRPL18Q9H0U6 180 aaKnown RBP8.14□□□□□ -1.11
COL21A1-211ENST00000488912 NOTCH3Q9UM47 2321 aa8.14□□□□□ -1.11
COL21A1-211ENST00000488912 OR4C46A6NHA9 309 aa8.13□□□□□ -1.11
COL21A1-211ENST00000488912 P01737 135 aa8.13□□□□□ -1.11
COL21A1-211ENST00000488912 DEFB131AP59861 70 aa8.13□□□□□ -1.11
COL21A1-211ENST00000488912 KRTDAPP60985 99 aa8.13□□□□□ -1.11
COL21A1-211ENST00000488912 PET117Q6UWS5 81 aa8.13□□□□□ -1.11
COL21A1-211ENST00000488912 DAZAP1Q96EP5 407 aaKnown RBP8.13□□□□□ -1.11
COL21A1-211ENST00000488912 LINC00477Q96M19 166 aa8.13□□□□□ -1.11
COL21A1-211ENST00000488912 A0A0J9YX75 114 aa8.13□□□□□ -1.11
COL21A1-211ENST00000488912 MAP6D1Q9H9H5 199 aa8.13□□□□□ -1.11
COL21A1-211ENST00000488912 IL36BQ9NZH7 164 aa8.13□□□□□ -1.11
COL21A1-211ENST00000488912 G3V4G9 280 aa8.12□□□□□ -1.11
COL21A1-211ENST00000488912 SH2D1AO60880 128 aa8.12□□□□□ -1.11
COL21A1-211ENST00000488912 PMCHL1Q16048 86 aa8.12□□□□□ -1.11
COL21A1-211ENST00000488912 FAM162BQ5T6X4 162 aa8.12□□□□□ -1.11
COL21A1-211ENST00000488912 BAGE3Q86Y29 109 aa8.12□□□□□ -1.11
COL21A1-211ENST00000488912 ZNF747Q9BV97 191 aa8.12□□□□□ -1.11
COL21A1-211ENST00000488912 RPP21Q9H633 154 aaKnown RBP8.12□□□□□ -1.11
COL21A1-211ENST00000488912 LENEPQ9Y5L5 61 aa8.12□□□□□ -1.11
COL21A1-211ENST00000488912 GAGE12BA1L429 117 aa8.12□□□□□ -1.11
COL21A1-211ENST00000488912 FRMD6-AS1P0C7T7 363 aa8.12□□□□□ -1.11
COL21A1-211ENST00000488912 PRR9Q5T870 116 aa8.12□□□□□ -1.11
COL21A1-211ENST00000488912 EBLN2Q6P2I7 272 aa8.12□□□□□ -1.11
COL21A1-211ENST00000488912 FOXI2Q6ZQN5 318 aa8.12□□□□□ -1.11
COL21A1-211ENST00000488912 ZFAND2AQ8N6M9 145 aa8.12□□□□□ -1.11
COL21A1-211ENST00000488912 FAM19A4Q96LR4 140 aa8.12□□□□□ -1.11
COL21A1-211ENST00000488912 COL6A5A8TX70 2615 aa8.11□□□□□ -1.11
COL21A1-211ENST00000488912 J3KRW8 73 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms