RNA–Protein interactions for RNA: ENST00000488069.5

CCDC12-205, Transcript of coiled-coil domain containing 12, humanhuman

TSL 2

Gene CCDC12, Length 897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-205ENST00000488069 MRPL23Q16540 153 aaKnown RBP12.47□□□□□ -0.41
CCDC12-205ENST00000488069 ZNF479Q96JC4 524 aa12.47□□□□□ -0.41
CCDC12-205ENST00000488069 KCNS1Q96KK3 526 aa12.47□□□□□ -0.41
CCDC12-205ENST00000488069 SGK494Q96LW2 274 aa12.47□□□□□ -0.41
CCDC12-205ENST00000488069 SDF2L1Q9HCN8 221 aa12.47□□□□□ -0.41
CCDC12-205ENST00000488069 IGHV3-16A0A0C4DH30 117 aa12.46□□□□□ -0.41
CCDC12-205ENST00000488069 M0R2P5 195 aa12.46□□□□□ -0.41
CCDC12-205ENST00000488069 GNRH2O43555 120 aa12.46□□□□□ -0.41
CCDC12-205ENST00000488069 TYMSP04818 313 aa12.46□□□□□ -0.41
CCDC12-205ENST00000488069 SUMO1P63165 101 aaKnown RBP12.46□□□□□ -0.41
CCDC12-205ENST00000488069 ZNF575Q86XF7 245 aa12.46□□□□□ -0.41
CCDC12-205ENST00000488069 IQCF2Q8IXL9 164 aa12.46□□□□□ -0.41
CCDC12-205ENST00000488069 TRAV4A0A0B4J268 109 aa12.45□□□□□ -0.42
CCDC12-205ENST00000488069 GGTLC3B5MD39 225 aa12.45□□□□□ -0.42
CCDC12-205ENST00000488069 BTF3P20290 206 aaKnown RBP12.45□□□□□ -0.42
CCDC12-205ENST00000488069 PCNPQ8WW12 178 aaKnown RBP12.45□□□□□ -0.42
CCDC12-205ENST00000488069 EPDR1Q9UM22 224 aa12.45□□□□□ -0.42
CCDC12-205ENST00000488069 PSG8Q9UQ74 426 aa12.45□□□□□ -0.42
CCDC12-205ENST00000488069 SIVA1O15304 175 aa12.44□□□□□ -0.42
CCDC12-205ENST00000488069 NXPH4O95158 308 aa12.44□□□□□ -0.42
CCDC12-205ENST00000488069 FLI1Q01543 452 aaPredicted RBP12.44□□□□□ -0.42
CCDC12-205ENST00000488069 ZFP69Q49AA0 526 aa12.44□□□□□ -0.42
CCDC12-205ENST00000488069 NEGR1Q7Z3B1 354 aa12.44□□□□□ -0.42
CCDC12-205ENST00000488069 CYB561D1Q8N8Q1 229 aa12.44□□□□□ -0.42
CCDC12-205ENST00000488069 OR4C5Q8NGB2 326 aa12.44□□□□□ -0.42
CCDC12-205ENST00000488069 CTXND1A0A1B0GTU2 59 aa12.43□□□□□ -0.42
CCDC12-205ENST00000488069 A0A1W2PRE2 83 aa12.43□□□□□ -0.42
CCDC12-205ENST00000488069 FBLL1A6NHQ2 334 aaKnown RBP12.43□□□□□ -0.42
CCDC12-205ENST00000488069 TAAR5O14804 337 aa12.43□□□□□ -0.42
CCDC12-205ENST00000488069 ORM1P02763 201 aa12.43□□□□□ -0.42
CCDC12-205ENST00000488069 SRIP30626 198 aa12.43□□□□□ -0.42
CCDC12-205ENST00000488069 TMEM75Q8N9X5 138 aa12.43□□□□□ -0.42
CCDC12-205ENST00000488069 G3V3Q6 166 aa12.42□□□□□ -0.42
CCDC12-205ENST00000488069 K7EQD1 137 aa12.42□□□□□ -0.42
CCDC12-205ENST00000488069 GCGP01275 180 aa12.42□□□□□ -0.42
CCDC12-205ENST00000488069 IGLV2-11P01706 119 aa12.42□□□□□ -0.42
CCDC12-205ENST00000488069 ZNF80P51504 273 aaPredicted RBP12.42□□□□□ -0.42
CCDC12-205ENST00000488069 ZNF726P1Q15940 193 aa12.42□□□□□ -0.42
CCDC12-205ENST00000488069 SMUG1Q53HV7 270 aa12.42□□□□□ -0.42
CCDC12-205ENST00000488069 AKR1C8PQ5T2L2 129 aa12.42□□□□□ -0.42
CCDC12-205ENST00000488069 LYPD5Q6UWN5 251 aa12.42□□□□□ -0.42
CCDC12-205ENST00000488069 PRNTQ86SH4 94 aa12.42□□□□□ -0.42
CCDC12-205ENST00000488069 C16orf90A8MZG2 172 aa12.41□□□□□ -0.42
CCDC12-205ENST00000488069 C9JCJ5 164 aa12.41□□□□□ -0.42
CCDC12-205ENST00000488069 ARPC5O15511 151 aa12.41□□□□□ -0.42
CCDC12-205ENST00000488069 PFN1P07737 140 aaKnown RBP12.41□□□□□ -0.42
CCDC12-205ENST00000488069 GYPEP15421 78 aa12.41□□□□□ -0.42
CCDC12-205ENST00000488069 SAPCD1Q5SSQ6 148 aa12.41□□□□□ -0.42
CCDC12-205ENST00000488069 TXNDC17Q9BRA2 123 aa12.4□□□□□ -0.42
CCDC12-205ENST00000488069 C11orf21Q9P2W6 132 aa12.4□□□□□ -0.42
CCDC12-205ENST00000488069 IFNA7P01567 189 aa12.39□□□□□ -0.43
CCDC12-205ENST00000488069 PPT1P50897 306 aa12.39□□□□□ -0.43
CCDC12-205ENST00000488069 LINC00315P59091 139 aa12.39□□□□□ -0.43
CCDC12-205ENST00000488069 UBE2G2P60604 165 aa12.39□□□□□ -0.43
CCDC12-205ENST00000488069 FGF8P55075 233 aaPredicted RBP12.38□□□□□ -0.43
CCDC12-205ENST00000488069 ZNF876PQ49A33 203 aa12.38□□□□□ -0.43
CCDC12-205ENST00000488069 NKX6-2Q9C056 277 aaPredicted RBP12.38□□□□□ -0.43
CCDC12-205ENST00000488069 TRAV34A0A0B4J273 112 aa12.37□□□□□ -0.43
CCDC12-205ENST00000488069 SPATA12Q7Z6I5 190 aa12.37□□□□□ -0.43
CCDC12-205ENST00000488069 LINC00479Q96M42 142 aa12.37□□□□□ -0.43
CCDC12-205ENST00000488069 C9orf85Q96MD7 179 aa12.37□□□□□ -0.43
CCDC12-205ENST00000488069 CYTL1Q9NRR1 136 aa12.37□□□□□ -0.43
CCDC12-205ENST00000488069 ARL2-SNX15V9GYD0 113 aa12.37□□□□□ -0.43
CCDC12-205ENST00000488069 TRAV9-2A0A087WT02 112 aa12.36□□□□□ -0.43
CCDC12-205ENST00000488069 MAP1LC3B2A6NCE7 125 aa12.36□□□□□ -0.43
CCDC12-205ENST00000488069 FAM74A7A6NL05 159 aa12.36□□□□□ -0.43
CCDC12-205ENST00000488069 PEX7O00628 323 aa12.36□□□□□ -0.43
CCDC12-205ENST00000488069 GATA1P15976 413 aaPredicted RBP12.36□□□□□ -0.43
CCDC12-205ENST00000488069 SH2D6Q7Z4S9 175 aa12.36□□□□□ -0.43
CCDC12-205ENST00000488069 HIST1H2BAQ96A08 127 aa12.36□□□□□ -0.43
CCDC12-205ENST00000488069 KRTAP17-1Q9BYP8 105 aa12.36□□□□□ -0.43
CCDC12-205ENST00000488069 MAP1LC3BQ9GZQ8 125 aa12.36□□□□□ -0.43
CCDC12-205ENST00000488069 LY96Q9Y6Y9 160 aa12.36□□□□□ -0.43
CCDC12-205ENST00000488069 PCLOQ9Y6V0 5065 aa12.36□□□□□ -0.43
CCDC12-205ENST00000488069 RYR1P21817 5038 aa12.36□□□□□ -0.43
CCDC12-205ENST00000488069 LRP1BQ9NZR2 4599 aa12.35□□□□□ -0.43
CCDC12-205ENST00000488069 LOC100131303A0A0U1RQF7 123 aa12.35□□□□□ -0.43
CCDC12-205ENST00000488069 SMLR1H3BR10 107 aa12.35□□□□□ -0.43
CCDC12-205ENST00000488069 CIDEAO60543 219 aa12.35□□□□□ -0.43
CCDC12-205ENST00000488069 CFAP126Q5VTH2 177 aa12.35□□□□□ -0.43
CCDC12-205ENST00000488069 NHLRC2Q8NBF2 726 aa12.35□□□□□ -0.43
CCDC12-205ENST00000488069 RS1O15537 224 aa12.34□□□□□ -0.43
CCDC12-205ENST00000488069 Q6ZRN7 208 aaPredicted RBP12.34□□□□□ -0.43
CCDC12-205ENST00000488069 Q86TA4 180 aa12.34□□□□□ -0.43
CCDC12-205ENST00000488069 WFDC10BQ8IUB3 73 aa12.34□□□□□ -0.43
CCDC12-205ENST00000488069 STOML3Q8TAV4 291 aa12.34□□□□□ -0.43
CCDC12-205ENST00000488069 PTH2Q96A98 100 aa12.34□□□□□ -0.43
CCDC12-205ENST00000488069 HSPG2P98160 4391 aa12.33□□□□□ -0.44
CCDC12-205ENST00000488069 FABP5P3A8MUU1 101 aa12.33□□□□□ -0.44
CCDC12-205ENST00000488069 K7EP13 123 aa12.33□□□□□ -0.44
CCDC12-205ENST00000488069 RNASE3P12724 160 aaKnown RBP12.33□□□□□ -0.44
CCDC12-205ENST00000488069 EVI2AP22794 236 aa12.33□□□□□ -0.44
CCDC12-205ENST00000488069 ZNF345Q14585 488 aa12.33□□□□□ -0.44
CCDC12-205ENST00000488069 ZNF506Q5JVG8 444 aa12.33□□□□□ -0.44
CCDC12-205ENST00000488069 DPPA3Q6W0C5 159 aa12.33□□□□□ -0.44
CCDC12-205ENST00000488069 NFE4Q86UQ8 179 aa12.33□□□□□ -0.44
CCDC12-205ENST00000488069 KCNRGQ8N5I3 272 aa12.33□□□□□ -0.44
CCDC12-205ENST00000488069 PRADC1Q9BSG0 188 aa12.33□□□□□ -0.44
CCDC12-205ENST00000488069 IGKV3D-20A0A0C4DH25 116 aa12.32□□□□□ -0.44
CCDC12-205ENST00000488069 PGPEP1LA6NFU8 196 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms