RNA–Protein interactions for RNA: ENST00000487645.1

COL4A6-207, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 3

Gene COL4A6, Length 812 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-207ENST00000487645 LYRM9A8MSI8 78 aa9.53□□□□□ -0.88
COL4A6-207ENST00000487645 C9JQL5 133 aa9.53□□□□□ -0.88
COL4A6-207ENST00000487645 SH2D1AO60880 128 aa9.53□□□□□ -0.88
COL4A6-207ENST00000487645 EMP1P54849 157 aa9.53□□□□□ -0.88
COL4A6-207ENST00000487645 SRSF3P84103 164 aaKnown RBP9.53□□□□□ -0.88
COL4A6-207ENST00000487645 DAZ2Q13117 558 aaKnown RBP9.53□□□□□ -0.88
COL4A6-207ENST00000487645 FAM74A3Q4VXF1 159 aa9.53□□□□□ -0.88
COL4A6-207ENST00000487645 C11orf72Q8NBR9 251 aa9.53□□□□□ -0.88
COL4A6-207ENST00000487645 C11orf45Q8TAV5 145 aa9.53□□□□□ -0.88
COL4A6-207ENST00000487645 C11orf21Q9P2W6 132 aa9.53□□□□□ -0.88
COL4A6-207ENST00000487645 DKK2Q9UBU2 259 aa9.53□□□□□ -0.88
COL4A6-207ENST00000487645 NAGKQ9UJ70 344 aa9.53□□□□□ -0.88
COL4A6-207ENST00000487645 LY96Q9Y6Y9 160 aa9.53□□□□□ -0.88
COL4A6-207ENST00000487645 SNURFLB1AK76 121 aa9.52□□□□□ -0.89
COL4A6-207ENST00000487645 GNRH2O43555 120 aa9.52□□□□□ -0.89
COL4A6-207ENST00000487645 ORM1P02763 201 aa9.52□□□□□ -0.89
COL4A6-207ENST00000487645 CEBPGP53567 150 aa9.52□□□□□ -0.89
COL4A6-207ENST00000487645 TCL1AP56279 114 aa9.52□□□□□ -0.89
COL4A6-207ENST00000487645 FAM222AQ5U5X8 452 aa9.52□□□□□ -0.89
COL4A6-207ENST00000487645 OCC1Q8TAD7 63 aa9.52□□□□□ -0.89
COL4A6-207ENST00000487645 SMIM7Q9BQ49 75 aa9.52□□□□□ -0.89
COL4A6-207ENST00000487645 IGKV3D-20A0A0C4DH25 116 aa9.51□□□□□ -0.89
COL4A6-207ENST00000487645 ZNF727A8MUV8 499 aa9.51□□□□□ -0.89
COL4A6-207ENST00000487645 B4DEV8 164 aa9.51□□□□□ -0.89
COL4A6-207ENST00000487645 KRBOX1C9JBD0 128 aa9.51□□□□□ -0.89
COL4A6-207ENST00000487645 MGST1P10620 155 aaKnown RBP9.51□□□□□ -0.89
COL4A6-207ENST00000487645 ZNF415Q09FC8 603 aa9.51□□□□□ -0.89
COL4A6-207ENST00000487645 LINC01559Q495D7 138 aa9.51□□□□□ -0.89
COL4A6-207ENST00000487645 DNLZQ5SXM8 178 aa9.51□□□□□ -0.89
COL4A6-207ENST00000487645 DAZAP1Q96EP5 407 aaKnown RBP9.51□□□□□ -0.89
COL4A6-207ENST00000487645 SPXQ9BT56 116 aa9.51□□□□□ -0.89
COL4A6-207ENST00000487645 NOP10Q9NPE3 64 aaKnown RBP9.51□□□□□ -0.89
COL4A6-207ENST00000487645 GSN-AS1Q9NRJ2 163 aa9.51□□□□□ -0.89
COL4A6-207ENST00000487645 MDFICQ9P1T7 246 aa9.51□□□□□ -0.89
COL4A6-207ENST00000487645 IGHV3-16A0A0C4DH30 117 aa9.5□□□□□ -0.89
COL4A6-207ENST00000487645 PGPEP1LA6NFU8 196 aa9.5□□□□□ -0.89
COL4A6-207ENST00000487645 TYMSP04818 313 aa9.5□□□□□ -0.89
COL4A6-207ENST00000487645 PRR27Q6MZM9 219 aa9.5□□□□□ -0.89
COL4A6-207ENST00000487645 CELA1Q9UNI1 258 aa9.5□□□□□ -0.89
COL4A6-207ENST00000487645 MUC4Q99102 2169 aa9.5□□□□□ -0.89
COL4A6-207ENST00000487645 LINC00862A6NCI5 91 aa9.49□□□□□ -0.89
COL4A6-207ENST00000487645 C19orf71A6NCJ1 209 aa9.49□□□□□ -0.89
COL4A6-207ENST00000487645 TMEM241Q24JQ0 296 aa9.49□□□□□ -0.89
COL4A6-207ENST00000487645 C12orf74Q32Q52 190 aa9.49□□□□□ -0.89
COL4A6-207ENST00000487645 LGALS9BQ3B8N2 356 aa9.49□□□□□ -0.89
COL4A6-207ENST00000487645 SOHLH1Q5JUK2 328 aa9.49□□□□□ -0.89
COL4A6-207ENST00000487645 UQCC3Q6UW78 93 aa9.49□□□□□ -0.89
COL4A6-207ENST00000487645 ZNF575Q86XF7 245 aa9.49□□□□□ -0.89
COL4A6-207ENST00000487645 K7EN84 100 aa9.48□□□□□ -0.89
COL4A6-207ENST00000487645 M0R036 132 aa9.48□□□□□ -0.89
COL4A6-207ENST00000487645 SPINK4O60575 86 aa9.48□□□□□ -0.89
COL4A6-207ENST00000487645 CXCL1P09341 107 aa9.48□□□□□ -0.89
COL4A6-207ENST00000487645 NANOS2P60321 138 aaKnown RBP9.48□□□□□ -0.89
COL4A6-207ENST00000487645 DAD1P61803 113 aa9.48□□□□□ -0.89
COL4A6-207ENST00000487645 LINC00612Q8N6U2 182 aa9.48□□□□□ -0.89
COL4A6-207ENST00000487645 MUC7Q8TAX7 377 aa9.48□□□□□ -0.89
COL4A6-207ENST00000487645 M0R2P5 195 aa9.47□□□□□ -0.89
COL4A6-207ENST00000487645 S100A4P26447 101 aaKnown RBP9.47□□□□□ -0.89
COL4A6-207ENST00000487645 ASIPP42127 132 aa9.47□□□□□ -0.89
COL4A6-207ENST00000487645 OR5I1Q13606 314 aa9.47□□□□□ -0.89
COL4A6-207ENST00000487645 LINC01551Q86U37 167 aa9.47□□□□□ -0.89
COL4A6-207ENST00000487645 RASL10AQ92737 203 aa9.47□□□□□ -0.89
COL4A6-207ENST00000487645 PTH2Q96A98 100 aa9.47□□□□□ -0.89
COL4A6-207ENST00000487645 C9orf85Q96MD7 179 aa9.47□□□□□ -0.89
COL4A6-207ENST00000487645 IL36BQ9NZH7 164 aa9.47□□□□□ -0.89
COL4A6-207ENST00000487645 NAT8Q9UHE5 227 aa9.47□□□□□ -0.89
COL4A6-207ENST00000487645 DNAH7Q8WXX0 4024 aa9.47□□□□□ -0.89
COL4A6-207ENST00000487645 P01737 135 aa9.46□□□□□ -0.9
COL4A6-207ENST00000487645 DEFB130BP0DP73 79 aa9.46□□□□□ -0.9
COL4A6-207ENST00000487645 DEFB130AP0DP74 79 aa9.46□□□□□ -0.9
COL4A6-207ENST00000487645 RNASE3P12724 160 aaKnown RBP9.46□□□□□ -0.9
COL4A6-207ENST00000487645 RPS20P60866 119 aaKnown RBP9.46□□□□□ -0.9
COL4A6-207ENST00000487645 Q6ZTI0 123 aa9.46□□□□□ -0.9
COL4A6-207ENST00000487645 FAM231DQ6ZW35 169 aa9.46□□□□□ -0.9
COL4A6-207ENST00000487645 NUDT10Q8NFP7 164 aa9.46□□□□□ -0.9
COL4A6-207ENST00000487645 NUDT11Q96G61 164 aa9.46□□□□□ -0.9
COL4A6-207ENST00000487645 C18orf15Q96N68 181 aa9.46□□□□□ -0.9
COL4A6-207ENST00000487645 TRGV1A0A0A0MS02 117 aa9.45□□□□□ -0.9
COL4A6-207ENST00000487645 GAGE12BA1L429 117 aa9.45□□□□□ -0.9
COL4A6-207ENST00000487645 XKRY2A2RUG3 117 aa9.45□□□□□ -0.9
COL4A6-207ENST00000487645 C3orf84H3BNL1 204 aa9.45□□□□□ -0.9
COL4A6-207ENST00000487645 GAGE7O76087 117 aa9.45□□□□□ -0.9
COL4A6-207ENST00000487645 SFTA3P0C7M3 94 aa9.45□□□□□ -0.9
COL4A6-207ENST00000487645 GAGE12FP0CL80 117 aa9.45□□□□□ -0.9
COL4A6-207ENST00000487645 GAGE12GP0CL81 117 aa9.45□□□□□ -0.9
COL4A6-207ENST00000487645 GAGE12IP0CL82 117 aa9.45□□□□□ -0.9
COL4A6-207ENST00000487645 PIK3CD-AS1Q5SR53 167 aa9.45□□□□□ -0.9
COL4A6-207ENST00000487645 Q6ZTC4 211 aa9.45□□□□□ -0.9
COL4A6-207ENST00000487645 OR2D3Q8NGH3 330 aa9.45□□□□□ -0.9
COL4A6-207ENST00000487645 PHLDA1Q8WV24 401 aaPredicted RBP9.45□□□□□ -0.9
COL4A6-207ENST00000487645 NDUFAF3Q9BU61 184 aa9.45□□□□□ -0.9
COL4A6-207ENST00000487645 TMSB15BA0A087X1C1 80 aa9.44□□□□□ -0.9
COL4A6-207ENST00000487645 TRAV10A0A0B4J240 114 aa9.44□□□□□ -0.9
COL4A6-207ENST00000487645 GRIFINA4D1Z8 144 aa9.44□□□□□ -0.9
COL4A6-207ENST00000487645 ARMS2P0C7Q2 107 aa9.44□□□□□ -0.9
COL4A6-207ENST00000487645 MED14OSP0DP75 135 aa9.44□□□□□ -0.9
COL4A6-207ENST00000487645 RPL23P62829 140 aaKnown RBP9.44□□□□□ -0.9
COL4A6-207ENST00000487645 RPL19P84098 196 aaKnown RBP9.44□□□□□ -0.9
COL4A6-207ENST00000487645 COMMD7Q86VX2 200 aa9.44□□□□□ -0.9
COL4A6-207ENST00000487645 RNASE7Q9H1E1 156 aaKnown RBP9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 112.7 ms