RNA–Protein interactions for RNA: ENST00000487496.1

SPEN-205, Transcript of spen family transcriptional repressor, humanhuman

TSL 1 (best)

Gene SPEN, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-205ENST00000487496 TAAR5O14804 337 aa7.91□□□□□ -1.14
SPEN-205ENST00000487496 PAX4O43316 350 aa7.91□□□□□ -1.14
SPEN-205ENST00000487496 CRYBA4P53673 196 aa7.91□□□□□ -1.14
SPEN-205ENST00000487496 SLAQ13239 276 aa7.91□□□□□ -1.14
SPEN-205ENST00000487496 IQCF2Q8IXL9 164 aa7.91□□□□□ -1.14
SPEN-205ENST00000487496 C6orf223Q8N319 242 aa7.91□□□□□ -1.14
SPEN-205ENST00000487496 NDFIP1Q9BT67 221 aa7.91□□□□□ -1.14
SPEN-205ENST00000487496 CYTL1Q9NRR1 136 aa7.91□□□□□ -1.14
SPEN-205ENST00000487496 PRO0255Q9UI72 69 aa7.91□□□□□ -1.14
SPEN-205ENST00000487496 PSG8Q9UQ74 426 aa7.91□□□□□ -1.14
SPEN-205ENST00000487496 HHLA3Q9XRX5 114 aa7.91□□□□□ -1.14
SPEN-205ENST00000487496 MRPS16Q9Y3D3 137 aaKnown RBP7.91□□□□□ -1.14
SPEN-205ENST00000487496 IGHV3-16A0A0C4DH30 117 aa7.9□□□□□ -1.14
SPEN-205ENST00000487496 A0A1W2PRE2 83 aa7.9□□□□□ -1.14
SPEN-205ENST00000487496 SMLR1H3BR10 107 aa7.9□□□□□ -1.14
SPEN-205ENST00000487496 K7EQM0 130 aa7.9□□□□□ -1.14
SPEN-205ENST00000487496 IGLV2-11P01706 119 aa7.9□□□□□ -1.14
SPEN-205ENST00000487496 TYMSP04818 313 aa7.9□□□□□ -1.14
SPEN-205ENST00000487496 ZNF479Q96JC4 524 aa7.9□□□□□ -1.14
SPEN-205ENST00000487496 C8orf49Q96NF6 230 aa7.9□□□□□ -1.14
SPEN-205ENST00000487496 SDF2L1Q9HCN8 221 aa7.9□□□□□ -1.14
SPEN-205ENST00000487496 SFTA3P0C7M3 94 aa7.89□□□□□ -1.15
SPEN-205ENST00000487496 ZNF80P51504 273 aaPredicted RBP7.89□□□□□ -1.15
SPEN-205ENST00000487496 FLI1Q01543 452 aaPredicted RBP7.89□□□□□ -1.15
SPEN-205ENST00000487496 AKR1C8PQ5T2L2 129 aa7.89□□□□□ -1.15
SPEN-205ENST00000487496 PRNTQ86SH4 94 aa7.89□□□□□ -1.15
SPEN-205ENST00000487496 CYB561D1Q8N8Q1 229 aa7.89□□□□□ -1.15
SPEN-205ENST00000487496 TMEM75Q8N9X5 138 aa7.89□□□□□ -1.15
SPEN-205ENST00000487496 KCNS1Q96KK3 526 aa7.89□□□□□ -1.15
SPEN-205ENST00000487496 KRTAP1-5Q9BYS1 174 aa7.89□□□□□ -1.15
SPEN-205ENST00000487496 ICOSQ9Y6W8 199 aa7.89□□□□□ -1.15
SPEN-205ENST00000487496 TRGV4A0A0C4DH28 118 aa7.88□□□□□ -1.15
SPEN-205ENST00000487496 FBLL1A6NHQ2 334 aaKnown RBP7.88□□□□□ -1.15
SPEN-205ENST00000487496 M0R2P5 195 aa7.88□□□□□ -1.15
SPEN-205ENST00000487496 GCGP01275 180 aa7.88□□□□□ -1.15
SPEN-205ENST00000487496 FGF8P55075 233 aaPredicted RBP7.88□□□□□ -1.15
SPEN-205ENST00000487496 TNP2Q05952 138 aa7.88□□□□□ -1.15
SPEN-205ENST00000487496 TTC32Q5I0X7 151 aa7.88□□□□□ -1.15
SPEN-205ENST00000487496 LINC00479Q96M42 142 aa7.88□□□□□ -1.15
SPEN-205ENST00000487496 C11orf21Q9P2W6 132 aa7.88□□□□□ -1.15
SPEN-205ENST00000487496 PKD1P98161 4303 aa7.88□□□□□ -1.15
SPEN-205ENST00000487496 TRAV4A0A0B4J268 109 aa7.87□□□□□ -1.15
SPEN-205ENST00000487496 A0A1W2PPQ1 181 aa7.87□□□□□ -1.15
SPEN-205ENST00000487496 IFNA7P01567 189 aa7.87□□□□□ -1.15
SPEN-205ENST00000487496 PFN1P07737 140 aaKnown RBP7.87□□□□□ -1.15
SPEN-205ENST00000487496 UBE2G2P60604 165 aa7.87□□□□□ -1.15
SPEN-205ENST00000487496 MRPL23Q16540 153 aaKnown RBP7.87□□□□□ -1.15
SPEN-205ENST00000487496 ZFP69Q49AA0 526 aa7.87□□□□□ -1.15
SPEN-205ENST00000487496 SMUG1Q53HV7 270 aa7.87□□□□□ -1.15
SPEN-205ENST00000487496 SAPCD1Q5SSQ6 148 aa7.87□□□□□ -1.15
SPEN-205ENST00000487496 KCNRGQ8N5I3 272 aa7.87□□□□□ -1.15
SPEN-205ENST00000487496 OR4C5Q8NGB2 326 aa7.87□□□□□ -1.15
SPEN-205ENST00000487496 DNAH11Q96DT5 4516 aa7.87□□□□□ -1.15
SPEN-205ENST00000487496 PKHD1P08F94 4074 aa7.87□□□□□ -1.15
SPEN-205ENST00000487496 TRAV34A0A0B4J273 112 aa7.86□□□□□ -1.15
SPEN-205ENST00000487496 MAP1LC3B2A6NCE7 125 aa7.86□□□□□ -1.15
SPEN-205ENST00000487496 FAM74A7A6NL05 159 aa7.86□□□□□ -1.15
SPEN-205ENST00000487496 HMSDA8MTL9 139 aa7.86□□□□□ -1.15
SPEN-205ENST00000487496 K7EQD1 137 aa7.86□□□□□ -1.15
SPEN-205ENST00000487496 ZNF345Q14585 488 aa7.86□□□□□ -1.15
SPEN-205ENST00000487496 LYPD5Q6UWN5 251 aa7.86□□□□□ -1.15
SPEN-205ENST00000487496 NEGR1Q7Z3B1 354 aa7.86□□□□□ -1.15
SPEN-205ENST00000487496 OR11H4Q8NGC9 324 aa7.86□□□□□ -1.15
SPEN-205ENST00000487496 NKX6-2Q9C056 277 aaPredicted RBP7.86□□□□□ -1.15
SPEN-205ENST00000487496 MAP1LC3BQ9GZQ8 125 aa7.86□□□□□ -1.15
SPEN-205ENST00000487496 C9JCJ5 164 aa7.85□□□□□ -1.15
SPEN-205ENST00000487496 PEX7O00628 323 aa7.85□□□□□ -1.15
SPEN-205ENST00000487496 SIVA1O15304 175 aa7.85□□□□□ -1.15
SPEN-205ENST00000487496 NXPH4O95158 308 aa7.85□□□□□ -1.15
SPEN-205ENST00000487496 GYPEP15421 78 aa7.85□□□□□ -1.15
SPEN-205ENST00000487496 FHITP49789 147 aa7.85□□□□□ -1.15
SPEN-205ENST00000487496 PPT1P50897 306 aa7.85□□□□□ -1.15
SPEN-205ENST00000487496 HIST1H2BAQ96A08 127 aa7.85□□□□□ -1.15
SPEN-205ENST00000487496 ARL2-SNX15V9GYD0 113 aa7.85□□□□□ -1.15
SPEN-205ENST00000487496 DYNC1H1Q14204 4646 aaKnown RBP7.85□□□□□ -1.15
SPEN-205ENST00000487496 HERC2O95714 4834 aa7.84□□□□□ -1.15
SPEN-205ENST00000487496 IGKV3D-20A0A0C4DH25 116 aa7.84□□□□□ -1.15
SPEN-205ENST00000487496 A0A0D9SG52 128 aa7.84□□□□□ -1.15
SPEN-205ENST00000487496 ORM1P02763 201 aa7.84□□□□□ -1.15
SPEN-205ENST00000487496 MED14OSP0DP75 135 aa7.84□□□□□ -1.15
SPEN-205ENST00000487496 SRIP30626 198 aa7.84□□□□□ -1.15
SPEN-205ENST00000487496 ZNF876PQ49A33 203 aa7.84□□□□□ -1.15
SPEN-205ENST00000487496 STOML3Q8TAV4 291 aa7.84□□□□□ -1.15
SPEN-205ENST00000487496 PCNPQ8WW12 178 aaKnown RBP7.84□□□□□ -1.15
SPEN-205ENST00000487496 C9orf85Q96MD7 179 aa7.84□□□□□ -1.15
SPEN-205ENST00000487496 PGPEP1Q9NXJ5 209 aa7.84□□□□□ -1.15
SPEN-205ENST00000487496 KIAA1109Q2LD37 5005 aa7.83□□□□□ -1.16
SPEN-205ENST00000487496 FABP5P3A8MUU1 101 aa7.83□□□□□ -1.16
SPEN-205ENST00000487496 SEC11BP0C7V7 166 aa7.83□□□□□ -1.16
SPEN-205ENST00000487496 RNASE3P12724 160 aaKnown RBP7.83□□□□□ -1.16
SPEN-205ENST00000487496 GATA1P15976 413 aaPredicted RBP7.83□□□□□ -1.16
SPEN-205ENST00000487496 BTF3P20290 206 aaKnown RBP7.83□□□□□ -1.16
SPEN-205ENST00000487496 DPPA3Q6W0C5 159 aa7.83□□□□□ -1.16
SPEN-205ENST00000487496 Q86TA4 180 aa7.83□□□□□ -1.16
SPEN-205ENST00000487496 ZNF575Q86XF7 245 aa7.83□□□□□ -1.16
SPEN-205ENST00000487496 ZNF471Q9BX82 626 aaPredicted RBP7.83□□□□□ -1.16
SPEN-205ENST00000487496 LOC100131303A0A0U1RQF7 123 aa7.82□□□□□ -1.16
SPEN-205ENST00000487496 KANTRA0A1W2PQU2 76 aa7.82□□□□□ -1.16
SPEN-205ENST00000487496 PGPEP1LA6NFU8 196 aa7.82□□□□□ -1.16
SPEN-205ENST00000487496 UMAD1C9J7I0 102 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms