RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 TMEM95Q3KNT9 176 aa9.15□□□□□ -0.95
TRA2B-214ENST00000487615 F6UB75 175 aa9.14□□□□□ -0.95
TRA2B-214ENST00000487615 MYCNOSP40205 109 aa9.14□□□□□ -0.95
TRA2B-214ENST00000487615 MAJINQ3KP22 176 aa9.14□□□□□ -0.95
TRA2B-214ENST00000487615 TRIOO75962 3097 aa9.14□□□□□ -0.95
TRA2B-214ENST00000487615 H7C2G1 150 aa9.14□□□□□ -0.95
TRA2B-214ENST00000487615 CD300EQ496F6 205 aaPredicted RBP9.14□□□□□ -0.95
TRA2B-214ENST00000487615 VPREB3Q9UKI3 123 aa9.14□□□□□ -0.95
TRA2B-214ENST00000487615 ZNF815PA8K554 130 aa9.13□□□□□ -0.95
TRA2B-214ENST00000487615 IGHG2P01859 326 aa9.13□□□□□ -0.95
TRA2B-214ENST00000487615 ZNF876PQ49A33 203 aa9.13□□□□□ -0.95
TRA2B-214ENST00000487615 TCTEX1D4Q5JR98 221 aa9.13□□□□□ -0.95
TRA2B-214ENST00000487615 DEFB104AQ8WTQ1 72 aa9.13□□□□□ -0.95
TRA2B-214ENST00000487615 NRGNQ92686 78 aa9.13□□□□□ -0.95
TRA2B-214ENST00000487615 MRPL16Q9NX20 251 aaKnown RBP9.13□□□□□ -0.95
TRA2B-214ENST00000487615 ZNF415Q09FC8 603 aa9.13□□□□□ -0.95
TRA2B-214ENST00000487615 AJUBAQ96IF1 538 aa9.13□□□□□ -0.95
TRA2B-214ENST00000487615 SMIM2Q9BVW6 85 aa9.13□□□□□ -0.95
TRA2B-214ENST00000487615 MSRB1Q9NZV6 116 aa9.13□□□□□ -0.95
TRA2B-214ENST00000487615 MYO9AB2RTY4 2548 aa9.13□□□□□ -0.95
TRA2B-214ENST00000487615 PRB1P04280 392 aa9.13□□□□□ -0.95
TRA2B-214ENST00000487615 CDKN1BP46527 198 aa9.13□□□□□ -0.95
TRA2B-214ENST00000487615 BCL6BQ8N143 479 aaPredicted RBP9.13□□□□□ -0.95
TRA2B-214ENST00000487615 LINC01548A6NM66 108 aa9.12□□□□□ -0.95
TRA2B-214ENST00000487615 CIRBPQ14011 172 aaKnown RBP9.12□□□□□ -0.95
TRA2B-214ENST00000487615 C2orf66Q6UXQ4 117 aa9.12□□□□□ -0.95
TRA2B-214ENST00000487615 CCDC140Q96MF4 163 aa9.12□□□□□ -0.95
TRA2B-214ENST00000487615 TRGV2A0A075B6R0 118 aa9.12□□□□□ -0.95
TRA2B-214ENST00000487615 HOXA3O43365 443 aaPredicted RBP9.12□□□□□ -0.95
TRA2B-214ENST00000487615 RPL13AP40429 203 aaKnown RBP9.12□□□□□ -0.95
TRA2B-214ENST00000487615 LINC01619G3V211 115 aa9.12□□□□□ -0.95
TRA2B-214ENST00000487615 APOMO95445 188 aa9.12□□□□□ -0.95
TRA2B-214ENST00000487615 COX8AP10176 69 aa9.12□□□□□ -0.95
TRA2B-214ENST00000487615 ZNF124Q15973 351 aa9.12□□□□□ -0.95
TRA2B-214ENST00000487615 LINC00173Q6ZV60 143 aa9.12□□□□□ -0.95
TRA2B-214ENST00000487615 COX6CP09669 75 aa9.11□□□□□ -0.95
TRA2B-214ENST00000487615 CD28P10747 220 aa9.11□□□□□ -0.95
TRA2B-214ENST00000487615 GDF5OSQ5U4N7 250 aa9.11□□□□□ -0.95
TRA2B-214ENST00000487615 IGHV1OR15-1A0A075B7D0 117 aa9.11□□□□□ -0.95
TRA2B-214ENST00000487615 IGHV3-73A0A0B4J1V6 119 aa9.11□□□□□ -0.95
TRA2B-214ENST00000487615 CD5LO43866 347 aa9.11□□□□□ -0.95
TRA2B-214ENST00000487615 CTRLP40313 264 aa9.11□□□□□ -0.95
TRA2B-214ENST00000487615 TET2Q6N021 2002 aaPredicted RBP9.11□□□□□ -0.95
TRA2B-214ENST00000487615 TRAV12-2A0A075B6T6 113 aa9.11□□□□□ -0.95
TRA2B-214ENST00000487615 COTL1Q14019 142 aa9.11□□□□□ -0.95
TRA2B-214ENST00000487615 C9orf47Q6ZRZ4 202 aa9.11□□□□□ -0.95
TRA2B-214ENST00000487615 KLK9Q9UKQ9 250 aa9.11□□□□□ -0.95
TRA2B-214ENST00000487615 COX11Q9Y6N1 276 aa9.11□□□□□ -0.95
TRA2B-214ENST00000487615 SAP30O75446 220 aa9.1□□□□□ -0.95
TRA2B-214ENST00000487615 INSP01308 110 aa9.1□□□□□ -0.95
TRA2B-214ENST00000487615 Q8N6K4 173 aa9.1□□□□□ -0.95
TRA2B-214ENST00000487615 CMC4P56277 68 aaPredicted RBP9.1□□□□□ -0.95
TRA2B-214ENST00000487615 RAI1Q7Z5J4 1906 aaPredicted RBP9.1□□□□□ -0.95
TRA2B-214ENST00000487615 H3BRM9 83 aa9.09□□□□□ -0.95
TRA2B-214ENST00000487615 LGALS1P09382 135 aaKnown RBP9.09□□□□□ -0.95
TRA2B-214ENST00000487615 GATA1P15976 413 aaPredicted RBP9.09□□□□□ -0.95
TRA2B-214ENST00000487615 A6NDX4 124 aa9.09□□□□□ -0.95
TRA2B-214ENST00000487615 UBE2V1Q13404 147 aa9.09□□□□□ -0.95
TRA2B-214ENST00000487615 TRPT1Q86TN4 253 aaKnown RBP9.09□□□□□ -0.95
TRA2B-214ENST00000487615 C20orf78Q9BR46 151 aa9.09□□□□□ -0.95
TRA2B-214ENST00000487615 TP53TG3Q9ULZ0 132 aa9.09□□□□□ -0.95
TRA2B-214ENST00000487615 GNRH2O43555 120 aa9.09□□□□□ -0.95
TRA2B-214ENST00000487615 CIDEAO60543 219 aa9.09□□□□□ -0.95
TRA2B-214ENST00000487615 HOXD3P31249 432 aaPredicted RBP9.09□□□□□ -0.95
TRA2B-214ENST00000487615 UNQ9165/PRO28630Q6UXU0 137 aa9.09□□□□□ -0.95
TRA2B-214ENST00000487615 TMEM101Q96IK0 257 aa9.09□□□□□ -0.95
TRA2B-214ENST00000487615 MEGF9Q9H1U4 602 aa9.09□□□□□ -0.95
TRA2B-214ENST00000487615 SDHAF1A6NFY7 115 aa9.09□□□□□ -0.95
TRA2B-214ENST00000487615 MEIG1Q5JSS6 88 aa9.09□□□□□ -0.95
TRA2B-214ENST00000487615 NAA38Q9BRA0 125 aaKnown RBP9.09□□□□□ -0.95
TRA2B-214ENST00000487615 CHAC1Q9BUX1 264 aa9.09□□□□□ -0.95
TRA2B-214ENST00000487615 TP53TG1Q9Y2A0 90 aa9.09□□□□□ -0.95
TRA2B-214ENST00000487615 MYO18BQ8IUG5 2567 aa9.08□□□□□ -0.96
TRA2B-214ENST00000487615 IGKV3OR2-268A0A0C4DH90 116 aa9.08□□□□□ -0.96
TRA2B-214ENST00000487615 DEFB113Q30KQ7 82 aa9.08□□□□□ -0.96
TRA2B-214ENST00000487615 WNK1Q9H4A3 2382 aa9.08□□□□□ -0.96
TRA2B-214ENST00000487615 USP9YO00507 2555 aaPredicted RBP9.08□□□□□ -0.96
TRA2B-214ENST00000487615 TRBV12-3P01733 135 aa9.08□□□□□ -0.96
TRA2B-214ENST00000487615 KIR3DS1Q14943 382 aa9.08□□□□□ -0.96
TRA2B-214ENST00000487615 NSUN5P1Q3KNT7 163 aa9.08□□□□□ -0.96
TRA2B-214ENST00000487615 LINC01545Q5VT33 79 aa9.08□□□□□ -0.96
TRA2B-214ENST00000487615 MRPL35Q9NZE8 188 aaKnown RBP9.08□□□□□ -0.96
TRA2B-214ENST00000487615 ZNF493Q6ZR52 646 aa9.08□□□□□ -0.96
TRA2B-214ENST00000487615 ZNF80P51504 273 aaPredicted RBP9.07□□□□□ -0.96
TRA2B-214ENST00000487615 SAMD5Q5TGI4 173 aa9.07□□□□□ -0.96
TRA2B-214ENST00000487615 OR5A1Q8NGJ0 315 aa9.07□□□□□ -0.96
TRA2B-214ENST00000487615 ZNF479Q96JC4 524 aa9.07□□□□□ -0.96
TRA2B-214ENST00000487615 DKK2Q9UBU2 259 aa9.07□□□□□ -0.96
TRA2B-214ENST00000487615 K7EMT4 169 aa9.07□□□□□ -0.96
TRA2B-214ENST00000487615 SNCGO76070 127 aa9.07□□□□□ -0.96
TRA2B-214ENST00000487615 EMP1P54849 157 aa9.07□□□□□ -0.96
TRA2B-214ENST00000487615 IGF1P05019 195 aa9.07□□□□□ -0.96
TRA2B-214ENST00000487615 COPS9Q8WXC6 57 aa9.07□□□□□ -0.96
TRA2B-214ENST00000487615 UBE2E2Q96LR5 201 aa9.07□□□□□ -0.96
TRA2B-214ENST00000487615 ZFAND3Q9H8U3 227 aa9.07□□□□□ -0.96
TRA2B-214ENST00000487615 PTPRBP23467 1997 aa9.07□□□□□ -0.96
TRA2B-214ENST00000487615 TRGV1A0A0A0MS02 117 aa9.07□□□□□ -0.96
TRA2B-214ENST00000487615 SPRY2O43597 315 aa9.07□□□□□ -0.96
TRA2B-214ENST00000487615 C2orf70A6NJV1 201 aa9.06□□□□□ -0.96
TRA2B-214ENST00000487615 F8VRH5 84 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms