RNA–Protein interactions for RNA: ENST00000487539.1

CNN3-206, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 739 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-206ENST00000487539 NUP62P37198 522 aaPredicted RBP2.47□□□□□ -2.01
CNN3-206ENST00000487539 TAS2R20P59543 309 aa2.47□□□□□ -2.01
CNN3-206ENST00000487539 ARPC4P59998 168 aa2.47□□□□□ -2.01
CNN3-206ENST00000487539 RPS25P62851 125 aaKnown RBP2.47□□□□□ -2.01
CNN3-206ENST00000487539 SAMD13Q5VXD3 122 aa2.47□□□□□ -2.01
CNN3-206ENST00000487539 C14orf178Q8N769 122 aaPredicted RBP2.47□□□□□ -2.01
CNN3-206ENST00000487539 TMEM80Q96HE8 168 aa2.47□□□□□ -2.01
CNN3-206ENST00000487539 TMEM56-RWDD3S4R434 201 aa2.47□□□□□ -2.01
CNN3-206ENST00000487539 IGLV8-61A0A075B6I0 122 aa2.46□□□□□ -2.02
CNN3-206ENST00000487539 IGHV3-64A0A075B6Q5 118 aa2.46□□□□□ -2.02
CNN3-206ENST00000487539 TRAV4A0A0B4J268 109 aa2.46□□□□□ -2.02
CNN3-206ENST00000487539 SMIM30A4D0T7 59 aa2.46□□□□□ -2.02
CNN3-206ENST00000487539 GPR31O00270 319 aa2.46□□□□□ -2.02
CNN3-206ENST00000487539 MRPS12O15235 138 aaKnown RBP2.46□□□□□ -2.02
CNN3-206ENST00000487539 MPDU1O75352 247 aa2.46□□□□□ -2.02
CNN3-206ENST00000487539 MYL12AP19105 171 aa2.46□□□□□ -2.02
CNN3-206ENST00000487539 LEPP41159 167 aa2.46□□□□□ -2.02
CNN3-206ENST00000487539 GNG2P59768 71 aa2.46□□□□□ -2.02
CNN3-206ENST00000487539 TMEM183BQ1AE95 376 aa2.46□□□□□ -2.02
CNN3-206ENST00000487539 IDNKQ5T6J7 187 aa2.46□□□□□ -2.02
CNN3-206ENST00000487539 TMEM183AQ8IXX5 376 aa2.46□□□□□ -2.02
CNN3-206ENST00000487539 OR4C5Q8NGB2 326 aa2.46□□□□□ -2.02
CNN3-206ENST00000487539 RNASEH2CQ8TDP1 164 aaKnown RBP2.46□□□□□ -2.02
CNN3-206ENST00000487539 C2orf50Q96LR7 162 aa2.46□□□□□ -2.02
CNN3-206ENST00000487539 ZNF2Q9BSG1 426 aaPredicted RBP2.46□□□□□ -2.02
CNN3-206ENST00000487539 FAM107BQ9H098 131 aa2.46□□□□□ -2.02
CNN3-206ENST00000487539 ENY2Q9NPA8 101 aa2.46□□□□□ -2.02
CNN3-206ENST00000487539 POMPQ9Y244 141 aa2.46□□□□□ -2.02
CNN3-206ENST00000487539 RRP15Q9Y3B9 282 aaKnown RBP2.46□□□□□ -2.02
CNN3-206ENST00000487539 V9GY05 133 aa2.46□□□□□ -2.02
CNN3-206ENST00000487539 A0A096LNI7 61 aa2.45□□□□□ -2.02
CNN3-206ENST00000487539 TRBV7-9A0A0J9YWB2 115 aa2.45□□□□□ -2.02
CNN3-206ENST00000487539 EFCAB10A6NFE3 127 aa2.45□□□□□ -2.02
CNN3-206ENST00000487539 H3BRN7 92 aa2.45□□□□□ -2.02
CNN3-206ENST00000487539 PMP2P02689 132 aa2.45□□□□□ -2.02
CNN3-206ENST00000487539 TCRBP04435 133 aa2.45□□□□□ -2.02
CNN3-206ENST00000487539 SLC25A5P05141 298 aaKnown RBP2.45□□□□□ -2.02
CNN3-206ENST00000487539 OR10J4P0C629 311 aa2.45□□□□□ -2.02
CNN3-206ENST00000487539 HSMCR30P0CW71 290 aa2.45□□□□□ -2.02
CNN3-206ENST00000487539 HLA-DMAP28067 261 aa2.45□□□□□ -2.02
CNN3-206ENST00000487539 CBX5P45973 191 aa2.45□□□□□ -2.02
CNN3-206ENST00000487539 ASB16-AS1Q495Z4 193 aa2.45□□□□□ -2.02
CNN3-206ENST00000487539 NMSQ5H8A3 153 aa2.45□□□□□ -2.02
CNN3-206ENST00000487539 LAIR2Q6ISS4 152 aa2.45□□□□□ -2.02
CNN3-206ENST00000487539 PRSS48Q7RTY5 328 aa2.45□□□□□ -2.02
CNN3-206ENST00000487539 OR4D5Q8NGN0 318 aa2.45□□□□□ -2.02
CNN3-206ENST00000487539 OR5H2Q8NGV7 314 aa2.45□□□□□ -2.02
CNN3-206ENST00000487539 LRRC20Q8TCA0 184 aa2.45□□□□□ -2.02
CNN3-206ENST00000487539 MARCH1Q8TCQ1 289 aa2.45□□□□□ -2.02
CNN3-206ENST00000487539 FAM19A4Q96LR4 140 aa2.45□□□□□ -2.02
CNN3-206ENST00000487539 TP53RKQ96S44 253 aa2.45□□□□□ -2.02
CNN3-206ENST00000487539 SAMD10Q9BYL1 202 aa2.45□□□□□ -2.02
CNN3-206ENST00000487539 C20orf85Q9H1P6 137 aa2.45□□□□□ -2.02
CNN3-206ENST00000487539 KMT2DO14686 5537 aa2.44□□□□□ -2.02
CNN3-206ENST00000487539 IGLV1-50A0A075B6I6 118 aa2.44□□□□□ -2.02
CNN3-206ENST00000487539 LOC100130705A0A1B0GUX0 176 aa2.44□□□□□ -2.02
CNN3-206ENST00000487539 METTL21EPA6NDL7 271 aa2.44□□□□□ -2.02
CNN3-206ENST00000487539 C5orf51A6NDU8 294 aa2.44□□□□□ -2.02
CNN3-206ENST00000487539 FAM24AA6NFZ4 105 aa2.44□□□□□ -2.02
CNN3-206ENST00000487539 CRYM-AS1A6NIL9 109 aa2.44□□□□□ -2.02
CNN3-206ENST00000487539 GNRH2O43555 120 aa2.44□□□□□ -2.02
CNN3-206ENST00000487539 LINC00694P0DN24 101 aa2.44□□□□□ -2.02
CNN3-206ENST00000487539 ZNF138P52744 262 aa2.44□□□□□ -2.02
CNN3-206ENST00000487539 SPCS3P61009 180 aa2.44□□□□□ -2.02
CNN3-206ENST00000487539 POLR2GP62487 172 aaKnown RBP eCLIP2.44□□□□□ -2.02
CNN3-206ENST00000487539 TPRXLQ17RH7 258 aa2.44□□□□□ -2.02
CNN3-206ENST00000487539 SP6Q3SY56 376 aa2.44□□□□□ -2.02
CNN3-206ENST00000487539 ETFRF1Q6IPR1 90 aa2.44□□□□□ -2.02
CNN3-206ENST00000487539 ZFAND2AQ8N6M9 145 aa2.44□□□□□ -2.02
CNN3-206ENST00000487539 TRGV9Q99603 122 aa2.44□□□□□ -2.02
CNN3-206ENST00000487539 SHANK2-AS3Q9BTD1 123 aa2.44□□□□□ -2.02
CNN3-206ENST00000487539 AGPAT4-IT1Q9H0P7 198 aa2.44□□□□□ -2.02
CNN3-206ENST00000487539 ZNF331Q9NQX6 463 aaPredicted RBP2.44□□□□□ -2.02
CNN3-206ENST00000487539 EHFQ9NZC4 300 aa2.44□□□□□ -2.02
CNN3-206ENST00000487539 AP4S1Q9Y587 144 aa2.44□□□□□ -2.02
CNN3-206ENST00000487539 IFITM5A6NNB3 132 aa2.43□□□□□ -2.02
CNN3-206ENST00000487539 CEBPZOSA8MTT3 80 aa2.43□□□□□ -2.02
CNN3-206ENST00000487539 H3BQ15 152 aa2.43□□□□□ -2.02
CNN3-206ENST00000487539 OR4E1P0C645 316 aa2.43□□□□□ -2.02
CNN3-206ENST00000487539 CCR6P51684 374 aa2.43□□□□□ -2.02
CNN3-206ENST00000487539 AKR1C2P52895 323 aa2.43□□□□□ -2.02
CNN3-206ENST00000487539 SSTP61278 116 aa2.43□□□□□ -2.02
CNN3-206ENST00000487539 FABP5Q01469 135 aa2.43□□□□□ -2.02
CNN3-206ENST00000487539 TRIM16LQ309B1 348 aa2.43□□□□□ -2.02
CNN3-206ENST00000487539 CLPSL2Q6UWE3 100 aa2.43□□□□□ -2.02
CNN3-206ENST00000487539 PATE2Q6UY27 113 aa2.43□□□□□ -2.02
CNN3-206ENST00000487539 C15orf54Q8N8G6 183 aa2.43□□□□□ -2.02
CNN3-206ENST00000487539 LHFPL5Q8TAF8 219 aa2.43□□□□□ -2.02
CNN3-206ENST00000487539 SUN5Q8TC36 379 aa2.43□□□□□ -2.02
CNN3-206ENST00000487539 ODF3Q96PU9 254 aa2.43□□□□□ -2.02
CNN3-206ENST00000487539 PDCD10Q9BUL8 212 aa2.43□□□□□ -2.02
CNN3-206ENST00000487539 TMEM147Q9BVK8 224 aa2.43□□□□□ -2.02
CNN3-206ENST00000487539 LSM2Q9Y333 95 aaKnown RBP2.43□□□□□ -2.02
CNN3-206ENST00000487539 A0A1W2PNN7 141 aa2.42□□□□□ -2.02
CNN3-206ENST00000487539 M0R2T5 61 aa2.42□□□□□ -2.02
CNN3-206ENST00000487539 M0R3E3 92 aa2.42□□□□□ -2.02
CNN3-206ENST00000487539 GPX1P07203 203 aa2.42□□□□□ -2.02
CNN3-206ENST00000487539 RPL7P18124 248 aaKnown RBP2.42□□□□□ -2.02
CNN3-206ENST00000487539 UBE2MP61081 183 aaKnown RBP2.42□□□□□ -2.02
CNN3-206ENST00000487539 RHOHQ15669 191 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms