RNA–Protein interactions for RNA: ENST00000487633.1

COL4A3-206, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 3

Gene COL4A3, Length 524 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-206ENST00000487633 REG3GQ6UW15 175 aa3.56□□□□□ -1.84
COL4A3-206ENST00000487633 NIT1Q86X76 327 aa3.56□□□□□ -1.84
COL4A3-206ENST00000487633 OR4C5Q8NGB2 326 aa3.56□□□□□ -1.84
COL4A3-206ENST00000487633 ZC2HC1AQ96GY0 325 aa3.56□□□□□ -1.84
COL4A3-206ENST00000487633 C2orf50Q96LR7 162 aa3.56□□□□□ -1.84
COL4A3-206ENST00000487633 MARVELD1Q9BSK0 173 aa3.56□□□□□ -1.84
COL4A3-206ENST00000487633 PSENENQ9NZ42 101 aa3.56□□□□□ -1.84
COL4A3-206ENST00000487633 HIGD1AQ9Y241 93 aa3.56□□□□□ -1.84
COL4A3-206ENST00000487633 LSM5Q9Y4Y9 91 aaKnown RBP3.56□□□□□ -1.84
COL4A3-206ENST00000487633 IGKV2-40A0A087WW87 121 aaPredicted RBP3.55□□□□□ -1.84
COL4A3-206ENST00000487633 TRAV8-1A0A0A6YYK1 113 aa3.55□□□□□ -1.84
COL4A3-206ENST00000487633 SIX6O95475 246 aa3.55□□□□□ -1.84
COL4A3-206ENST00000487633 IGKV2D-40P01614 121 aaPredicted RBP3.55□□□□□ -1.84
COL4A3-206ENST00000487633 HLA-DQA1P01909 254 aa3.55□□□□□ -1.84
COL4A3-206ENST00000487633 MBPP02686 304 aaPredicted RBP3.55□□□□□ -1.84
COL4A3-206ENST00000487633 FABP1P07148 127 aa3.55□□□□□ -1.84
COL4A3-206ENST00000487633 METTL15P1P0C7V9 234 aa3.55□□□□□ -1.84
COL4A3-206ENST00000487633 LINC00869P0C866 280 aa3.55□□□□□ -1.84
COL4A3-206ENST00000487633 CAV2P51636 162 aa3.55□□□□□ -1.84
COL4A3-206ENST00000487633 CYCSP99999 105 aaKnown RBP3.55□□□□□ -1.84
COL4A3-206ENST00000487633 AKR1C1Q04828 323 aa3.55□□□□□ -1.84
COL4A3-206ENST00000487633 VWC2Q2TAL6 325 aa3.55□□□□□ -1.84
COL4A3-206ENST00000487633 FAM122CQ6P4D5 195 aa3.55□□□□□ -1.84
COL4A3-206ENST00000487633 CYP2G1PQ6ZSU1 146 aa3.55□□□□□ -1.84
COL4A3-206ENST00000487633 BPIFCQ8NFQ6 507 aa3.55□□□□□ -1.84
COL4A3-206ENST00000487633 Q8TAT8 98 aa3.55□□□□□ -1.84
COL4A3-206ENST00000487633 SMIM8Q96KF7 97 aa3.55□□□□□ -1.84
COL4A3-206ENST00000487633 ARPC5LQ9BPX5 153 aa3.55□□□□□ -1.84
COL4A3-206ENST00000487633 SAMD10Q9BYL1 202 aa3.55□□□□□ -1.84
COL4A3-206ENST00000487633 MGAT4CQ9UBM8 478 aa3.55□□□□□ -1.84
COL4A3-206ENST00000487633 BOLA1Q9Y3E2 137 aa3.55□□□□□ -1.84
COL4A3-206ENST00000487633 C7orf66A4D0T2 115 aa3.54□□□□□ -1.84
COL4A3-206ENST00000487633 GAGE12JA6NER3 117 aa3.54□□□□□ -1.84
COL4A3-206ENST00000487633 K7EPK0 472 aa3.54□□□□□ -1.84
COL4A3-206ENST00000487633 TSC22D2O75157 780 aa3.54□□□□□ -1.84
COL4A3-206ENST00000487633 HYPMO75409 117 aa3.54□□□□□ -1.84
COL4A3-206ENST00000487633 NDUFB4O95168 129 aa3.54□□□□□ -1.84
COL4A3-206ENST00000487633 GPX1P07203 203 aa3.54□□□□□ -1.84
COL4A3-206ENST00000487633 PFN1P07737 140 aaKnown RBP3.54□□□□□ -1.84
COL4A3-206ENST00000487633 CRISP2P16562 243 aa3.54□□□□□ -1.84
COL4A3-206ENST00000487633 TAS2R30P59541 319 aa3.54□□□□□ -1.84
COL4A3-206ENST00000487633 PLP1P60201 277 aa3.54□□□□□ -1.84
COL4A3-206ENST00000487633 RRAS2P62070 204 aaPredicted RBP3.54□□□□□ -1.84
COL4A3-206ENST00000487633 GAGE1Q13065 139 aa3.54□□□□□ -1.84
COL4A3-206ENST00000487633 GAGE4Q13068 117 aa3.54□□□□□ -1.84
COL4A3-206ENST00000487633 GAGE5Q13069 117 aa3.54□□□□□ -1.84
COL4A3-206ENST00000487633 TMEM183BQ1AE95 376 aa3.54□□□□□ -1.84
COL4A3-206ENST00000487633 LRRC37A5PQ49AS3 106 aa3.54□□□□□ -1.84
COL4A3-206ENST00000487633 GAGE13Q4V321 117 aa3.54□□□□□ -1.84
COL4A3-206ENST00000487633 LCE2CQ5TA81 110 aa3.54□□□□□ -1.84
COL4A3-206ENST00000487633 LCN15Q6UWW0 184 aa3.54□□□□□ -1.84
COL4A3-206ENST00000487633 STX12Q86Y82 276 aa3.54□□□□□ -1.84
COL4A3-206ENST00000487633 TMEM183AQ8IXX5 376 aa3.54□□□□□ -1.84
COL4A3-206ENST00000487633 DPH3Q96FX2 82 aa3.54□□□□□ -1.84
COL4A3-206ENST00000487633 SLC50A1Q9BRV3 221 aa3.54□□□□□ -1.84
COL4A3-206ENST00000487633 ARL6Q9H0F7 186 aa3.54□□□□□ -1.84
COL4A3-206ENST00000487633 MED28Q9H204 178 aa3.54□□□□□ -1.84
COL4A3-206ENST00000487633 ARV1Q9H2C2 271 aa3.54□□□□□ -1.84
COL4A3-206ENST00000487633 ALG5Q9Y673 324 aa3.54□□□□□ -1.84
COL4A3-206ENST00000487633 SSPOA2VEC9 5147 aa3.53□□□□□ -1.84
COL4A3-206ENST00000487633 FAM24AA6NFZ4 105 aa3.53□□□□□ -1.84
COL4A3-206ENST00000487633 ZNF253O75346 499 aa3.53□□□□□ -1.84
COL4A3-206ENST00000487633 CST7O76096 145 aa3.53□□□□□ -1.84
COL4A3-206ENST00000487633 PET100P0DJ07 73 aa3.53□□□□□ -1.84
COL4A3-206ENST00000487633 RAP2BP61225 183 aa3.53□□□□□ -1.84
COL4A3-206ENST00000487633 HBG1P69891 147 aa3.53□□□□□ -1.84
COL4A3-206ENST00000487633 HBG2P69892 147 aa3.53□□□□□ -1.84
COL4A3-206ENST00000487633 RAB31Q13636 194 aa3.53□□□□□ -1.84
COL4A3-206ENST00000487633 RAB32Q13637 225 aa3.53□□□□□ -1.84
COL4A3-206ENST00000487633 CFAP126Q5VTH2 177 aa3.53□□□□□ -1.84
COL4A3-206ENST00000487633 DGAT2L7PQ6IED9 249 aa3.53□□□□□ -1.84
COL4A3-206ENST00000487633 TMEM14EPQ6UXP3 125 aa3.53□□□□□ -1.84
COL4A3-206ENST00000487633 LINC00305Q7Z4B0 112 aa3.53□□□□□ -1.84
COL4A3-206ENST00000487633 SH2D6Q7Z4S9 175 aa3.53□□□□□ -1.84
COL4A3-206ENST00000487633 EXOC3-AS1Q8N2X6 119 aa3.53□□□□□ -1.84
COL4A3-206ENST00000487633 PRSS3P2Q8NHM4 247 aa3.53□□□□□ -1.84
COL4A3-206ENST00000487633 NMES1Q9C002 83 aa3.53□□□□□ -1.84
COL4A3-206ENST00000487633 COX11Q9Y6N1 276 aa3.53□□□□□ -1.84
COL4A3-206ENST00000487633 CFDP00746 253 aaPredicted RBP3.52□□□□□ -1.85
COL4A3-206ENST00000487633 OR10J4P0C629 311 aa3.52□□□□□ -1.85
COL4A3-206ENST00000487633 CXCL2P19875 107 aa3.52□□□□□ -1.85
COL4A3-206ENST00000487633 S100A7P31151 101 aa3.52□□□□□ -1.85
COL4A3-206ENST00000487633 S100A11P31949 105 aa3.52□□□□□ -1.85
COL4A3-206ENST00000487633 SULT1A1P50225 295 aa3.52□□□□□ -1.85
COL4A3-206ENST00000487633 H2BFSP57053 126 aa3.52□□□□□ -1.85
COL4A3-206ENST00000487633 SLC38A11Q08AI6 406 aa3.52□□□□□ -1.85
COL4A3-206ENST00000487633 THAP6Q8TBB0 222 aa3.52□□□□□ -1.85
COL4A3-206ENST00000487633 C7orf33Q8WU49 177 aa3.52□□□□□ -1.85
COL4A3-206ENST00000487633 PPP1R1CQ8WVI7 109 aa3.52□□□□□ -1.85
COL4A3-206ENST00000487633 RMI2Q96E14 147 aa3.52□□□□□ -1.85
COL4A3-206ENST00000487633 GGACTQ9BVM4 153 aa3.52□□□□□ -1.85
COL4A3-206ENST00000487633 NPVFQ9HCQ7 196 aa3.52□□□□□ -1.85
COL4A3-206ENST00000487633 LYRM2Q9NU23 88 aaPredicted RBP3.52□□□□□ -1.85
COL4A3-206ENST00000487633 UQCC1Q9NVA1 299 aa3.52□□□□□ -1.85
COL4A3-206ENST00000487633 IGKV2-24A0A0C4DH68 120 aa3.51□□□□□ -1.85
COL4A3-206ENST00000487633 TRBV6-4A0A1B0GX49 114 aa3.51□□□□□ -1.85
COL4A3-206ENST00000487633 IGSF23A1L1A6 192 aa3.51□□□□□ -1.85
COL4A3-206ENST00000487633 FBLL1A6NHQ2 334 aaKnown RBP3.51□□□□□ -1.85
COL4A3-206ENST00000487633 MPC2O95563 127 aa3.51□□□□□ -1.85
COL4A3-206ENST00000487633 TYMSP04818 313 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms