RNA–Protein interactions for RNA: ENST00000488910.1

ATG3-205, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 681 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-205ENST00000488910 TMEM75Q8N9X5 138 aa12.1□□□□□ -0.47
ATG3-205ENST00000488910 NKX6-2Q9C056 277 aaPredicted RBP12.1□□□□□ -0.47
ATG3-205ENST00000488910 SDF2L1Q9HCN8 221 aa12.1□□□□□ -0.47
ATG3-205ENST00000488910 IGHV3-16A0A0C4DH30 117 aa12.09□□□□□ -0.47
ATG3-205ENST00000488910 M0R2P5 195 aa12.09□□□□□ -0.47
ATG3-205ENST00000488910 IGLV2-11P01706 119 aa12.09□□□□□ -0.47
ATG3-205ENST00000488910 FLI1Q01543 452 aaPredicted RBP12.09□□□□□ -0.47
ATG3-205ENST00000488910 SAPCD1Q5SSQ6 148 aa12.09□□□□□ -0.47
ATG3-205ENST00000488910 MRPS16Q9Y3D3 137 aaKnown RBP12.09□□□□□ -0.47
ATG3-205ENST00000488910 ICOSQ9Y6W8 199 aa12.09□□□□□ -0.47
ATG3-205ENST00000488910 TRGV4A0A0C4DH28 118 aa12.08□□□□□ -0.48
ATG3-205ENST00000488910 HMSDA8MTL9 139 aa12.08□□□□□ -0.48
ATG3-205ENST00000488910 SMLR1H3BR10 107 aa12.08□□□□□ -0.48
ATG3-205ENST00000488910 CRYBA4P53673 196 aa12.08□□□□□ -0.48
ATG3-205ENST00000488910 ZNF345Q14585 488 aa12.08□□□□□ -0.48
ATG3-205ENST00000488910 ZFP69Q49AA0 526 aa12.08□□□□□ -0.48
ATG3-205ENST00000488910 SMUG1Q53HV7 270 aa12.08□□□□□ -0.48
ATG3-205ENST00000488910 KCNRGQ8N5I3 272 aa12.08□□□□□ -0.48
ATG3-205ENST00000488910 IFNA7P01567 189 aa12.07□□□□□ -0.48
ATG3-205ENST00000488910 TYMSP04818 313 aa12.07□□□□□ -0.48
ATG3-205ENST00000488910 PFN1P07737 140 aaKnown RBP12.07□□□□□ -0.48
ATG3-205ENST00000488910 TTC32Q5I0X7 151 aa12.07□□□□□ -0.48
ATG3-205ENST00000488910 PRNTQ86SH4 94 aa12.07□□□□□ -0.48
ATG3-205ENST00000488910 C6orf223Q8N319 242 aa12.07□□□□□ -0.48
ATG3-205ENST00000488910 C8orf49Q96NF6 230 aa12.07□□□□□ -0.48
ATG3-205ENST00000488910 TRAV4A0A0B4J268 109 aa12.06□□□□□ -0.48
ATG3-205ENST00000488910 A0A0D9SG52 128 aa12.06□□□□□ -0.48
ATG3-205ENST00000488910 A0A1W2PPQ1 181 aa12.06□□□□□ -0.48
ATG3-205ENST00000488910 GCGP01275 180 aa12.06□□□□□ -0.48
ATG3-205ENST00000488910 PPT1P50897 306 aa12.06□□□□□ -0.48
ATG3-205ENST00000488910 ZNF80P51504 273 aaPredicted RBP12.06□□□□□ -0.48
ATG3-205ENST00000488910 FGF8P55075 233 aaPredicted RBP12.06□□□□□ -0.48
ATG3-205ENST00000488910 MRPL23Q16540 153 aaKnown RBP12.06□□□□□ -0.48
ATG3-205ENST00000488910 ZNF479Q96JC4 524 aa12.06□□□□□ -0.48
ATG3-205ENST00000488910 PKHD1P08F94 4074 aa12.06□□□□□ -0.48
ATG3-205ENST00000488910 PKD1P98161 4303 aa12.05□□□□□ -0.48
ATG3-205ENST00000488910 MAP1LC3B2A6NCE7 125 aa12.05□□□□□ -0.48
ATG3-205ENST00000488910 FAM74A7A6NL05 159 aa12.05□□□□□ -0.48
ATG3-205ENST00000488910 SFTA3P0C7M3 94 aa12.05□□□□□ -0.48
ATG3-205ENST00000488910 UBE2G2P60604 165 aa12.05□□□□□ -0.48
ATG3-205ENST00000488910 OR4C5Q8NGB2 326 aa12.05□□□□□ -0.48
ATG3-205ENST00000488910 STOML3Q8TAV4 291 aa12.05□□□□□ -0.48
ATG3-205ENST00000488910 HIST1H2BAQ96A08 127 aa12.05□□□□□ -0.48
ATG3-205ENST00000488910 MAP1LC3BQ9GZQ8 125 aa12.05□□□□□ -0.48
ATG3-205ENST00000488910 SEC11BP0C7V7 166 aa12.04□□□□□ -0.48
ATG3-205ENST00000488910 BTF3P20290 206 aaKnown RBP12.04□□□□□ -0.48
ATG3-205ENST00000488910 OR11H4Q8NGC9 324 aa12.04□□□□□ -0.48
ATG3-205ENST00000488910 LINC00479Q96M42 142 aa12.04□□□□□ -0.48
ATG3-205ENST00000488910 C11orf21Q9P2W6 132 aa12.04□□□□□ -0.48
ATG3-205ENST00000488910 PEX7O00628 323 aa12.03□□□□□ -0.48
ATG3-205ENST00000488910 ORM1P02763 201 aa12.03□□□□□ -0.48
ATG3-205ENST00000488910 FHITP49789 147 aa12.03□□□□□ -0.48
ATG3-205ENST00000488910 NEGR1Q7Z3B1 354 aa12.03□□□□□ -0.48
ATG3-205ENST00000488910 TRAV34A0A0B4J273 112 aa12.02□□□□□ -0.49
ATG3-205ENST00000488910 KANTRA0A1W2PQU2 76 aa12.02□□□□□ -0.49
ATG3-205ENST00000488910 UMAD1C9J7I0 102 aa12.02□□□□□ -0.49
ATG3-205ENST00000488910 CIDEAO60543 219 aa12.02□□□□□ -0.49
ATG3-205ENST00000488910 LYPD5Q6UWN5 251 aa12.02□□□□□ -0.49
ATG3-205ENST00000488910 PCNPQ8WW12 178 aaKnown RBP12.02□□□□□ -0.49
ATG3-205ENST00000488910 PTH2Q96A98 100 aa12.02□□□□□ -0.49
ATG3-205ENST00000488910 TCEAL7Q9BRU2 100 aa12.02□□□□□ -0.49
ATG3-205ENST00000488910 ARL2-SNX15V9GYD0 113 aa12.02□□□□□ -0.49
ATG3-205ENST00000488910 FABP5P3A8MUU1 101 aa12.01□□□□□ -0.49
ATG3-205ENST00000488910 K7EQD1 137 aa12.01□□□□□ -0.49
ATG3-205ENST00000488910 EIF5AP63241 154 aaKnown RBP12.01□□□□□ -0.49
ATG3-205ENST00000488910 ZNF876PQ49A33 203 aa12.01□□□□□ -0.49
ATG3-205ENST00000488910 C9orf85Q96MD7 179 aa12.01□□□□□ -0.49
ATG3-205ENST00000488910 ZFP30Q9Y2G7 519 aa12.01□□□□□ -0.49
ATG3-205ENST00000488910 C9JCJ5 164 aa12□□□□□ -0.49
ATG3-205ENST00000488910 SIVA1O15304 175 aa12□□□□□ -0.49
ATG3-205ENST00000488910 BCL2L11O43521 198 aa12□□□□□ -0.49
ATG3-205ENST00000488910 GYPEP15421 78 aa12□□□□□ -0.49
ATG3-205ENST00000488910 SRIP30626 198 aa12□□□□□ -0.49
ATG3-205ENST00000488910 DPPA3Q6W0C5 159 aa12□□□□□ -0.49
ATG3-205ENST00000488910 MBD3L1Q8WWY6 194 aa12□□□□□ -0.49
ATG3-205ENST00000488910 TXNDC17Q9BRA2 123 aa12□□□□□ -0.49
ATG3-205ENST00000488910 ZNF471Q9BX82 626 aaPredicted RBP12□□□□□ -0.49
ATG3-205ENST00000488910 NXPH4O95158 308 aa11.99□□□□□ -0.49
ATG3-205ENST00000488910 TNP2Q05952 138 aa11.99□□□□□ -0.49
ATG3-205ENST00000488910 CST9LP1Q5W188 147 aa11.99□□□□□ -0.49
ATG3-205ENST00000488910 COX8CQ7Z4L0 72 aa11.99□□□□□ -0.49
ATG3-205ENST00000488910 SH2D6Q7Z4S9 175 aa11.99□□□□□ -0.49
ATG3-205ENST00000488910 Q86TA4 180 aa11.99□□□□□ -0.49
ATG3-205ENST00000488910 SFT2D1Q8WV19 159 aa11.99□□□□□ -0.49
ATG3-205ENST00000488910 FMC1Q96HJ9 113 aa11.99□□□□□ -0.49
ATG3-205ENST00000488910 KRTAP1-5Q9BYS1 174 aa11.99□□□□□ -0.49
ATG3-205ENST00000488910 HERC2O95714 4834 aa11.99□□□□□ -0.49
ATG3-205ENST00000488910 TRBV6-1A0A0K0K1D8 114 aa11.98□□□□□ -0.49
ATG3-205ENST00000488910 RS1O15537 224 aa11.98□□□□□ -0.49
ATG3-205ENST00000488910 RNASE3P12724 160 aaKnown RBP11.98□□□□□ -0.49
ATG3-205ENST00000488910 GATA1P15976 413 aaPredicted RBP11.98□□□□□ -0.49
ATG3-205ENST00000488910 FAM213BQ8TBF2 198 aa11.98□□□□□ -0.49
ATG3-205ENST00000488910 IGKV3D-20A0A0C4DH25 116 aa11.97□□□□□ -0.49
ATG3-205ENST00000488910 S100A4P26447 101 aaKnown RBP11.97□□□□□ -0.49
ATG3-205ENST00000488910 UBE2G1P62253 170 aa11.97□□□□□ -0.49
ATG3-205ENST00000488910 PIK3CD-AS1Q5SR53 167 aa11.97□□□□□ -0.49
ATG3-205ENST00000488910 CFAP126Q5VTH2 177 aa11.97□□□□□ -0.49
ATG3-205ENST00000488910 TMUB2Q71RG4 321 aa11.97□□□□□ -0.49
ATG3-205ENST00000488910 DYNC1H1Q14204 4646 aaKnown RBP11.97□□□□□ -0.49
ATG3-205ENST00000488910 KIAA1109Q2LD37 5005 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms